FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE2313, 625 aa 1>>>pF1KE2313 625 - 625 aa - 625 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 6.3375+/-0.000418; mu= 14.3556+/- 0.026 mean_var=84.2081+/-16.719, 0's: 0 Z-trim(112.3): 44 B-trim: 0 in 0/54 Lambda= 0.139765 statistics sampled from 21154 (21182) to 21154 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.613), E-opt: 0.2 (0.248), width: 16 Scan time: 11.310 The best scores are: opt bits E(85289) XP_005252270 (OMIM: 610404) PREDICTED: recQ-mediat ( 625) 4079 832.8 0 XP_011517336 (OMIM: 610404) PREDICTED: recQ-mediat ( 625) 4079 832.8 0 XP_005252268 (OMIM: 610404) PREDICTED: recQ-mediat ( 625) 4079 832.8 0 XP_016870629 (OMIM: 610404) PREDICTED: recQ-mediat ( 625) 4079 832.8 0 NP_079221 (OMIM: 610404) recQ-mediated genome inst ( 625) 4079 832.8 0 XP_016876266 (OMIM: 614392) PREDICTED: tudor domai ( 744) 198 50.2 3e-05 NP_001139542 (OMIM: 614392) tudor domain-containin ( 744) 198 50.2 3e-05 XP_005266613 (OMIM: 614392) PREDICTED: tudor domai ( 809) 198 50.3 3.2e-05 XP_011533551 (OMIM: 614392) PREDICTED: tudor domai ( 341) 184 47.3 0.00011 NP_001139543 (OMIM: 614392) tudor domain-containin ( 651) 184 47.4 0.00019 NP_110421 (OMIM: 614392) tudor domain-containing p ( 651) 184 47.4 0.00019 XP_011533549 (OMIM: 614392) PREDICTED: tudor domai ( 715) 184 47.4 0.0002 XP_005266617 (OMIM: 614392) PREDICTED: tudor domai ( 716) 184 47.4 0.0002 >>XP_005252270 (OMIM: 610404) PREDICTED: recQ-mediated g (625 aa) initn: 4079 init1: 4079 opt: 4079 Z-score: 4445.8 bits: 832.8 E(85289): 0 Smith-Waterman score: 4079; 99.8% identity (100.0% similar) in 625 aa overlap (1-625:1-625) 10 20 30 40 50 60 pF1KE2 MNVTSIALRAETWLLAAWHVKVPPMWLEACINWIQEENNNVNLSQAQMNKQVFEQWLLTD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 MNVTSIALRAETWLLAAWHVKVPPMWLEACINWIQEENNNVNLSQAQMNKQVFEQWLLTD 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 LRDLEHPLLPDGILEIPKGELNGFYALQINSLVDVSQPAYSQIQKLRGKNTTNDLVTAEA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 LRDLEHPLLPDGILEIPKGELNGFYALQINSLVDVSQPAYSQIQKLRGKNTTNDLVTAEA 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE2 QVTPKPWEAKPSRMLMLQLTDGIVQIQGMEYQPIPILHSDLPPGTKILIYGNISFRLGVL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 QVTPKPWEAKPSRMLMLQLTDGIVQIQGMEYQPIPILHSDLPPGTKILIYGNISFRLGVL 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE2 LLKPENVKVLGGEVDALLEEYAQEKVLARLIGEPDLVVSVIPNNSNENIPRVTDVLDPAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 LLKPENVKVLGGEVDALLEEYAQEKVLARLIGEPDLVVSVIPNNSNENIPRVTDVLDPAL 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE2 GPSDEELLASLDENDELTANNDTSSERCFTTGSSSNTIPTRQSSFEPEFVISPRPKEEPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 GPSDEELLASLDENDELTANNDTSSERCFTTGSSSNTIPTRQSSFEPEFVISPRPKEEPS 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE2 