FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE1645, 160 aa 1>>>pF1KE1645 160 - 160 aa - 160 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.2076+/-0.000831; mu= 11.8094+/- 0.050 mean_var=52.4121+/-10.550, 0's: 0 Z-trim(105.1): 18 B-trim: 21 in 1/48 Lambda= 0.177157 statistics sampled from 8225 (8233) to 8225 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.647), E-opt: 0.2 (0.253), width: 16 Scan time: 1.390 The best scores are: opt bits E(32554) CCDS6216.1 LY96 gene_id:23643|Hs108|chr8 ( 160) 1072 281.7 1.3e-76 CCDS56540.1 LY96 gene_id:23643|Hs108|chr8 ( 130) 615 164.8 1.6e-41 >>CCDS6216.1 LY96 gene_id:23643|Hs108|chr8 (160 aa) initn: 1072 init1: 1072 opt: 1072 Z-score: 1488.6 bits: 281.7 E(32554): 1.3e-76 Smith-Waterman score: 1072; 99.4% identity (99.4% similar) in 160 aa overlap (1-160:1-160) 10 20 30 40 50 60 pF1KE1 MLPFLFFSTLFSSIFTEAQKQYWVCNSSDASISYTYCDKMQYPISINVNPCIELKGSKGL ::::::::::::::::::::::::::::::::::::::::::::::::::::::: :::: CCDS62 MLPFLFFSTLFSSIFTEAQKQYWVCNSSDASISYTYCDKMQYPISINVNPCIELKRSKGL 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 LHIFYIPRRDLKQLYFNLYITVNTMNLPKRKEVICRGSDDDYSFCRALKGETVNTTISFS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS62 LHIFYIPRRDLKQLYFNLYITVNTMNLPKRKEVICRGSDDDYSFCRALKGETVNTTISFS 70 80 90 100 110 120 130 140 150 160 pF1KE1 FKGIKFSKGKYKCVVEAISGSPEEMLFCLEFVILHQPNSN :::::::::::::::::::::::::::::::::::::::: CCDS62 FKGIKFSKGKYKCVVEAISGSPEEMLFCLEFVILHQPNSN 130 140 150 160 >>CCDS56540.1 LY96 gene_id:23643|Hs108|chr8 (130 aa) initn: 856 init1: 615 opt: 615 Z-score: 858.9 bits: 164.8 E(32554): 1.6e-41 Smith-Waterman score: 797; 80.6% identity (80.6% similar) in 160 aa overlap (1-160:1-130) 10 20 30 40 50 60 pF1KE1 MLPFLFFSTLFSSIFTEAQKQYWVCNSSDASISYTYCDKMQYPISINVNPCIELKGSKGL ::::::::::::::::::::::::::::::::::::: CCDS56 MLPFLFFSTLFSSIFTEAQKQYWVCNSSDASISYTYCG---------------------- 10 20 30 70 80 90 100 110 120 pF1KE1 LHIFYIPRRDLKQLYFNLYITVNTMNLPKRKEVICRGSDDDYSFCRALKGETVNTTISFS :::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS56 --------RDLKQLYFNLYITVNTMNLPKRKEVICRGSDDDYSFCRALKGETVNTTISFS 40 50 60 70 80 90 130 140 150 160 pF1KE1 FKGIKFSKGKYKCVVEAISGSPEEMLFCLEFVILHQPNSN :::::::::::::::::::::::::::::::::::::::: CCDS56 FKGIKFSKGKYKCVVEAISGSPEEMLFCLEFVILHQPNSN 100 110 120 130 160 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 16:07:00 2016 done: Sun Nov 6 16:07:00 2016 Total Scan time: 1.390 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]