FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE2784, 325 aa 1>>>pF1KE2784 325 - 325 aa - 325 aa Library: human.CCDS.faa 18921897 residues in 33420 sequences Statistics: Expectation_n fit: rho(ln(x))= 8.9812+/-0.000659; mu= 0.8657+/- 0.040 mean_var=181.5556+/-36.619, 0's: 0 Z-trim(117.3): 5 B-trim: 0 in 0/52 Lambda= 0.095185 statistics sampled from 18232 (18237) to 18232 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.83), E-opt: 0.2 (0.546), width: 16 Scan time: 1.500 The best scores are: opt bits E(33420) CCDS6223.1 ZC2HC1A gene_id:51101|Hs109|chr8 ( 325) 2265 322.2 3.6e-88 CCDS47495.1 ZC2HC1B gene_id:153918|Hs109|chr6 ( 222) 607 94.4 9.1e-20 >>CCDS6223.1 ZC2HC1A gene_id:51101|Hs109|chr8 (325 aa) initn: 2265 init1: 2265 opt: 2265 Z-score: 1696.5 bits: 322.2 E(33420): 3.6e-88 Smith-Waterman score: 2265; 100.0% identity (100.0% similar) in 325 aa overlap (1-325:1-325) 10 20 30 40 50 60 pF1KE2 MEGLEENGGVVQVGELLPCKICGRTFFPVALKKHGPICQKTATKKRKTFDSSRQRAEGTD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS62 MEGLEENGGVVQVGELLPCKICGRTFFPVALKKHGPICQKTATKKRKTFDSSRQRAEGTD 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 IPTVKPLKPRPEPPKKPSNWRRKHEEFIATIRAAKGLDQALKEGGKLPPPPPPSYDPDYI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS62 IPTVKPLKPRPEPPKKPSNWRRKHEEFIATIRAAKGLDQALKEGGKLPPPPPPSYDPDYI 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE2 QCPYCQRRFNENAADRHINFCKEQAARISNKGKFSTDTKGKPTSRTQVYKPPALKKSNSP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS62 QCPYCQRRFNENAADRHINFCKEQAARISNKGKFSTDTKGKPTSRTQVYKPPALKKSNSP 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE2 GTASSGSSRLPQPSGAGKTVVGVPSGKVSSSSSSLGNKLQTLSPSHKGIAAPHAGANVKP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS62 GTASSGSSRLPQPSGAGKTVVGVPSGKVSSSSSSLGNKLQTLSPSHKGIAAPHAGANVKP 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE2 RNSTPPSLARNPAPGVLTNKRKTYTESYIARPDGDCASSLNGGNIKGIEGHSPGNLPKFC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS62 RNSTPPSLARNPAPGVLTNKRKTYTESYIARPDGDCASSLNGGNIKGIEGHSPGNLPKFC 250 260 270 280 290 300 310 320 pF1KE2 HECGTKYPVEWAKFCCECGIRRMIL ::::::::::::::::::::::::: CCDS62 HECGTKYPVEWAKFCCECGIRRMIL 310 320 >>CCDS47495.1 ZC2HC1B gene_id:153918|Hs109|chr6 (222 aa) initn: 633 init1: 594 opt: 607 Z-score: 468.6 bits: 94.4 E(33420): 9.1e-20 Smith-Waterman score: 607; 47.0% identity (68.8% similar) in 215 aa overlap (15-227:14-220) 10 20 30 40 50 60 pF1KE2 MEGLEENGGVVQVGELLPCKICGRTFFPVALKKHGPICQKTATKKRKTFDSSRQRAEGTD ::.::..::: : .:..:::::.: ..::: :.: .:: .::: CCDS47 MAGAEPFLADGNQELFPCEVCGRRFAADVLERHGPICKKLFNRKRKPFSSLKQRLQGTD 10 20 30 40 50 70 80 90 100 110 120 pF1KE2 IPTVKPLKPRPEPPKKPSNWRRKHEEFIATIRAAKGLDQALKEGGKLPPPPPPSYDPDYI ::::: :: . ::::..::.:: .::.:: :.::: :::::::: .:::: CCDS47 IPTVKKTPQSKSPPVRKSNWRQQHEDFINAIRSAKQCMLAIKEGRPLPPPPPPSLNPDYI 60 70 80 90 100 110 130 140 150 160 170 pF1KE2 QCPYCQRRFNENAADRHINFCKEQAAR-ISNKGKFSTDTKGKPTSRTQVYKPPALKKSNS : :::.:::::.::.:: ::::.:..: . : .. : .: .::.: . :: CCDS47 QRPYCMRRFNESAAERHTNFCKDQSSRRVFNPAQ----TAAKLASRAQGRAQMGPKKE-- 120 130 140 150 160 170 180 190 200 210 220 230 pF1KE2 PGTASSGSSRLPQPSGAGKTVVGVPSGKVSSSSSSLGNKL-QTLSPSHKGIAAPHAGANV : ..:. .. : . .. . : . :: . . .: : :: : .: : : CCDS47 PTVTSAVGALLQNRVLVATNEVPTKSGLAMDPAS--GAKLRQGFSKSSKKD 180 190 200 210 220 240 250 260 270 280 290 pF1KE2 KPRNSTPPSLARNPAPGVLTNKRKTYTESYIARPDGDCASSLNGGNIKGIEGHSPGNLPK 325 residues in 1 query sequences 18921897 residues in 33420 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Fri Feb 19 20:39:47 2021 done: Fri Feb 19 20:39:47 2021 Total Scan time: 1.500 Total Display time: 0.030 Function used was FASTA [36.3.4 Apr, 2011]