FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE3231, 539 aa 1>>>pF1KE3231 539 - 539 aa - 539 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 7.8668+/-0.000833; mu= 9.5796+/- 0.050 mean_var=202.9287+/-40.742, 0's: 0 Z-trim(114.8): 8 B-trim: 3 in 1/51 Lambda= 0.090033 statistics sampled from 15342 (15350) to 15342 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.781), E-opt: 0.2 (0.472), width: 16 Scan time: 4.200 The best scores are: opt bits E(32554) CCDS6422.1 FBXL6 gene_id:26233|Hs108|chr8 ( 539) 3690 491.7 9.2e-139 CCDS47942.1 FBXL6 gene_id:26233|Hs108|chr8 ( 533) 3627 483.5 2.6e-136 >>CCDS6422.1 FBXL6 gene_id:26233|Hs108|chr8 (539 aa) initn: 3690 init1: 3690 opt: 3690 Z-score: 2604.7 bits: 491.7 E(32554): 9.2e-139 Smith-Waterman score: 3690; 99.8% identity (100.0% similar) in 539 aa overlap (1-539:1-539) 10 20 30 40 50 60 pF1KE3 MAAPASRQVRRRARAAPRPRSAEDWWWDRLAPRGSGYHLLQSDSMLLVLSEPGPARPRAQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS64 MAAPASRQVRRRARAAPRPRSAEDWWWDRLAPRGSGYHLLQSDSMLLVLSEPGPARPRAQ 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 RRASRRTPRQPPRGPSAAAKPKAGLRSEAAAAPAPAPAPTPTPEEGPDAGWGDRIPLEIL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS64 RRASRRTPRQPPRGPSAAAKPKAGLRSEAAAAPAPAPAPTPTPEEGPDAGWGDRIPLEIL 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 VQIFGLLVAADGPMPFLGRAARVCRRWQEAASQPALWHTVTLSSPLVGRPAKGGVKAEKK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS64 VQIFGLLVAADGPMPFLGRAARVCRRWQEAASQPALWHTVTLSSPLVGRPAKGGVKAEKK 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE3 LLASLEWLMPNRFSQLQRLTLIHWKSQVHPVLKLVGECCPRLTFLKLSGCHGVTADALVM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS64 LLASLEWLMPNRFSQLQRLTLIHWKSQVHPVLKLVGECCPRLTFLKLSGCHGVTADALVM 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE3 LAKACCQLHSLDLQHSMVESTAVVSFLEEAGSRMRKLWLTYSSQTTAILGALLGSCCPQL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS64 LAKACCQLHSLDLQHSMVESTAVVSFLEEAGSRMRKLWLTYSSQTTAILGALLGSCCPQL 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE3 QVLEVSTGINRNSIPLQLPVEALQKGCPQLQVLRLLNLMWLPKPPGRGVAPGPGFPSLEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS64 QVLEVSTGINRNSIPLQLPVEALQKGCPQLQVLRLLNLMWLPKPPGRGVAPGPGFPSLEE 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE3 LCLASSTCNFVSNEVLGRLLHGSPNLRLLDLRGCARITPAGLQDLPCRELEQLHLGLYGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS64 LCLASSTCNFVSNEVLGRLLHGSPNLRLLDLRGCARITPAGLQDLPCRELEQLHLGLYGT 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE3 SDRLTLAKEGSPFLTQKWCHTLRELDLSGQGFSEKDLEQALAAFLSTPGGSHPALCSLNL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS64 SDRLTLAKEGSPFLTQKWCHTLRELDLSGQGFSEKDLEQALAAFLSTPGGSHPALCSLNL 430 440 450 460 470 480 490 500 510 520 