FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE1765, 270 aa 1>>>pF1KE1765 270 - 270 aa - 270 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.7809+/-0.000893; mu= 12.3537+/- 0.054 mean_var=68.2197+/-13.685, 0's: 0 Z-trim(105.1): 20 B-trim: 0 in 0/50 Lambda= 0.155281 statistics sampled from 8234 (8243) to 8234 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.637), E-opt: 0.2 (0.253), width: 16 Scan time: 1.690 The best scores are: opt bits E(32554) CCDS6468.1 IL33 gene_id:90865|Hs108|chr9 ( 270) 1797 411.5 3.1e-115 CCDS83341.1 IL33 gene_id:90865|Hs108|chr9 ( 228) 1044 242.8 1.6e-64 CCDS56563.1 IL33 gene_id:90865|Hs108|chr9 ( 228) 789 185.7 2.6e-47 CCDS56564.1 IL33 gene_id:90865|Hs108|chr9 ( 144) 774 182.3 1.7e-46 >>CCDS6468.1 IL33 gene_id:90865|Hs108|chr9 (270 aa) initn: 1797 init1: 1797 opt: 1797 Z-score: 2182.2 bits: 411.5 E(32554): 3.1e-115 Smith-Waterman score: 1797; 100.0% identity (100.0% similar) in 270 aa overlap (1-270:1-270) 10 20 30 40 50 60 pF1KE1 MKPKMKYSTNKISTAKWKNTASKALCFKLGKSQQKAKEVCPMYFMKLRSGLMIKKEACYF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS64 MKPKMKYSTNKISTAKWKNTASKALCFKLGKSQQKAKEVCPMYFMKLRSGLMIKKEACYF 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 RRETTKRPSLKTGRKHKRHLVLAACQQQSTVECFAFGISGVQKYTRALHDSSITGISPIT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS64 RRETTKRPSLKTGRKHKRHLVLAACQQQSTVECFAFGISGVQKYTRALHDSSITGISPIT 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 EYLASLSTYNDQSITFALEDESYEIYVEDLKKDEKKDKVLLSYYESQHPSNESGDGVDGK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS64 EYLASLSTYNDQSITFALEDESYEIYVEDLKKDEKKDKVLLSYYESQHPSNESGDGVDGK 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 MLMVTLSPTKDFWLHANNKEHSVELHKCEKPLPDQAFFVLHNMHSNCVSFECKTDPGVFI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS64 MLMVTLSPTKDFWLHANNKEHSVELHKCEKPLPDQAFFVLHNMHSNCVSFECKTDPGVFI 190 200 210 220 230 240 250 260 270 pF1KE1 GVKDNHLALIKVDSSENLCTENILFKLSET :::::::::::::::::::::::::::::: CCDS64 GVKDNHLALIKVDSSENLCTENILFKLSET 250 260 270 >>CCDS83341.1 IL33 gene_id:90865|Hs108|chr9 (228 aa) initn: 1044 init1: 1044 opt: 1044 Z-score: 1271.7 bits: 242.8 E(32554): 1.6e-64 Smith-Waterman score: 1423; 84.4% identity (84.4% similar) in 270 aa overlap (1-270:1-228) 10 20 30 40 50 60 pF1KE1 MKPKMKYSTNKISTAKWKNTASKALCFKLGKSQQKAKEVCPMYFMKLRSGLMIKKEACYF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS83 MKPKMKYSTNKISTAKWKNTASKALCFKLGKSQQKAKEVCPMYFMKLRSGLMIKKEACYF 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 RRETTKRPSLKTGRKHKRHLVLAACQQQSTVECFAFGISGVQKYTRALHDSSITGISPIT ::::::::::::: ::::: CCDS83 RRETTKRPSLKTG------------------------------------------ISPIT 70 130 140 150 160 170 180 pF1KE1 