NLSIHVMDGELDDFSLEEALLLEETVQKEQMETKELQPLTFNRNADRSIERFSHNPNTTN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 NLSIHVMDGELDDFSLEEALLLEETVQKEQMETKELQPLTFNRNADRSIERFSHNPNTTN 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE2 NFSLTCKNGNNNWSEKNVSEQMTNEDKSFGCPSVRDQNRSIFSVHCNVPLAHDFTNKEKN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 NFSLTCKNGNNNWSEKNVSEQMTNEDKSFGCPSVRDQNRSIFSVHCNVPLAHDFTNKEKN 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE2 LETDNKIKQTSSSDSHSLNNKILNREVVNYVQKRSSQISNENDCNLQSCSLRSSENSINL ::::::::::::::::::::::::::::::::::.::::::::::::::::::::::::: XP_005 LETDNKIKQTSSSDSHSLNNKILNREVVNYVQKRNSQISNENDCNLQSCSLRSSENSINL 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE2 SIAMDLYSPPFVYLSVLMASKPKEVTTVKVKAFIVTLTGNLSSSGGIWSITAKVSDGTAY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 SIAMDLYSPPFVYLSVLMASKPKEVTTVKVKAFIVTLTGNLSSSGGIWSITAKVSDGTAY 490 500 510 520 530 540 550 560 570 580 590 600 pF1KE2 LDVDFVDEILTSLIGFSVPEMKQSKKDPLQYQKFLEGLQKCQRDLIDLCCLMTISFNPSL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 LDVDFVDEILTSLIGFSVPEMKQSKKDPLQYQKFLEGLQKCQRDLIDLCCLMTISFNPSL 550 560 570 580 590 600 610 620 pF1KE2 SKAMVLALQDVNMEHLENLKKRLNK ::::::::::::::::::::::::: XP_005 SKAMVLALQDVNMEHLENLKKRLNK 610 620 >>XP_011517336 (OMIM: 610404) PREDICTED: recQ-mediated g (625 aa) initn: 4079 init1: 4079 opt: 4079 Z-score: 4445.8 bits: 832.8 E(85289): 0 Smith-Waterman score: 4079; 99.8% identity (100.0% similar) in 625 aa overlap (1-625:1-625) 10 20 30 40 50 60 pF1KE2 MNVTSIALRAETWLLAAWHVKVPPMWLEACINWIQEENNNVNLSQAQMNKQVFEQWLLTD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 MNVTSIALRAETWLLAAWHVKVPPMWLEACINWIQEENNNVNLSQAQMNKQVFEQWLLTD 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 LRDLEHPLLPDGILEIPKGELNGFYALQINSLVDVSQPAYSQIQKLRGKNTTNDLVTAEA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 LRDLEHPLLPDGILEIPKGELNGFYALQINSLVDVSQPAYSQIQKLRGKNTTNDLVTAEA 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE2 QVTPKPWEAKPSRMLMLQLTDGIVQIQGMEYQPIPILHSDLPPGTKILIYGNISFRLGVL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 QVTPKPWEAKPSRMLMLQLTDGIVQIQGMEYQPIPILHSDLPPGTKILIYGNISFRLGVL 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE2 LLKPENVKVLGGEVDALLEEYAQEKVLARLIGEPDLVVSVIPNNSNENIPRVTDVLDPAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 LLKPENVKVLGGEVDALLEEYAQEKVLARLIGEPDLVVSVIPNNSNENIPRVTDVLDPAL 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE2 GPSDEELLASLDENDELTANNDTSSERCFTTGSSSNTIPTRQSSFEPEFVISPRPKEEPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 GPSDEELLASLDENDELTANNDTSSERCFTTGSSSNTIPTRQSSFEPEFVISPRPKEEPS 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE2 NLSIHVMDGELDDFSLEEALLLEETVQKEQMETKELQPLTFNRNADRSIERFSHNPNTTN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 NLSIHVMDGELDDFSLEEALLLEETVQKEQMETKELQPLTFNRNADRSIERFSHNPNTTN 