530 pF1KE3 RGTRVTPSTVSSVISSCPGLLYLNLESCRCLPRGLKRAYRGLEEVQWCLEQLLTSPSPS :::::::::::::::.::::::::::::::::::::::::::::::::::::::::::: CCDS64 RGTRVTPSTVSSVISGCPGLLYLNLESCRCLPRGLKRAYRGLEEVQWCLEQLLTSPSPS 490 500 510 520 530 >>CCDS47942.1 FBXL6 gene_id:26233|Hs108|chr8 (533 aa) initn: 2213 init1: 2213 opt: 3627 Z-score: 2560.6 bits: 483.5 E(32554): 2.6e-136 Smith-Waterman score: 3627; 98.7% identity (98.9% similar) in 539 aa overlap (1-539:1-533) 10 20 30 40 50 60 pF1KE3 MAAPASRQVRRRARAAPRPRSAEDWWWDRLAPRGSGYHLLQSDSMLLVLSEPGPARPRAQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 MAAPASRQVRRRARAAPRPRSAEDWWWDRLAPRGSGYHLLQSDSMLLVLSEPGPARPRAQ 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 RRASRRTPRQPPRGPSAAAKPKAGLRSEAAAAPAPAPAPTPTPEEGPDAGWGDRIPLEIL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 RRASRRTPRQPPRGPSAAAKPKAGLRSEAAAAPAPAPAPTPTPEEGPDAGWGDRIPLEIL 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 VQIFGLLVAADGPMPFLGRAARVCRRWQEAASQPALWHTVTLSSPLVGRPAKGGVKAEKK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 VQIFGLLVAADGPMPFLGRAARVCRRWQEAASQPALWHTVTLSSPLVGRPAKGGVKAEKK 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE3 LLASLEWLMPNRFSQLQRLTLIHWKSQVHPVLKLVGECCPRLTFLKLSGCHGVTADALVM ::::::::::::::::::::::::::: ::::::::::::::::::::::::::: CCDS47 LLASLEWLMPNRFSQLQRLTLIHWKSQ------LVGECCPRLTFLKLSGCHGVTADALVM 190 200 210 220 230 250 260 270 280 290 300 pF1KE3 LAKACCQLHSLDLQHSMVESTAVVSFLEEAGSRMRKLWLTYSSQTTAILGALLGSCCPQL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 LAKACCQLHSLDLQHSMVESTAVVSFLEEAGSRMRKLWLTYSSQTTAILGALLGSCCPQL 240 250 260 270 280 290 310 320 330 340 350 360 pF1KE3 QVLEVSTGINRNSIPLQLPVEALQKGCPQLQVLRLLNLMWLPKPPGRGVAPGPGFPSLEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 QVLEVSTGINRNSIPLQLPVEALQKGCPQLQVLRLLNLMWLPKPPGRGVAPGPGFPSLEE 300 310 320 330 340 350 370 380 390 400 410 420 pF1KE3 LCLASSTCNFVSNEVLGRLLHGSPNLRLLDLRGCARITPAGLQDLPCRELEQLHLGLYGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 LCLASSTCNFVSNEVLGRLLHGSPNLRLLDLRGCARITPAGLQDLPCRELEQLHLGLYGT 360 370 380 390 400 410 430 440 450 460 470 480 pF1KE3 SDRLTLAKEGSPFLTQKWCHTLRELDLSGQGFSEKDLEQALAAFLSTPGGSHPALCSLNL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 SDRLTLAKEGSPFLTQKWCHTLRELDLSGQGFSEKDLEQALAAFLSTPGGSHPALCSLNL 420 430 440 450 460 470 490 500 510 520 530 pF1KE3 RGTRVTPSTVSSVISSCPGLLYLNLESCRCLPRGLKRAYRGLEEVQWCLEQLLTSPSPS :::::::::::::::.::::::::::::::::::::::::::::::::::::::::::: CCDS47 RGTRVTPSTVSSVISGCPGLLYLNLESCRCLPRGLKRAYRGLEEVQWCLEQLLTSPSPS 480 490 500 510 520 530 539 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 04:46:54 2016 done: Sun Nov 6 04:46:54 2016 Total Scan time: 4.200 Total Display time: 0.000 Function used was FASTA [36.3.4 Apr, 2011]