FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE3985, 389 aa 1>>>pF1KE3985 389 - 389 aa - 389 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 6.0007+/-0.000948; mu= 12.1898+/- 0.057 mean_var=66.8486+/-13.382, 0's: 0 Z-trim(104.3): 54 B-trim: 0 in 0/48 Lambda= 0.156866 statistics sampled from 7785 (7839) to 7785 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.614), E-opt: 0.2 (0.241), width: 16 Scan time: 2.790 The best scores are: opt bits E(32554) CCDS6048.1 KCTD9 gene_id:54793|Hs108|chr8 ( 389) 2582 593.6 1e-169 CCDS10475.1 KCTD5 gene_id:54442|Hs108|chr16 ( 234) 322 82.1 5.9e-16 CCDS32728.1 KCTD2 gene_id:23510|Hs108|chr17 ( 263) 321 81.8 7.6e-16 CCDS74855.1 KCTD17 gene_id:79734|Hs108|chr22 ( 220) 288 74.4 1.1e-13 CCDS13940.2 KCTD17 gene_id:79734|Hs108|chr22 ( 297) 288 74.4 1.5e-13 CCDS74854.1 KCTD17 gene_id:79734|Hs108|chr22 ( 321) 288 74.4 1.6e-13 >>CCDS6048.1 KCTD9 gene_id:54793|Hs108|chr8 (389 aa) initn: 2582 init1: 2582 opt: 2582 Z-score: 3160.4 bits: 593.6 E(32554): 1e-169 Smith-Waterman score: 2582; 100.0% identity (100.0% similar) in 389 aa overlap (1-389:1-389) 10 20 30 40 50 60 pF1KE3 MRRVTLFLNGSPKNGKVVAVYGTLSDLLSVASSKLGIKATSVYNGKGGLIDDIALIRDDD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS60 MRRVTLFLNGSPKNGKVVAVYGTLSDLLSVASSKLGIKATSVYNGKGGLIDDIALIRDDD 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 VLFVCEGEPFIDPQTDSKPPEGLLGFHTDWLTLNVGGRYFTTTRSTLVNKEPDSMLAHMF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS60 VLFVCEGEPFIDPQTDSKPPEGLLGFHTDWLTLNVGGRYFTTTRSTLVNKEPDSMLAHMF 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 KDKGVWGNKQDHRGAFLIDRSPEYFEPILNYLRHGQLIVNDGINLLGVLEEARFFGIDSL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS60 KDKGVWGNKQDHRGAFLIDRSPEYFEPILNYLRHGQLIVNDGINLLGVLEEARFFGIDSL 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE3 IEHLEVAIKNSQPPEDHSPISRKEFVRFLLATPTKSELRCQGLNFSGADLSRLDLRYINF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS60 IEHLEVAIKNSQPPEDHSPISRKEFVRFLLATPTKSELRCQGLNFSGADLSRLDLRYINF 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE3 KMANLSRCNLAHANLCCANLERADLSGSVLDCANLQGVKMLCSNAEGASLKLCNFEDPSG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS60 KMANLSRCNLAHANLCCANLERADLSGSVLDCANLQGVKMLCSNAEGASLKLCNFEDPSG 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE3 LKANLEGANLKGVDMEGSQMTGINLRVATLKNAKLKNCNLRGATLAGTDLENCDLSGCDL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS60 LKANLEGANLKGVDMEGSQMTGINLRVATLKNAKLKNCNLRGATLAGTDLENCDLSGCDL 