FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE1620, 132 aa 1>>>pF1KE1620 132 - 132 aa - 132 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.0653+/-0.000964; mu= 11.6091+/- 0.058 mean_var=54.4211+/-10.917, 0's: 0 Z-trim(103.3): 27 B-trim: 300 in 1/47 Lambda= 0.173856 statistics sampled from 7311 (7336) to 7311 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.601), E-opt: 0.2 (0.225), width: 16 Scan time: 1.530 The best scores are: opt bits E(32554) CCDS6230.1 FABP4 gene_id:2167|Hs108|chr8 ( 132) 850 221.2 1.5e-58 CCDS6229.1 PMP2 gene_id:5375|Hs108|chr8 ( 132) 587 155.2 1.1e-38 CCDS342.1 FABP3 gene_id:2170|Hs108|chr1 ( 133) 563 149.2 7.1e-37 CCDS5127.1 FABP7 gene_id:2173|Hs108|chr6 ( 132) 505 134.6 1.7e-32 CCDS83121.1 FABP7 gene_id:2173|Hs108|chr6 ( 166) 480 128.4 1.6e-30 CCDS47882.1 FABP12 gene_id:646486|Hs108|chr8 ( 140) 475 127.1 3.3e-30 CCDS6228.1 FABP5 gene_id:2171|Hs108|chr8 ( 135) 468 125.3 1.1e-29 CCDS109.1 RBP7 gene_id:116362|Hs108|chr1 ( 134) 307 85.0 1.5e-17 CCDS3109.1 RBP2 gene_id:5948|Hs108|chr3 ( 134) 295 82.0 1.2e-16 CCDS10301.1 CRABP1 gene_id:1381|Hs108|chr15 ( 137) 280 78.2 1.7e-15 CCDS3110.2 RBP1 gene_id:5947|Hs108|chr3 ( 197) 281 78.5 2e-15 CCDS1152.1 CRABP2 gene_id:1382|Hs108|chr1 ( 138) 260 73.2 5.6e-14 CCDS3712.1 FABP2 gene_id:2169|Hs108|chr4 ( 132) 253 71.4 1.8e-13 CCDS8574.1 RBP5 gene_id:83758|Hs108|chr12 ( 135) 219 62.9 6.8e-11 >>CCDS6230.1 FABP4 gene_id:2167|Hs108|chr8 (132 aa) initn: 850 init1: 850 opt: 850 Z-score: 1164.6 bits: 221.2 E(32554): 1.5e-58 Smith-Waterman score: 850; 100.0% identity (100.0% similar) in 132 aa overlap (1-132:1-132) 10 20 30 40 50 60 pF1KE1 MCDAFVGTWKLVSSENFDDYMKEVGVGFATRKVAGMAKPNMIISVNGDVITIKSESTFKN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS62 MCDAFVGTWKLVSSENFDDYMKEVGVGFATRKVAGMAKPNMIISVNGDVITIKSESTFKN 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 TEISFILGQEFDEVTADDRKVKSTITLDGGVLVHVQKWDGKSTTIKRKREDDKLVVECVM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS62 TEISFILGQEFDEVTADDRKVKSTITLDGGVLVHVQKWDGKSTTIKRKREDDKLVVECVM 70 80 90 100 110 120 130 pF1KE1 KGVTSTRVYERA :::::::::::: CCDS62 KGVTSTRVYERA 130 >>CCDS6229.1 PMP2 gene_id:5375|Hs108|chr8 (132 aa) initn: 585 init1: 571 opt: 587 Z-score: 808.1 bits: 155.2 E(32554): 1.1e-38 Smith-Waterman