FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE1845, 361 aa 1>>>pF1KE1845 361 - 361 aa - 361 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 6.8417+/-0.00075; mu= 11.5389+/- 0.046 mean_var=145.3222+/-29.167, 0's: 0 Z-trim(114.0): 12 B-trim: 0 in 0/52 Lambda= 0.106392 statistics sampled from 14545 (14552) to 14545 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.789), E-opt: 0.2 (0.447), width: 16 Scan time: 2.570 The best scores are: opt bits E(32554) CCDS6516.1 CAAP1 gene_id:79886|Hs108|chr9 ( 361) 2341 370.4 1.4e-102 CCDS55299.1 CAAP1 gene_id:79886|Hs108|chr9 ( 216) 1400 225.7 2.9e-59 >>CCDS6516.1 CAAP1 gene_id:79886|Hs108|chr9 (361 aa) initn: 2341 init1: 2341 opt: 2341 Z-score: 1955.2 bits: 370.4 E(32554): 1.4e-102 Smith-Waterman score: 2341; 100.0% identity (100.0% similar) in 361 aa overlap (1-361:1-361) 10 20 30 40 50 60 pF1KE1 MTGKKSSREKRRKRSSQEAAAALAAPDIVPALASGSSGSTSGCGSAGGCGSVSCCGNANF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS65 MTGKKSSREKRRKRSSQEAAAALAAPDIVPALASGSSGSTSGCGSAGGCGSVSCCGNANF 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 SGSVTGGGSGGSCWGGSSVERSERRKRRSTDSSSVSGSLQQETKYILPTLEKELFLAEHS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS65 SGSVTGGGSGGSCWGGSSVERSERRKRRSTDSSSVSGSLQQETKYILPTLEKELFLAEHS 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 DLEEGGLDLTVSLKPVSFYISDKKEMLQQCFCIIGEKKLQKMLPDVLKNCSIEEIKKLCQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS65 DLEEGGLDLTVSLKPVSFYISDKKEMLQQCFCIIGEKKLQKMLPDVLKNCSIEEIKKLCQ 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 EQLELLSEKKILKILEGDNGMDSDMEEEADDGSKMGSDLVSQQDICIDSASSVRENKQPE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS65 EQLELLSEKKILKILEGDNGMDSDMEEEADDGSKMGSDLVSQQDICIDSASSVRENKQPE 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE1 GLELKQGKGEDSDVLSINADAYDSDIEGPCNEEAAAPEAPENTVQSEAGQIDDLEKDIEK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS65 GLELKQGKGEDSDVLSINADAYDSDIEGPCNEEAAAPEAPENTVQSEAGQIDDLEKDIEK 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE1 SVNEILGLAESSPNEPKAATLAVPPPEDVQPSAQQLELLELEMRARAIKALMKAGDIKKP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS65 SVNEILGLAESSPNEPKAATLAVPPPEDVQPSAQQLELLELEMRARAIKALMKAGDIKKP 310 320 330 340 350 360 pF1KE1 A : CCDS65 A >>CCDS55299.1 CAAP1 gene_id:79886|Hs108|chr9 (216 aa) initn: 1400 init1: 1400 opt: 1400 Z-score: 1177.5 bits: 225.7 E(32554): 2.9e-59 Smith-Waterman score: 1400; 100.0% identity (100.0% similar) in 216 aa overlap (146-361:1-216) 120 130 140 150 160 170 pF1KE1 LAEHSDLEEGGLDLTVSLKPVSFYISDKKEMLQQCFCIIGEKKLQKMLPDVLKNCSIEEI :::::::::::::::::::::::::::::: CCDS55 MLQQCFCIIGEKKLQKMLPDVLKNCSIEEI 10 20 30 180 190 200 210 220 230 pF1KE1 KKLCQEQLELLSEKKILKILEGDNGMDSDMEEEADDGSKMGSDLVSQQDICIDSASSVRE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 KKLCQEQLELLSEKKILKILEGDNGMDSDMEEEADDGSKMGSDLVSQQDICIDSASSVRE 40 50 60 70 80 90 240 250 260 270 280 290 pF1KE1 NKQPEGLELKQGKGEDSDVLSINADAYDSDIEGPCNEEAAAPEAPENTVQSEAGQIDDLE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 NKQPEGLELKQGKGEDSDVLSINADAYDSDIEGPCNEEAAAPEAPENTVQSEAGQIDDLE 100 110 120 130 140 150 300 310 320 330 340 350 pF1KE1 KDIEKSVNEILGLAESSPNEPKAATLAVPPPEDVQPSAQQLELLELEMRARAIKALMKAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 KDIEKSVNEILGLAESSPNEPKAATLAVPPPEDVQPSAQQLELLELEMRARAIKALMKAG 160 170 180 190 200 210 360 pF1KE1 DIKKPA :::::: CCDS55 DIKKPA 361 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 15:48:13 2016 done: Sun Nov 6 15:48:13 2016 Total Scan time: 2.570 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]