310 320 330 340 350 360 370 380 pF1KE3 QEANLRGSNVKGAIFEEMLTPLHMSQSVR ::::::::::::::::::::::::::::: CCDS60 QEANLRGSNVKGAIFEEMLTPLHMSQSVR 370 380 >>CCDS10475.1 KCTD5 gene_id:54442|Hs108|chr16 (234 aa) initn: 286 init1: 210 opt: 322 Z-score: 400.0 bits: 82.1 E(32554): 5.9e-16 Smith-Waterman score: 322; 42.4% identity (68.0% similar) in 125 aa overlap (85-209:40-161) 60 70 80 90 100 110 pF1KE3 LIRDDDVLFVCEGEPFIDPQTDSKPPEGLLGFHTDWLTLNVGGRYFTTTRSTLVNKEPDS : . :. ::::: :: :::.:: ..: : CCDS10 SPARGGIGAGLGGGLCRRCSAGLGALAQRPGSVSKWVRLNVGGTYFLTTRQTLC-RDPKS 10 20 30 40 50 60 120 130 140 150 160 170 pF1KE3 MLAHMFKDKGVWGNKQDHRGAFLIDRSPEYFEPILNYLRHGQLIVNDGINLLGVLEEARF .: .. . . .:. ::.::::.: :: :.:::::::.:..: . ::::::.: CCDS10 FLYRLCQADPDLDSDKDETGAYLIDRDPTYFGPVLNYLRHGKLVINKDLAEEGVLEEAEF 70 80 90 100 110 120 180 190 200 210 220 230 pF1KE3 FGIDSLIEHLEVAIKNSQPPEDHSPISRKEFVRFLLATPTKSELRCQGLNFSGADLSRLD ..: :::. .. :.. . .. :. :. : : CCDS10 YNITSLIKLVKDKIRERDSKTSQVPV--KHVYRVLQCQEEELTQMVSTMSDGWKFEQLVS 130 140 150 160 170 180 240 250 260 270 280 290 pF1KE3 LRYINFKMANLSRCNLAHANLCCANLERADLSGSVLDCANLQGVKMLCSNAEGASLKLCN CCDS10 IGSSYNYGNEDQAEFLCVVSKELHNTPYGTASEPSEKAKILQERGSRM 190 200 210 220 230 >>CCDS32728.1 KCTD2 gene_id:23510|Hs108|chr17 (263 aa) initn: 262 init1: 262 opt: 321 Z-score: 397.9 bits: 81.8 E(32554): 7.6e-16 Smith-Waterman score: 321; 42.9% identity (70.7% similar) in 133 aa overlap (79-209:61-190) 50 60 70 80 90 100 pF1KE3 LIDDIALIRDDDVLFVCEGEPFIDPQTDSKPPE-GLLGFHTDWLTLNVGGRYFTTTRSTL ::: . : . :. ::::: ::.:::.:: CCDS32 PPSPRPAGPTPRGHGRPAAAVAQPLEPGPGPPERAGGGGAARWVRLNVGGTYFVTTRQTL 40 50 60 70 80 90 110 120 130 140 150 160 pF1KE3 VNKEPDSMLAHMF-KDKGVWGNKQDHRGAFLIDRSPEYFEPILNYLRHGQLIVNDGINLL ..:: :.: .. .. . .:. ::.::::.: :: :::::::::.::.. . CCDS32 -GREPKSFLCRLCCQEDPELDSDKDETGAYLIDRDPTYFGPILNYLRHGKLIITKELAEE 100 110 120 130 140 170 180 190 200 210 220 pF1KE3 GVLEEARFFGIDSLIEHLEVAIKNSQPPEDHSPISRKEFVRFLLATPTKSELRCQGLNFS ::::::.:..: ::.. .. :.... ...:. :. : : CCDS32 GVLEEAEFYNIASLVRLVKERIRDNENRTSQGPV--KHVYRVLQCQEEELTQMVSTMSDG 150 160 170 180 190 200 230 240 250 260 270 280 pF1KE3 GADLSRLDLRYINFKMANLSRCNLAHANLCCANLERADLSGSVLDCANLQGVKMLCSNAE CCDS32 WKFEQLISIGSSYNYGNEDQAEFLCVVSRELNNSTNGIVIEPSEKAKILQERGSRM 210 220 230 240 250 260 >>CCDS74855.1 KCTD17 gene_id:79734|Hs108|chr22 (220 aa) initn: 252 init1: 200 opt: 288 Z-score: 358.9 bits: 74.4 E(32554): 1.1e-13 Smith-Waterman score: 288; 40.2% identity (66.9% similar) in 127 aa