score: 587; 67.2% identity (88.5% similar) in 131 aa overlap (1-131:1-131) 10 20 30 40 50 60 pF1KE1 MCDAFVGTWKLVSSENFDDYMKEVGVGFATRKVAGMAKPNMIISVNGDVITIKSESTFKN : . :.:::::::::::::::: .:::.::::....:::..::: .::.:::..:::::: CCDS62 MSNKFLGTWKLVSSENFDDYMKALGVGLATRKLGNLAKPTVIISKKGDIITIRTESTFKN 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 TEISFILGQEFDEVTADDRKVKSTITLDGGVLVHVQKWDGKSTTIKRKREDDKLVVECVM ::::: :::::.:.:::.::.:: .::. : : .::.:::: :::::: . :.:.:: : CCDS62 TEISFKLGQEFEETTADNRKTKSIVTLQRGSLNQVQRWDGKETTIKRKLVNGKMVAECKM 70 80 90 100 110 120 130 pF1KE1 KGVTSTRVYERA :::. ::.::. CCDS62 KGVVCTRIYEKV 130 >>CCDS342.1 FABP3 gene_id:2170|Hs108|chr1 (133 aa) initn: 557 init1: 557 opt: 563 Z-score: 775.5 bits: 149.2 E(32554): 7.1e-37 Smith-Waterman score: 563; 64.9% identity (84.7% similar) in 131 aa overlap (1-131:1-131) 10 20 30 40 50 60 pF1KE1 MCDAFVGTWKLVSSENFDDYMKEVGVGFATRKVAGMAKPNMIISVNGDVITIKSESTFKN : :::.::::::.:.::::::: .:::::::.::.:.::. :: :::..:.:..::::: CCDS34 MVDAFLGTWKLVDSKNFDDYMKSLGVGFATRQVASMTKPTTIIEKNGDILTLKTHSTFKN 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 TEISFILGQEFDEVTADDRKVKSTITLDGGVLVHVQKWDGKSTTIKRKREDDKLVVECVM ::::: :: ::::.::::::::: .::::: :::.:::::. ::. :. : ::.. . CCDS34 TEISFKLGVEFDETTADDRKVKSIVTLDGGKLVHLQKWDGQETTLVRELIDGKLILTLTH 70 80 90 100 110 120 130 pF1KE1 KGVTSTRVYERA .. ::.::. CCDS34 GTAVCTRTYEKEA 130 >>CCDS5127.1 FABP7 gene_id:2173|Hs108|chr6 (132 aa) initn: 533 init1: 497 opt: 505 Z-score: 696.9 bits: 134.6 E(32554): 1.7e-32 Smith-Waterman score: 505; 56.8% identity (85.6% similar) in 132 aa overlap (1-132:1-132) 10 20 30 40 50 60 pF1KE1 MCDAFVGTWKLVSSENFDDYMKEVGVGFATRKVAGMAKPNMIISVNGDVITIKSESTFKN : .:: .::::..:.:::.::: .:::::::.:....::..::: .:: ..:.. ::::: CCDS51 MVEAFCATWKLTNSQNFDEYMKALGVGFATRQVGNVTKPTVIISQEGDKVVIRTLSTFKN 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 TEISFILGQEFDEVTADDRKVKSTITLDGGVLVHVQKWDGKSTTIKRKREDDKLVVECVM ::::: ::.::::.:::::. ::...::: :::.:::::: :.. :. .: :.:. .. CCDS51 TEISFQLGEEFDETTADDRNCKSVVSLDGDKLVHIQKWDGKETNFVREIKDGKMVMTLTF 70 80 90 100 110 120 130 pF1KE1 KGVTSTRVYERA :...: ::.: CCDS51 GDVVAVRHYEKA 130 >>CCDS83121.1 FABP7 gene_id:2173|Hs108|chr6 (166 aa) initn: 490 init1: 472 opt: 480 Z-score: 661.4 bits: 128.4 E(32554): 1.6e-30 Smith-Waterman score: 480; 