FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE3026, 146 aa 1>>>pF1KE3026 146 - 146 aa - 146 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 6.5116+/-0.000537; mu= 7.2052+/- 0.033 mean_var=101.7777+/-20.479, 0's: 0 Z-trim(116.7): 5 B-trim: 0 in 0/52 Lambda= 0.127130 statistics sampled from 17361 (17365) to 17361 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.846), E-opt: 0.2 (0.533), width: 16 Scan time: 2.060 The best scores are: opt bits E(32554) CCDS48035.1 URM1 gene_id:81605|Hs108|chr9 ( 146) 1020 195.9 7.3e-51 CCDS6900.1 URM1 gene_id:81605|Hs108|chr9 ( 101) 533 106.5 4.2e-24 CCDS59148.1 URM1 gene_id:81605|Hs108|chr9 ( 63) 424 86.4 2.9e-18 >>CCDS48035.1 URM1 gene_id:81605|Hs108|chr9 (146 aa) initn: 1020 init1: 1020 opt: 1020 Z-score: 1026.6 bits: 195.9 E(32554): 7.3e-51 Smith-Waterman score: 1020; 100.0% identity (100.0% similar) in 146 aa overlap (1-146:1-146) 10 20 30 40 50 60 pF1KE3 MAAPLSVEVEFGGGAELLFDGIKKHRVTLPGQEEPWDIRNLLIWIKKNLLKERPELFIQG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS48 MAAPLSVEVEFGGGAELLFDGIKKHRVTLPGQEEPWDIRNLLIWIKKNLLKERPELFIQG 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 DSVRPGILVLINDADWELLVSTLGDIPPPAPALAASVGKRWASPQAHIEWLGNPPPHSSP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS48 DSVRPGILVLINDADWELLVSTLGDIPPPAPALAASVGKRWASPQAHIEWLGNPPPHSSP 70 80 90 100 110 120 130 140 pF1KE3 TLRLLESPTPGEEGMGSWGHGSTPPS :::::::::::::::::::::::::: CCDS48 TLRLLESPTPGEEGMGSWGHGSTPPS 130 140 >>CCDS6900.1 URM1 gene_id:81605|Hs108|chr9 (101 aa) initn: 533 init1: 533 opt: 533 Z-score: 546.3 bits: 106.5 E(32554): 4.2e-24 Smith-Waterman score: 533; 100.0% identity (100.0% similar) in 79 aa overlap (1-79:1-79) 10 20 30 40 50 60 pF1KE3 MAAPLSVEVEFGGGAELLFDGIKKHRVTLPGQEEPWDIRNLLIWIKKNLLKERPELFIQG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS69 MAAPLSVEVEFGGGAELLFDGIKKHRVTLPGQEEPWDIRNLLIWIKKNLLKERPELFIQG 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 DSVRPGILVLINDADWELLVSTLGDIPPPAPALAASVGKRWASPQAHIEWLGNPPPHSSP ::::::::::::::::::: CCDS69 DSVRPGILVLINDADWELLGELDYQLQDQDSVLFISTLHGG 70 80 90 100 >>CCDS59148.1 URM1 gene_id:81605|Hs108|chr9 (63 aa) initn: 424 init1: 424 opt: 424 Z-score: 441.3 bits: 86.4 E(32554): 2.9e-18 Smith-Waterman score: 424; 100.0% identity (100.0% similar) in 63 aa overlap (1-63:1-63) 10 20 30 40 50 60 pF1KE3 MAAPLSVEVEFGGGAELLFDGIKKHRVTLPGQEEPWDIRNLLIWIKKNLLKERPELFIQG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS59 MAAPLSVEVEFGGGAELLFDGIKKHRVTLPGQEEPWDIRNLLIWIKKNLLKERPELFIQG 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 DSVRPGILVLINDADWELLVSTLGDIPPPAPALAASVGKRWASPQAHIEWLGNPPPHSSP ::: CCDS59 DSV 146 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 15:42:16 2016 done: Sun Nov 6 15:42:17 2016 Total Scan time: 2.060 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]