FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE3213, 491 aa 1>>>pF1KE3213 491 - 491 aa - 491 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 6.1880+/-0.000897; mu= 13.8646+/- 0.054 mean_var=78.8317+/-16.178, 0's: 0 Z-trim(107.3): 8 B-trim: 187 in 1/51 Lambda= 0.144452 statistics sampled from 9485 (9490) to 9485 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.677), E-opt: 0.2 (0.292), width: 16 Scan time: 3.250 The best scores are: opt bits E(32554) CCDS6699.1 IPPK gene_id:64768|Hs108|chr9 ( 491) 3346 706.9 1.2e-203 >>CCDS6699.1 IPPK gene_id:64768|Hs108|chr9 (491 aa) initn: 3346 init1: 3346 opt: 3346 Z-score: 3769.4 bits: 706.9 E(32554): 1.2e-203 Smith-Waterman score: 3346; 100.0% identity (100.0% similar) in 491 aa overlap (1-491:1-491) 10 20 30 40 50 60 pF1KE3 MEEGKMDENEWGYHGEGNKSLVVAHAQRCVVLRFLKFPPNRKKTSEEIFQHLQNIVDFGK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS66 MEEGKMDENEWGYHGEGNKSLVVAHAQRCVVLRFLKFPPNRKKTSEEIFQHLQNIVDFGK 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 NVMKEFLGENYVHYGEVVQLPLEFVKQLCLKIQSERPESRCDKDLDTLSGYAMCLPNLTR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS66 NVMKEFLGENYVHYGEVVQLPLEFVKQLCLKIQSERPESRCDKDLDTLSGYAMCLPNLTR 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 LQTYRFAEHRPILCVEIKPKCGFIPFSSDVTHEMKHKVCRYCMHQHLKVATGKWKQISKY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS66 LQTYRFAEHRPILCVEIKPKCGFIPFSSDVTHEMKHKVCRYCMHQHLKVATGKWKQISKY 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE3 CPLDLYSGNKQRMHFALKSLLQEAQNNLKIFKNGELIYGCKDARSPVADWSELAHHLKPF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS66 CPLDLYSGNKQRMHFALKSLLQEAQNNLKIFKNGELIYGCKDARSPVADWSELAHHLKPF 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE3 FFPSNGLASGPHCTRAVIRELVHVITRVLLSGSDKGRAGTLSPGLGPQGPRVCEASPFSR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS66 FFPSNGLASGPHCTRAVIRELVHVITRVLLSGSDKGRAGTLSPGLGPQGPRVCEASPFSR 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE3 SLRCQGKNTPERSGLPKGCLLYKTLQVQMLDLLDIEGLYPLYNRVERYLEEFPEERKTLQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS66 SLRCQGKNTPERSGLPKGCLLYKTLQVQMLDLLDIEGLYPLYNRVERYLEEFPEERKTLQ 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE3 IDGPYDEAFYQKLLDLSTEDDGTVAFALTKVQQYRVAMTAKDCSIMIALSPCLQDASSDQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS66 IDGPYDEAFYQKLLDLSTEDDGTVAFALTKVQQYRVAMTAKDCSIMIALSPCLQDASSDQ 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE3 RPVVPSSRSRFAFSVSVLDLDLKPYESIPHQYKLDGKIVNYYSKTVRAKDNAVMSTRFKE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS66 RPVVPSSRSRFAFSVSVLDLDLKPYESIPHQYKLDGKIVNYYSKTVRAKDNAVMSTRFKE 430 440 450 460 470 480 490 pF1KE3 SEDCTLVLHKV ::::::::::: CCDS66 SEDCTLVLHKV 490 491 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 15:45:06 2016 done: Sun Nov 6 15:45:07 2016 Total Scan time: 3.250 Total Display time: -0.010 Function used was FASTA [36.3.4 Apr, 2011]