FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE6664, 283 aa 1>>>pF1KE6664 283 - 283 aa - 283 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.6061+/-0.000909; mu= 12.5364+/- 0.054 mean_var=57.3677+/-11.435, 0's: 0 Z-trim(104.5): 14 B-trim: 32 in 1/49 Lambda= 0.169333 statistics sampled from 7941 (7946) to 7941 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.623), E-opt: 0.2 (0.244), width: 16 Scan time: 1.980 The best scores are: opt bits E(32554) CCDS6509.1 MTAP gene_id:4507|Hs108|chr9 ( 283) 1888 469.6 1.1e-132 CCDS9552.1 PNP gene_id:4860|Hs108|chr14 ( 289) 273 75.1 6.8e-14 >>CCDS6509.1 MTAP gene_id:4507|Hs108|chr9 (283 aa) initn: 1888 init1: 1888 opt: 1888 Z-score: 2495.3 bits: 469.6 E(32554): 1.1e-132 Smith-Waterman score: 1888; 99.6% identity (100.0% similar) in 283 aa overlap (1-283:1-283) 10 20 30 40 50 60 pF1KE6 MASGTTTTAVKIGIIGGTGLDDPEILEGRTEKYVDTPFGKPSDALILGKIKNVDCILLAR :::::::::::::::::::::::::::::::::::::::::::::::::::::::.:::: CCDS65 MASGTTTTAVKIGIIGGTGLDDPEILEGRTEKYVDTPFGKPSDALILGKIKNVDCVLLAR 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 HGRQHTIMPSKVNYQANIWALKEEGCTHVIVTTACGSLREEIQPGDIVIIDQFIDRTTMR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS65 HGRQHTIMPSKVNYQANIWALKEEGCTHVIVTTACGSLREEIQPGDIVIIDQFIDRTTMR 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE6 PQSFYDGSHSCARGVCHIPMAEPFCPKTREVLIETAKKLGLRCHSKGTMVTIEGPRFSSR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS65 PQSFYDGSHSCARGVCHIPMAEPFCPKTREVLIETAKKLGLRCHSKGTMVTIEGPRFSSR 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE6 AESFMFRTWGADVINMTTVPEVVLAKEAGICYASIAMATDYDCWKEHEEAVSVDRVLKTL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS65 AESFMFRTWGADVINMTTVPEVVLAKEAGICYASIAMATDYDCWKEHEEAVSVDRVLKTL 190 200 210 220 230 240 250 260 270 280 pF1KE6 KENANKAKSLLLTTIPQIGSTEWSETLHNLKNMAQFSVLLPRH ::::::::::::::::::::::::::::::::::::::::::: CCDS65 KENANKAKSLLLTTIPQIGSTEWSETLHNLKNMAQFSVLLPRH 250 260 270 280 >>CCDS9552.1 PNP gene_id:4860|Hs108|chr14 (289 aa) initn: 181 init1: 137 opt: 273 Z-score: 362.9 bits: 75.1 E(32554): 6.8e-14 Smith-Waterman score: 273; 27.1% identity (58.8% similar) in 262 aa overlap (11-256:26-283) 10 20 30 40 pF1KE6 MASGTTTTAVKIGIIGGTGLDD--PEILEGRTEKYVDTP-FGK-- ...:: :.:: .. ... : . : : . CCDS95 MENGYTYEDYKNTAEWLLSHTKHRPQVAIICGSGLGGLTDKLTQAQIFDYGEIPNFPRST 10 20 30 40 50 60 50 60 70 80 90 pF1KE6 -PSDA--LILGKIKNVDCILLARHGRQHTI--MPS-KVNYQANIWALKEEGCTHVIVTTA :. : :..: ... :... .:: : .: ::.. . .. : : ..::.: CCDS95 VPGHAGRLVFGFLNGRACVMM--QGRFHMYEGYPLWKVTFPVRVFHLL--GVDTLVVTNA 70 80 90 100 110 100 110 120 130 140 150 pF1KE6 CGSLREEIQPGDIVIIDQFIDRTTMRPQSFYDGSHSCARGVCHIPMAEPFCPKTREVLIE :.: ... :::..: . :. . :. : .. : :.. . :. . CCDS95 AGGLNPKFEVGDIMLIRDHINLPGFSGQNPLRGPNDERFGDRFPAMSDAYDRTMRQRALS 120 130 140 150 160 170 160 170 180 190 200 210 pF1KE6 TAKKLG-LRCHSKGTMVTIEGPRFSSRAESFMFRTWGADVINMTTVPEVVLAKEAGICYA : :..: : ..::.: . :: : . :: ... :::...:.:::::..:.. :. CCDS95 TWKQMGEQRELQEGTYVMVAGPSFETVAECRVLQKLGADAVGMSTVPEVIVARHCGLRVF 180 190 200 210 220 230 220 230 240 250 260 pF1KE6 SIAMATDYDCWK-EHEEAVSVDRVLKTLKENANKAK---SLLLTTIPQIGSTEWSETLHN .... :. : : .. ..:: . :. :.: . :.:...:: CCDS95 GFSLITNKVIMDYESLEKANHEEVLAAGKQAAQKLEQFVSILMASIPLPDKAS 240 250 260 270 280 270 280 pF1KE6 LKNMAQFSVLLPRH 283 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 15:14:00 2016 done: Tue Nov 8 15:14:00 2016 Total Scan time: 1.980 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]