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE2 NFSLTCKNGNNNWSEKNVSEQMTNEDKSFGCPSVRDQNRSIFSVHCNVPLAHDFTNKEKN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 NFSLTCKNGNNNWSEKNVSEQMTNEDKSFGCPSVRDQNRSIFSVHCNVPLAHDFTNKEKN 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE2 LETDNKIKQTSSSDSHSLNNKILNREVVNYVQKRSSQISNENDCNLQSCSLRSSENSINL ::::::::::::::::::::::::::::::::::.::::::::::::::::::::::::: XP_011 LETDNKIKQTSSSDSHSLNNKILNREVVNYVQKRNSQISNENDCNLQSCSLRSSENSINL 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE2 SIAMDLYSPPFVYLSVLMASKPKEVTTVKVKAFIVTLTGNLSSSGGIWSITAKVSDGTAY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 SIAMDLYSPPFVYLSVLMASKPKEVTTVKVKAFIVTLTGNLSSSGGIWSITAKVSDGTAY 490 500 510 520 530 540 550 560 570 580 590 600 pF1KE2 LDVDFVDEILTSLIGFSVPEMKQSKKDPLQYQKFLEGLQKCQRDLIDLCCLMTISFNPSL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 LDVDFVDEILTSLIGFSVPEMKQSKKDPLQYQKFLEGLQKCQRDLIDLCCLMTISFNPSL 550 560 570 580 590 600 610 620 pF1KE2 SKAMVLALQDVNMEHLENLKKRLNK ::::::::::::::::::::::::: XP_011 SKAMVLALQDVNMEHLENLKKRLNK 610 620 >>XP_005252268 (OMIM: 610404) PREDICTED: recQ-mediated g (625 aa) initn: 4079 init1: 4079 opt: 4079 Z-score: 4445.8 bits: 832.8 E(85289): 0 Smith-Waterman score: 4079; 99.8% identity (100.0% similar) in 625 aa overlap (1-625:1-625) 10 20 30 40 50 60 pF1KE2 MNVTSIALRAETWLLAAWHVKVPPMWLEACINWIQEENNNVNLSQAQMNKQVFEQWLLTD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 MNVTSIALRAETWLLAAWHVKVPPMWLEACINWIQEENNNVNLSQAQMNKQVFEQWLLTD 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 LRDLEHPLLPDGILEIPKGELNGFYALQINSLVDVSQPAYSQIQKLRGKNTTNDLVTAEA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 LRDLEHPLLPDGILEIPKGELNGFYALQINSLVDVSQPAYSQIQKLRGKNTTNDLVTAEA 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE2 QVTPKPWEAKPSRMLMLQLTDGIVQIQGMEYQPIPILHSDLPPGTKILIYGNISFRLGVL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 QVTPKPWEAKPSRMLMLQLTDGIVQIQGMEYQPIPILHSDLPPGTKILIYGNISFRLGVL 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE2 LLKPENVKVLGGEVDALLEEYAQEKVLARLIGEPDLVVSVIPNNSNENIPRVTDVLDPAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 LLKPENVKVLGGEVDALLEEYAQEKVLARLIGEPDLVVSVIPNNSNENIPRVTDVLDPAL 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE2 GPSDEELLASLDENDELTANNDTSSERCFTTGSSSNTIPTRQSSFEPEFVISPRPKEEPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 GPSDEELLASLDENDELTANNDTSSERCFTTGSSSNTIPTRQSSFEPEFVISPRPKEEPS 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE2 NLSIHVMDGELDDFSLEEALLLEETVQKEQMETKELQPLTFNRNADRSIERFSHNPNTTN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 NLSIHVMDGELDDFSLEEALLLEETVQKEQMETKELQPLTFNRNADRSIERFSHNPNTTN 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE2 NFSLTCKNGNNNWSEKNVSEQMTNEDKSFGCPSVRDQNRSIFSVHCNVPLAHDFTNKEKN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 