FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE1656, 173 aa 1>>>pF1KE1656 173 - 173 aa - 173 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.3133+/-0.000656; mu= 12.2810+/- 0.039 mean_var=70.5942+/-14.350, 0's: 0 Z-trim(111.1): 83 B-trim: 140 in 2/49 Lambda= 0.152648 statistics sampled from 11988 (12089) to 11988 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.759), E-opt: 0.2 (0.371), width: 16 Scan time: 1.910 The best scores are: opt bits E(32554) CCDS6383.1 PTP4A3 gene_id:11156|Hs108|chr8 ( 173) 1182 268.7 1.3e-72 CCDS4965.1 PTP4A1 gene_id:7803|Hs108|chr6 ( 173) 962 220.3 4.9e-58 CCDS348.1 PTP4A2 gene_id:8073|Hs108|chr1 ( 167) 927 212.5 9.9e-56 CCDS6382.1 PTP4A3 gene_id:11156|Hs108|chr8 ( 148) 761 175.9 9e-45 CCDS59193.1 PTP4A2 gene_id:8073|Hs108|chr1 ( 142) 602 140.9 3e-34 CCDS53292.1 PTP4A2 gene_id:8073|Hs108|chr1 ( 136) 600 140.5 4e-34 >>CCDS6383.1 PTP4A3 gene_id:11156|Hs108|chr8 (173 aa) initn: 1182 init1: 1182 opt: 1182 Z-score: 1417.3 bits: 268.7 E(32554): 1.3e-72 Smith-Waterman score: 1182; 100.0% identity (100.0% similar) in 173 aa overlap (1-173:1-173) 10 20 30 40 50 60 pF1KE1 MARMNRPAPVEVSYKHMRFLITHNPTNATLSTFIEDLKKYGATTVVRVCEVTYDKTPLEK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS63 MARMNRPAPVEVSYKHMRFLITHNPTNATLSTFIEDLKKYGATTVVRVCEVTYDKTPLEK 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 DGITVVDWPFDDGAPPPGKVVEDWLSLVKAKFCEAPGSCVAVHCVAGLGRAPVLVALALI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS63 DGITVVDWPFDDGAPPPGKVVEDWLSLVKAKFCEAPGSCVAVHCVAGLGRAPVLVALALI 70 80 90 100 110 120 130 140 150 160 170 pF1KE1 ESGMKYEDAIQFIRQKRRGAINSKQLTYLEKYRPKQRLRFKDPHTHKTRCCVM ::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS63 ESGMKYEDAIQFIRQKRRGAINSKQLTYLEKYRPKQRLRFKDPHTHKTRCCVM 130 140 150 160 170 >>CCDS4965.1 PTP4A1 gene_id:7803|Hs108|chr6 (173 aa) initn: 978 init1: 962 opt: 962 Z-score: 1155.5 bits: 220.3 E(32554): 4.9e-58 Smith-Waterman score: 962; 79.1% identity (92.4% similar) in 172 aa overlap (1-172:1-172) 10 20 30 40 50 60 pF1KE1 MARMNRPAPVEVSYKHMRFLITHNPTNATLSTFIEDLKKYGATTVVRVCEVTYDKTPLEK ::::::::::::.::.::::::::::::::. :::.:::::.::.:::::.::: : .:: CCDS49 MARMNRPAPVEVTYKNMRFLITHNPTNATLNKFIEELKKYGVTTIVRVCEATYDTTLVEK 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 DGITVVDWPFDDGAPPPGKVVEDWLSLVKAKFCEAPGSCVAVHCVAGLGRAPVLVALALI .:: :.:::::::::: ...:.::::::: :: : :: :.:::::::::::::::::::: CCDS49 EGIHVLDWPFDDGAPPSNQIVDDWLSLVKIKFREEPGCCIAVHCVAGLGRAPVLVALALI 70 80 90 100 110 120 130 140 150 160 170 pF1KE1 ESGMKYEDAIQFIRQKRRGAINSKQLTYLEKYRPKQRLRFKDPHTHKTRCCVM :.:::::::.::::::::::.::::: ::::::::.:::::: . :.. ::. CCDS49 EGGMKYEDAVQFIRQKRRGAFNSKQLLYLEKYRPKMRLRFKDSNGHRNNCCIQ 130 140 150 160 170 >>CCDS348.1 PTP4A2 gene_id:8073|Hs108|chr1 (167 aa) initn: 929 init1: 912 opt: 927 Z-score: 1114.0 bits: 212.5 E(32554): 9.9e-56 Smith-Waterman score: 927; 77.5% identity (92.3% similar) in 169 aa overlap (4-172:1-166) 10 20 30 40 50 60 pF1KE1 MARMNRPAPVEVSYKHMRFLITHNPTNATLSTFIEDLKKYGATTVVRVCEVTYDKTPLEK ::::::::.::..::::::::::::::. : :.:::::.::.::::..::::.:.:: CCDS34 MNRPAPVEISYENMRFLITHNPTNATLNKFTEELKKYGVTTLVRVCDATYDKAPVEK 10 20 30 40 50 70 80 90 100 110 120 pF1KE1 