60.3% identity (87.9% similar) in 116 aa overlap (1-116:1-116) 10 20 30 40 50 60 pF1KE1 MCDAFVGTWKLVSSENFDDYMKEVGVGFATRKVAGMAKPNMIISVNGDVITIKSESTFKN : .:: .::::..:.:::.::: .:::::::.:....::..::: .:: ..:.. ::::: CCDS83 MVEAFCATWKLTNSQNFDEYMKALGVGFATRQVGNVTKPTVIISQEGDKVVIRTLSTFKN 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 TEISFILGQEFDEVTADDRKVKSTITLDGGVLVHVQKWDGKSTTIKRKREDDKLVVECVM ::::: ::.::::.:::::. ::...::: :::.:::::: :.. :. .: :.:. CCDS83 TEISFQLGEEFDETTADDRNCKSVVSLDGDKLVHIQKWDGKETNFVREIKDGKMVMVSND 70 80 90 100 110 120 130 pF1KE1 KGVTSTRVYERA CCDS83 NSPFFLVFFSSPHTSHLLPSSSLLLPFFLLPSFFNNTSLARFFNYM 130 140 150 160 >>CCDS47882.1 FABP12 gene_id:646486|Hs108|chr8 (140 aa) initn: 503 init1: 465 opt: 475 Z-score: 655.8 bits: 127.1 E(32554): 3.3e-30 Smith-Waterman score: 475; 55.7% identity (79.4% similar) in 131 aa overlap (1-131:1-131) 10 20 30 40 50 60 pF1KE1 MCDAFVGTWKLVSSENFDDYMKEVGVGFATRKVAGMAKPNMIISVNGDVITIKSESTFKN : : . :::: .: :: .:::::.:.: :.::.. .:::.. ::..:::::::..: ::: CCDS47 MIDQLQGTWKSISCENSEDYMKELGIGRASRKLGRLAKPTVTISTDGDVITIKTKSIFKN 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 TEISFILGQEFDEVTADDRKVKSTITLDGGVLVHVQKWDGKSTTIKRKREDDKLVVECVM .:::: ::.::.:.: .:.:: .::: :..:: :::: ::: :: : :.::: .. CCDS47 NEISFKLGEEFEEITPGGHKTKSKVTLDKESLIQVQDWDGKETTITRKLVDGKMVVESTV 70 80 90 100 110 120 130 pF1KE1 KGVTSTRVYERA ..: ::.::. CCDS47 NSVICTRTYEKVSSNSVSNS 130 140 >>CCDS6228.1 FABP5 gene_id:2171|Hs108|chr8 (135 aa) initn: 467 init1: 443 opt: 468 Z-score: 646.6 bits: 125.3 E(32554): 1.1e-29 Smith-Waterman score: 468; 55.2% identity (85.6% similar) in 125 aa overlap (7-131:9-133) 10 20 30 40 50 pF1KE1 MCDAFVGTWKLVSSENFDDYMKEVGVGFATRKVAGMAKPNMIISVNGDVITIKSESTF : :.::.:..::.::::.:::.: ::...::::. ::. .: .:::.:::. CCDS62 MATVQQLEGRWRLVDSKGFDEYMKELGVGIALRKMGAMAKPDCIITCDGKNLTIKTESTL 10 20 30 40 50 60 60 70 80 90 100 110 pF1KE1 KNTEISFILGQEFDEVTADDRKVKSTITLDGGVLVHVQKWDGKSTTIKRKREDDKLVVEC :.:..: ::..:.:.::: ::.... .. :.::. :.:::: .:: :: .: :::::: CCDS62 KTTQFSCTLGEKFEETTADGRKTQTVCNFTDGALVQHQEWDGKESTITRKLKDGKLVVEC 70 80 90 100 110 120 120 130 pF1KE1 VMKGVTSTRVYERA ::..:: ::.::. CCDS62 VMNNVTCTRIYEKVE 130 >>CCDS109.1 RBP7 gene_id:116362|Hs108|chr1 (134 aa) initn: 313 init1: 236 opt: 307 Z-score: 428.4 bits: 85.0 E(32554): 1.5e-17 