NFSLTCKNGNNNWSEKNVSEQMTNEDKSFGCPSVRDQNRSIFSVHCNVPLAHDFTNKEKN 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE2 LETDNKIKQTSSSDSHSLNNKILNREVVNYVQKRSSQISNENDCNLQSCSLRSSENSINL ::::::::::::::::::::::::::::::::::.::::::::::::::::::::::::: XP_005 LETDNKIKQTSSSDSHSLNNKILNREVVNYVQKRNSQISNENDCNLQSCSLRSSENSINL 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE2 SIAMDLYSPPFVYLSVLMASKPKEVTTVKVKAFIVTLTGNLSSSGGIWSITAKVSDGTAY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 SIAMDLYSPPFVYLSVLMASKPKEVTTVKVKAFIVTLTGNLSSSGGIWSITAKVSDGTAY 490 500 510 520 530 540 550 560 570 580 590 600 pF1KE2 LDVDFVDEILTSLIGFSVPEMKQSKKDPLQYQKFLEGLQKCQRDLIDLCCLMTISFNPSL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 LDVDFVDEILTSLIGFSVPEMKQSKKDPLQYQKFLEGLQKCQRDLIDLCCLMTISFNPSL 550 560 570 580 590 600 610 620 pF1KE2 SKAMVLALQDVNMEHLENLKKRLNK ::::::::::::::::::::::::: XP_005 SKAMVLALQDVNMEHLENLKKRLNK 610 620 >>XP_016870629 (OMIM: 610404) PREDICTED: recQ-mediated g (625 aa) initn: 4079 init1: 4079 opt: 4079 Z-score: 4445.8 bits: 832.8 E(85289): 0 Smith-Waterman score: 4079; 99.8% identity (100.0% similar) in 625 aa overlap (1-625:1-625) 10 20 30 40 50 60 pF1KE2 MNVTSIALRAETWLLAAWHVKVPPMWLEACINWIQEENNNVNLSQAQMNKQVFEQWLLTD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 MNVTSIALRAETWLLAAWHVKVPPMWLEACINWIQEENNNVNLSQAQMNKQVFEQWLLTD 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 LRDLEHPLLPDGILEIPKGELNGFYALQINSLVDVSQPAYSQIQKLRGKNTTNDLVTAEA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 LRDLEHPLLPDGILEIPKGELNGFYALQINSLVDVSQPAYSQIQKLRGKNTTNDLVTAEA 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE2 QVTPKPWEAKPSRMLMLQLTDGIVQIQGMEYQPIPILHSDLPPGTKILIYGNISFRLGVL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 QVTPKPWEAKPSRMLMLQLTDGIVQIQGMEYQPIPILHSDLPPGTKILIYGNISFRLGVL 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE2 LLKPENVKVLGGEVDALLEEYAQEKVLARLIGEPDLVVSVIPNNSNENIPRVTDVLDPAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 LLKPENVKVLGGEVDALLEEYAQEKVLARLIGEPDLVVSVIPNNSNENIPRVTDVLDPAL 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE2 GPSDEELLASLDENDELTANNDTSSERCFTTGSSSNTIPTRQSSFEPEFVISPRPKEEPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 GPSDEELLASLDENDELTANNDTSSERCFTTGSSSNTIPTRQSSFEPEFVISPRPKEEPS 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE2 NLSIHVMDGELDDFSLEEALLLEETVQKEQMETKELQPLTFNRNADRSIERFSHNPNTTN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 NLSIHVMDGELDDFSLEEALLLEETVQKEQMETKELQPLTFNRNADRSIERFSHNPNTTN 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE2 NFSLTCKNGNNNWSEKNVSEQMTNEDKSFGCPSVRDQNRSIFSVHCNVPLAHDFTNKEKN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 NFSLTCKNGNNNWSEKNVSEQMTNEDKSFGCPSVRDQNRSIFSVHCNVPLAHDFTNKEKN 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE2 LETDNKIKQTSSSDSHSLNNKILNREVVNYVQKRSSQISNENDCNLQSCSLRSSENSINL ::::::::::::::::::::::::::::::::::.::::::::::::::::::::::::: XP_016 LETDNKIKQTSSSDSHSLNNKILNREVVNYVQKRNSQISNENDCNLQSCSLRSSENSINL 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE2 SIAMDLYSPPFVYLSVLMASKPKEVTTVKVKAFIVTLTGNLSSSGGIWSITAKVSDGTAY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 SIAMDLYSPPFVYLSVLMASKPKEVTTVKVKAFIVTLTGNLSSSGGIWSITAKVSDGTAY 490 500 510 520 530 540 550 560 570 580 590 600 pF1KE2 LDVDFVDEILTSLIGFSVPEMKQSKKDPLQYQKFLEGLQKCQRDLIDLCCLMTISFNPSL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 LDVDFVDEILTSLIGFSVPEMKQSKKDPLQYQKFLEGLQKCQRDLIDLCCLMTISFNPSL 550 560 570 580 590 600 610 620 pF1KE2 SKAMVLALQDVNMEHLENLKKRLNK ::::::::::::::::::::::::: XP_016 SKAMVLALQDVNMEHLENLKKRLNK 610 620 >>NP_079221 (OMIM: 610404) recQ-mediated genome instabil (625 aa) initn: 4079 init1: 4079 opt: 4079 Z-score: 4445.8 bits: 832.8 E(85289): 0 Smith-Waterman score: 4079; 99.8% identity (100.0% similar) in 625 aa overlap (1-625:1-625) 10 20 30 40 50 60 pF1KE2 MNVTSIALRAETWLLAAWHVKVPPMWLEACINWIQEENNNVNLSQAQMNKQVFEQWLLTD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_079 MNVTSIALRAETWLLAAWHVKVPPMWLEACINWIQEENNNVNLSQAQMNKQVFEQWLLTD 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 LRDLEHPLLPDGILEIPKGELNGFYALQINSLVDVSQPAYSQIQKLRGKNTTNDLVTAEA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_079 LRDLEHPLLPDGILEIPKGELNGFYALQINSLVDVSQPAYSQIQKLRGKNTTNDLVTAEA 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE2 QVTPKPWEAKPSRMLMLQLTDGIVQIQGMEYQPIPILHSDLPPGTKILIYGNISFRLGVL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_079 QVTPKPWEAKPSRMLMLQLTDGIVQIQGMEYQPIPILHSDLPPGTKILIYGNISFRLGVL 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE2 LLKPENVKVLGGEVDALLEEYAQEKVLARLIGEPDLVVSVIPNNSNENIPRVTDVLDPAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_079 LLKPENVKVLGGEVDALLEEYAQEKVLARLIGEPDLVVSVIPNNSNENIPRVTDVLDPAL 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE2 GPSDEELLASLDENDELTANNDTSSERCFTTGSSSNTIPTRQSSFEPEFVISPRPKEEPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_079 GPSDEELLASLDENDELTANNDTSSERCFTTGSSSNTIPTRQSSFEPEFVISPRPKEEPS 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE2 NLSIHVMDGELDDFSLEEALLLEETVQKEQMETKELQPLTFNRNADRSIERFSHNPNTTN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_079 NLSIHVMDGELDDFSLEEALLLEETVQKEQMETKELQPLTFNRNADRSIERFSHNPNTTN 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE2 NFSLTCKNGNNNWSEKNVSEQMTNEDKSFGCPSVRDQNRSIFSVHCNVPLAHDFTNKEKN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_079 NFSLTCKNGNNNWSEKNVSEQMTNEDKSFGCPSVRDQNRSIFSVHCNVPLAHDFTNKEKN 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE2 LETDNKIKQTSSSDSHSLNNKILNREVVNYVQKRSSQISNENDCNLQSCSLRSSENSINL ::::::::::::::::::::::::::::::::::.::::::::::::::::::::::::: NP_079 LETDNKIKQTSSSDSHSLNNKILNREVVNYVQKRNSQISNENDCNLQSCSLRSSENSINL 