DGITVVDWPFDDGAPPPGKVVEDWLSLVKAKFCEAPGSCVAVHCVAGLGRAPVLVALALI .:: :.:::::::::::...:.:::.:.:.:: : :: :::::::::::::::::::::: CCDS34 EGIHVLDWPFDDGAPPPNQIVDDWLNLLKTKFREEPGCCVAVHCVAGLGRAPVLVALALI 60 70 80 90 100 110 130 140 150 160 170 pF1KE1 ESGMKYEDAIQFIRQKRRGAINSKQLTYLEKYRPKQRLRFKDPHTHKTRCCVM : :::::::.::::::::::.::::: ::::::::.::::.: . : ::: CCDS34 ECGMKYEDAVQFIRQKRRGAFNSKQLLYLEKYRPKMRLRFRDTNGH---CCVQ 120 130 140 150 160 >>CCDS6382.1 PTP4A3 gene_id:11156|Hs108|chr8 (148 aa) initn: 761 init1: 761 opt: 761 Z-score: 917.2 bits: 175.9 E(32554): 9e-45 Smith-Waterman score: 969; 85.5% identity (85.5% similar) in 173 aa overlap (1-173:1-148) 10 20 30 40 50 60 pF1KE1 MARMNRPAPVEVSYKHMRFLITHNPTNATLSTFIEDLKKYGATTVVRVCEVTYDKTPLEK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS63 MARMNRPAPVEVSYKHMRFLITHNPTNATLSTFIEDLKKYGATTVVRVCEVTYDKTPLEK 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 DGITVVDWPFDDGAPPPGKVVEDWLSLVKAKFCEAPGSCVAVHCVAGLGRAPVLVALALI :::::::::::::::::::::::::::::::::::::::::::::::::: CCDS63 DGITVVDWPFDDGAPPPGKVVEDWLSLVKAKFCEAPGSCVAVHCVAGLGR---------- 70 80 90 100 110 130 140 150 160 170 pF1KE1 ESGMKYEDAIQFIRQKRRGAINSKQLTYLEKYRPKQRLRFKDPHTHKTRCCVM :::::::::::::::::::::::::::::::::::::: CCDS63 ---------------KRRGAINSKQLTYLEKYRPKQRLRFKDPHTHKTRCCVM 120 130 140 >>CCDS59193.1 PTP4A2 gene_id:8073|Hs108|chr1 (142 aa) initn: 769 init1: 602 opt: 602 Z-score: 728.3 bits: 140.9 E(32554): 3e-34 Smith-Waterman score: 721; 63.9% identity (78.1% similar) in 169 aa overlap (4-172:1-141) 10 20 30 40 50 60 pF1KE1 MARMNRPAPVEVSYKHMRFLITHNPTNATLSTFIEDLKKYGATTVVRVCEVTYDKTPLEK ::::::::.::..::::::::::::::. : :.:::::.::.::::..::::.:.:: CCDS59 MNRPAPVEISYENMRFLITHNPTNATLNKFTEELKKYGVTTLVRVCDATYDKAPVEK 10 20 30 40 50 70 80 90 100 110 120 pF1KE1 DGITVVDWPFDDGAPPPGKVVEDWLSLVKAKFCEAPGSCVAVHCVAGLGRAPVLVALALI .:: :.:::::::::::...:.:::.:.:.:: : :: :::::::::::: CCDS59 EGIHVLDWPFDDGAPPPNQIVDDWLNLLKTKFREEPGCCVAVHCVAGLGR---------- 60 70 80 90 100 130 140 150 160 170 pF1KE1 ESGMKYEDAIQFIRQKRRGAINSKQLTYLEKYRPKQRLRFKDPHTHKTRCCVM :::::.::::: ::::::::.::::.: . : ::: CCDS59 ---------------KRRGAFNSKQLLYLEKYRPKMRLRFRDTNGH---CCVQ 110 120 130 140 >>CCDS53292.1 PTP4A2 gene_id:8073|Hs108|chr1 (136 aa) initn: 776 init1: 585 opt: 600 Z-score: 726.2 bits: 140.5 E(32554): 4e-34 Smith-Waterman score: 708; 65.1% identity (74.6% similar) in 169 aa overlap (4-172:1-135) 10 20 30 40 50 60 pF1KE1 MARMNRPAPVEVSYKHMRFLITHNPTNATLSTFIEDLKKYGATTVVRVCEVTYDKTPLEK ::::::::.::..::::::::::::::. : :: CCDS53 MNRPAPVEISYENMRFLITHNPTNATLNKFTED------------------------ 10 20 30 70 80 90 100 110 120 pF1KE1 DGITVVDWPFDDGAPPPGKVVEDWLSLVKAKFCEAPGSCVAVHCVAGLGRAPVLVALALI ::::::::::...:.:::.:.:.:: : :: :::::::::::::::::::::: CCDS53 -------WPFDDGAPPPNQIVDDWLNLLKTKFREEPGCCVAVHCVAGLGRAPVLVALALI 40 50 60 70 80 130 140 150 160 170 pF1KE1 ESGMKYEDAIQFIRQKRRGAINSKQLTYLEKYRPKQRLRFKDPHTHKTRCCVM : :::::::.::::::::::.::::: ::::::::.::::.: . : ::: CCDS53 ECGMKYEDAVQFIRQKRRGAFNSKQLLYLEKYRPKMRLRFRDTNGH---CCVQ 90 100 110 120 130 173 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 15:53:05 2016 done: Sun Nov 6 15:53:05 2016 Total Scan time: 1.910 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]