EYLASLSTYNDQSITFALEDESYEIYVEDLKKDEKKDKVLLSYYESQHPSNESGDGVDGK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS83 EYLASLSTYNDQSITFALEDESYEIYVEDLKKDEKKDKVLLSYYESQHPSNESGDGVDGK 80 90 100 110 120 130 190 200 210 220 230 240 pF1KE1 MLMVTLSPTKDFWLHANNKEHSVELHKCEKPLPDQAFFVLHNMHSNCVSFECKTDPGVFI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS83 MLMVTLSPTKDFWLHANNKEHSVELHKCEKPLPDQAFFVLHNMHSNCVSFECKTDPGVFI 140 150 160 170 180 190 250 260 270 pF1KE1 GVKDNHLALIKVDSSENLCTENILFKLSET :::::::::::::::::::::::::::::: CCDS83 GVKDNHLALIKVDSSENLCTENILFKLSET 200 210 220 >>CCDS56563.1 IL33 gene_id:90865|Hs108|chr9 (228 aa) initn: 789 init1: 789 opt: 789 Z-score: 963.0 bits: 185.7 E(32554): 2.6e-47 Smith-Waterman score: 1444; 84.4% identity (84.4% similar) in 270 aa overlap (1-270:1-228) 10 20 30 40 50 60 pF1KE1 MKPKMKYSTNKISTAKWKNTASKALCFKLGKSQQKAKEVCPMYFMKLRSGLMIKKEACYF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS56 MKPKMKYSTNKISTAKWKNTASKALCFKLGKSQQKAKEVCPMYFMKLRSGLMIKKEACYF 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 RRETTKRPSLKTGRKHKRHLVLAACQQQSTVECFAFGISGVQKYTRALHDSSITGISPIT :::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS56 RRETTKRPSLKTGRKHKRHLVLAACQQQSTVECFAFGISGVQKYTRALHDSSIT------ 70 80 90 100 110 130 140 150 160 170 180 pF1KE1 EYLASLSTYNDQSITFALEDESYEIYVEDLKKDEKKDKVLLSYYESQHPSNESGDGVDGK :::::::::::::::::::::::: CCDS56 ------------------------------------DKVLLSYYESQHPSNESGDGVDGK 120 130 190 200 210 220 230 240 pF1KE1 MLMVTLSPTKDFWLHANNKEHSVELHKCEKPLPDQAFFVLHNMHSNCVSFECKTDPGVFI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS56 MLMVTLSPTKDFWLHANNKEHSVELHKCEKPLPDQAFFVLHNMHSNCVSFECKTDPGVFI 140 150 160 170 180 190 250 260 270 pF1KE1 GVKDNHLALIKVDSSENLCTENILFKLSET :::::::::::::::::::::::::::::: CCDS56 GVKDNHLALIKVDSSENLCTENILFKLSET 200 210 220 >>CCDS56564.1 IL33 gene_id:90865|Hs108|chr9 (144 aa) initn: 958 init1: 774 opt: 774 Z-score: 948.1 bits: 182.3 E(32554): 1.7e-46 Smith-Waterman score: 774; 99.1% identity (100.0% similar) in 114 aa overlap (157-270:31-144) 130 140 150 160 170 180 pF1KE1 STYNDQSITFALEDESYEIYVEDLKKDEKKDKVLLSYYESQHPSNESGDGVDGKMLMVTL .::::::::::::::::::::::::::::: CCDS56 MKPKMKYSTNKISTAKWKNTASKALCFKLGNKVLLSYYESQHPSNESGDGVDGKMLMVTL 10 20 30 40 50 60 190 200 210 220 230 240 pF1KE1 SPTKDFWLHANNKEHSVELHKCEKPLPDQAFFVLHNMHSNCVSFECKTDPGVFIGVKDNH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS56 SPTKDFWLHANNKEHSVELHKCEKPLPDQAFFVLHNMHSNCVSFECKTDPGVFIGVKDNH 70 80 90 100 110 120 250 260 270 pF1KE1 LALIKVDSSENLCTENILFKLSET :::::::::::::::::::::::: CCDS56 LALIKVDSSENLCTENILFKLSET 130 140 270 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 15:51:46 2016 done: Sun Nov 6 15:51:46 2016 Total Scan time: 1.690 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]