Smith-Waterman score: 307; 39.8% identity (68.0% similar) in 128 aa overlap (7-132:7-134) 10 20 30 40 50 60 pF1KE1 MCDAFVGTWKLVSSENFDDYMKEVGVGFATRKVAGMAKPNMIISVNGDVITIKSESTFKN ::: :.::.::. :: .:. :::::.: . ::. .: ::: .::...:...: CCDS10 MPADLSGTWTLLSSDNFEGYMLALGIDFATRKIAKLLKPQKVIEQNGDSFTIHTNSSLRN 10 20 30 40 50 60 70 80 90 100 110 pF1KE1 TEISFILGQEFDEVTA--DDRKVKSTITLDGGVLVHVQKWDGKSTTIKRKREDDKLVVEC ..: .:.:::: . :.:: :: . :. :. .:: . :. . : ::: .: CCDS10 YFVKFKVGEEFDEDNRGLDNRKCKSLVIWDNDRLTCIQKGEKKNRGWTHWIEGDKLHLEM 70 80 90 100 110 120 120 130 pF1KE1 VMKGVTSTRVYERA .: . ....:: CCDS10 FCEGQVCKQTFQRA 130 >>CCDS3109.1 RBP2 gene_id:5948|Hs108|chr3 (134 aa) initn: 277 init1: 211 opt: 295 Z-score: 412.1 bits: 82.0 E(32554): 1.2e-16 Smith-Waterman score: 295; 39.4% identity (66.1% similar) in 127 aa overlap (7-131:7-133) 10 20 30 40 50 60 pF1KE1 MCDAFVGTWKLVSSENFDDYMKEVGVGFATRKVAGMAKPNMIISVNGDVITIKSESTFKN :::.. :.:::. ::: . . :::::.: . .:. .:: . :. :::.: CCDS31 MTRDQNGTWEMESNENFEGYMKALDIDFATRKIAVRLTQTKVIDQDGDNFKTKTTSTFRN 10 20 30 40 50 60 70 80 90 100 110 pF1KE1 TEISFILGQEFDEVTA--DDRKVKSTITLDGGVLVHVQKWDGKSTTIKRKREDDKLVVEC ...: .: :::: : :.:.::. .: .: ::: ::: . .. :. : ::: .: CCDS31 YDVDFTVGVEFDEYTKSLDNRHVKALVTWEGDVLVCVQKGEKENRGWKQWIEGDKLYLEL 70 80 90 100 110 120 120 130 pF1KE1 VMKGVTSTRVYERA . . .:... CCDS31 TCGDQVCRQVFKKK 130 >>CCDS10301.1 CRABP1 gene_id:1381|Hs108|chr15 (137 aa) initn: 265 init1: 137 opt: 280 Z-score: 391.7 bits: 78.2 E(32554): 1.7e-15 Smith-Waterman score: 280; 39.1% identity (63.2% similar) in 133 aa overlap (5-131:4-136) 10 20 30 40 50 pF1KE1 MCDAFVGTWKLVSSENFDDYMKEVGVGFATRKVAGMA--KPNMIISVNGDVITIKSESTF :.::::. ::::::. .: .::. :::: : ::.. : .:: . ::. .: CCDS10 MPNFAGTWKMRSSENFDELLKALGVNAMLRKVAVAAASKPHVEIRQDGDQFYIKTSTTV 10 20 30 40 50 60 70 80 90 100 110 pF1KE1 KNTEISFILGQEFDEVTADDRKVKSTITLDGGVLVHVQKW----DGKSTTIKRKREDDKL ..:::.: .:. :.: :.: :: .: : .. .: . :: .: :. .:.: CCDS10 RTTEINFKVGEGFEEETVDGRKCRSLATWENENKIHCTQTLLEGDGPKTYWTRELANDEL 60 70 80 90 100 110 120 130 pF1KE1 VVECVMKGVTSTRVYERA .. :. ::.: : CCDS10 ILTFGADDVVCTRIYVRE 120 130 132 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 16:06:28 2016 done: Sun Nov 6 16:06:29 2016 Total Scan time: 1.530 Total Display time: -0.030 Function used was FASTA [36.3.4 Apr, 2011]