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE2 SIAMDLYSPPFVYLSVLMASKPKEVTTVKVKAFIVTLTGNLSSSGGIWSITAKVSDGTAY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_079 SIAMDLYSPPFVYLSVLMASKPKEVTTVKVKAFIVTLTGNLSSSGGIWSITAKVSDGTAY 490 500 510 520 530 540 550 560 570 580 590 600 pF1KE2 LDVDFVDEILTSLIGFSVPEMKQSKKDPLQYQKFLEGLQKCQRDLIDLCCLMTISFNPSL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_079 LDVDFVDEILTSLIGFSVPEMKQSKKDPLQYQKFLEGLQKCQRDLIDLCCLMTISFNPSL 550 560 570 580 590 600 610 620 pF1KE2 SKAMVLALQDVNMEHLENLKKRLNK ::::::::::::::::::::::::: NP_079 SKAMVLALQDVNMEHLENLKKRLNK 610 620 >>XP_016876266 (OMIM: 614392) PREDICTED: tudor domain-co (744 aa) initn: 243 init1: 191 opt: 198 Z-score: 215.3 bits: 50.2 E(85289): 3e-05 Smith-Waterman score: 220; 28.9% identity (58.2% similar) in 194 aa overlap (16-209:12-169) 10 20 30 40 50 60 pF1KE2 MNVTSIALRAETWLLAAWHVKVPPMWLEACINWIQEENNNVNLSQAQMNKQVFEQWLLTD :.:... .::: . . .. ::: ... : :: XP_016 MAQVAGAALSQAGWYLS--DEGIEACTS--SPDKVNVN--------DIILIALNTD 10 20 30 40 70 80 90 100 110 120 pF1KE2 LRDLEHPLLPDGILEIPKGELNGFYALQINSLVDVSQPAYSQIQKLRGKNTTNDLVTAEA :: . . .::. .: .:... . . : ::::.:. . .: . :. XP_016 LRTIGKKFLPS---DINSGKVEKLEG-----------PCVLQIQKIRNVAAPKD--NEES 50 60 70 80 130 140 150 160 170 180 pF1KE2 QVTPKPWEAKPSRMLMLQLTDGIVQIQGMEYQPIPILHSDLPPGTKILIYGNISFRLGVL :..: ::: ::.::: .. ..:.. . . . :::::. . : .... : : XP_016 QAAP--------RMLRLQMTDGHISCTAVEFSYMSKISLNTPPGTKVKLSGIVDIKNGFL 90 100 110 120 130 140 190 200 210 220 230 240 pF1KE2 LLKPENVKVLGGEVDALLEEYAQEKVLARLIGEPDLVVSVIPNNSNENIPRVTDVLDPAL ::. :. ::::::. :.:.. .. :.. XP_016 LLNDSNTTVLGGEVEHLIEKWELQRSLSKHNRSNIGTEGGPPPFVPFGQKCVSHVQVDSR 150 160 170 180 190 200 >>NP_001139542 (OMIM: 614392) tudor domain-containing pr (744 aa) initn: 243 init1: 191 opt: 198 Z-score: 215.3 bits: 50.2 E(85289): 3e-05 Smith-Waterman score: 220; 28.9% identity (58.2% similar) in 194 aa overlap (16-209:12-169) 10 20 30 40 50 60 pF1KE2 MNVTSIALRAETWLLAAWHVKVPPMWLEACINWIQEENNNVNLSQAQMNKQVFEQWLLTD :.:... .::: . . .. ::: ... : :: NP_001 MAQVAGAALSQAGWYLS--DEGIEACTS--SPDKVNVN--------DIILIALNTD 10 20 30 40 70 80 90 100 110 120 pF1KE2 LRDLEHPLLPDGILEIPKGELNGFYALQINSLVDVSQPAYSQIQKLRGKNTTNDLVTAEA :: . . .::. .: .:... . . : ::::.:. . .: . :. NP_001 LRTIGKKFLPS---DINSGKVEKLEG-----------PCVLQIQKIRNVAAPKD--NEES 50 60 70 80 130 140 150 160 170 180 pF1KE2 QVTPKPWEAKPSRMLMLQLTDGIVQIQGMEYQPIPILHSDLPPGTKILIYGNISFRLGVL :..: ::: ::.::: .. ..:.. . . . :::::. . : .... : : NP_001 QAAP--------RMLRLQMTDGHISCTAVEFSYMSKISLNTPPGTKVKLSGIVDIKNGFL 90 100 110 120 130 140 190 200 210 220 230 240 pF1KE2 LLKPENVKVLGGEVDALLEEYAQEKVLARLIGEPDLVVSVIPNNSNENIPRVTDVLDPAL ::. :. ::::::. :.:.. .. :.. NP_001 LLNDSNTTVLGGEVEHLIEKWELQRSLSKHNRSNIGTEGGPPPFVPFGQKCVSHVQVDSR 150 160 170 180 190 200 >>XP_005266613 (OMIM: 614392) PREDICTED: tudor domain-co (809 aa) initn: 270 init1: 191 opt: 198 Z-score: 214.7 bits: 50.3 E(85289): 3.2e-05 Smith-Waterman score: 220; 28.9% identity (58.2% similar) in 194 aa overlap (16-209:12-169) 10 20 30 40 50 60 pF1KE2 MNVTSIALRAETWLLAAWHVKVPPMWLEACINWIQEENNNVNLSQAQMNKQVFEQWLLTD :.:... .::: . . .. ::: ... : :: XP_005 MAQVAGAALSQAGWYLS--DEGIEACTS--SPDKVNVN--------DIILIALNTD 10 20 30 40 70 80 90 100 110 120 pF1KE2 LRDLEHPLLPDGILEIPKGELNGFYALQINSLVDVSQPAYSQIQKLRGKNTTNDLVTAEA :: . . .::. .: .:... . . : ::::.:. . .: . :. XP_005 LRTIGKKFLPS---DINSGKVEKLEG-----------PCVLQIQKIRNVAAPKD--NEES 50 60 70 80 130 140 150 160 170 180 pF1KE2 QVTPKPWEAKPSRMLMLQLTDGIVQIQGMEYQPIPILHSDLPPGTKILIYGNISFRLGVL :..: ::: ::.::: .. ..:.. . . . :::::. . : .... : : XP_005 QAAP--------RMLRLQMTDGHISCTAVEFSYMSKISLNTPPGTKVKLSGIVDIKNGFL 90 100 110 120 130 140 190 200 210 220 230 240 pF1KE2 LLKPENVKVLGGEVDALLEEYAQEKVLARLIGEPDLVVSVIPNNSNENIPRVTDVLDPAL ::. :. ::::::. :.:.. .. :.. XP_005 LLNDSNTTVLGGEVEHLIEKWELQRSLSKHNRSNIGTEGGPPPFVPFGQKCVSHVQVDSR 150 160 170 180 190 200 >>XP_011533551 (OMIM: 614392) PREDICTED: tudor domain-co (341 aa) initn: 184 init1: 184 opt: 184 Z-score: 205.5 bits: 47.3 E(85289): 0.00011 Smith-Waterman score: 184; 36.8% identity (71.1% similar) in 76 aa overlap (134-209:1-76) 110 120 130 140 150 160 pF1KE2 QKLRGKNTTNDLVTAEAQVTPKPWEAKPSRMLMLQLTDGIVQIQGMEYQPIPILHSDLPP :: ::.::: .. ..:.. . . . :: XP_011 MLRLQMTDGHISCTAVEFSYMSKISLNTPP 10 20 30 170 180 190 200 210 220 pF1KE2 GTKILIYGNISFRLGVLLLKPENVKVLGGEVDALLEEYAQEKVLARLIGEPDLVVSVIPN :::. . : .... : :::. :. ::::::. :.:.. .. :.. XP_011 GTKVKLSGIVDIKNGFLLLNDSNTTVLGGEVEHLIEKWELQRSLSKHNRSNIGTEGGPPP 40 50 60 70 80 90 230 240 250 260 270 280 pF1KE2 NSNENIPRVTDVLDPALGPSDEELLASLDENDELTANNDTSSERCFTTGSSSNTIPTRQS XP_011 FVPFGQKCVSHVQVDSRELDRRKTLQVTMPVKPTNDNDEFEKQRTAAIAEVAKSKETKTF 100 110 120 130 140 150 >>NP_001139543 (OMIM: 614392) tudor domain-containing pr (651 aa) initn: 184 init1: 184 opt: 184 Z-score: 201.0 bits: 47.4 E(85289): 0.00019 Smith-Waterman score: 184; 36.8% identity (71.1% similar) in 76 aa overlap (134-209:1-76) 110 120 130 140 150 160 pF1KE2 QKLRGKNTTNDLVTAEAQVTPKPWEAKPSRMLMLQLTDGIVQIQGMEYQPIPILHSDLPP :: ::.::: .. ..:.. . . . :: NP_001 MLRLQMTDGHISCTAVEFSYMSKISLNTPP 10 20 30 170 180 190 200 210 220 pF1KE2 GTKILIYGNISFRLGVLLLKPENVKVLGGEVDALLEEYAQEKVLARLIGEPDLVVSVIPN :::. . : .... : :::. :. ::::::. :.:.. .. :.. NP_001 GTKVKLSGIVDIKNGFLLLNDSNTTVLGGEVEHLIEKWELQRSLSKHNRSNIGTEGGPPP 40 50 60 70 80 90 230 240 250 260 270 280 pF1KE2 NSNENIPRVTDVLDPALGPSDEELLASLDENDELTANNDTSSERCFTTGSSSNTIPTRQS NP_001 FVPFGQKCVSHVQVDSRELDRRKTLQVTMPVKPTNDNDEFEKQRTAAIAEVAKSKETKTF 100 110 120 130 140 150 625 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 15:45:41 2016 done: Sun Nov 6 15:45:42 2016 Total Scan time: 11.310 Total Display time: 0.100 Function used was FASTA [36.3.4 Apr, 2011]