overlap (76-198:14-134) 50 60 70 80 90 100 pF1KE3 KGGLIDDIALIRDDDVLFVCEGEPFIDPQTDSKPPEGLLGFHTD----WLTLNVGGRYFT .. :: : : . :. ::::: : CCDS74 MQTPRPAMRMEAGEAAPPAGAGGRAAGGWGKWVRLNVGGTVFL 10 20 30 40 110 120 130 140 150 160 pF1KE3 TTRSTLVNKEPDSMLAHMFKDKGVWGNKQDHRGAFLIDRSPEYFEPILNYLRHGQLIVND :::.:: .: :.:... . . . ... :. ::.::::.: :: ::::.::::.:... CCDS74 TTRQTLC-REQKSFLSRLCQGEELQSDR-DETGAYLIDRDPTYFGPILNFLRHGKLVLDK 50 60 70 80 90 100 170 180 190 200 210 220 pF1KE3 GINLLGVLEEARFFGIDSLIEHLEVAIKNSQPPEDHSPISRKEFVRFLLATPTKSELRCQ . ::::::.:..: ::. ::. . .:.. CCDS74 DMAEEGVLEEAEFYNIGPLIR----IIKDRMEEKDYTVTQVPPKHVYRVLQCQEEELTQM 110 120 130 140 150 230 240 250 260 270 280 pF1KE3 GLNFSGADLSRLDLRYINFKMANLSRCNLAHANLCCANLERADLSGSVLDCANLQGVKML CCDS74 VSTMSDGWRFEQLVNIGSSYNYGSEDQAEFLCVVSKELHSTPNGLSSESSRKTKLLQARG 160 170 180 190 200 210 >>CCDS13940.2 KCTD17 gene_id:79734|Hs108|chr22 (297 aa) initn: 252 init1: 200 opt: 288 Z-score: 356.7 bits: 74.4 E(32554): 1.5e-13 Smith-Waterman score: 288; 40.2% identity (66.9% similar) in 127 aa overlap (76-198:14-134) 50 60 70 80 90 100 pF1KE3 KGGLIDDIALIRDDDVLFVCEGEPFIDPQTDSKPPEGLLGFHTD----WLTLNVGGRYFT .. :: : : . :. ::::: : CCDS13 MQTPRPAMRMEAGEAAPPAGAGGRAAGGWGKWVRLNVGGTVFL 10 20 30 40 110 120 130 140 150 160 pF1KE3 TTRSTLVNKEPDSMLAHMFKDKGVWGNKQDHRGAFLIDRSPEYFEPILNYLRHGQLIVND :::.:: .: :.:... . . . ... :. ::.::::.: :: ::::.::::.:... CCDS13 TTRQTLC-REQKSFLSRLCQGEELQSDR-DETGAYLIDRDPTYFGPILNFLRHGKLVLDK 50 60 70 80 90 100 170 180 190 200 210 220 pF1KE3 GINLLGVLEEARFFGIDSLIEHLEVAIKNSQPPEDHSPISRKEFVRFLLATPTKSELRCQ . ::::::.:..: ::. ::. . .:.. CCDS13 DMAEEGVLEEAEFYNIGPLIR----IIKDRMEEKDYTVTQVPPKHVYRVLQCQEEELTQM 110 120 130 140 150 230 240 250 260 270 280 pF1KE3 GLNFSGADLSRLDLRYINFKMANLSRCNLAHANLCCANLERADLSGSVLDCANLQGVKML CCDS13 VSTMSDGWRFEQLVNIGSSYNYGSEDQAEFLCVVSKELHSTPNGLSSESSRKTKSTEEQL 160 170 180 190 200 210 >>CCDS74854.1 KCTD17 gene_id:79734|Hs108|chr22 (321 aa) initn: 252 init1: 200 opt: 288 Z-score: 356.1 bits: 74.4 E(32554): 1.6e-13 Smith-Waterman score: 288; 40.2% identity (66.9% similar) in 127 aa overlap (76-198:14-134) 50 60 70 80 90 100 pF1KE3 KGGLIDDIALIRDDDVLFVCEGEPFIDPQTDSKPPEGLLGFHTD----WLTLNVGGRYFT .. :: : : . :. ::::: : CCDS74 MQTPRPAMRMEAGEAAPPAGAGGRAAGGWGKWVRLNVGGTVFL 10 20 30 40 110 120 130 140 150 160 pF1KE3 TTRSTLVNKEPDSMLAHMFKDKGVWGNKQDHRGAFLIDRSPEYFEPILNYLRHGQLIVND :::.:: .: :.:... . . . ... :. ::.::::.: :: ::::.::::.:... CCDS74 TTRQTLC-REQKSFLSRLCQGEELQSDR-DETGAYLIDRDPTYFGPILNFLRHGKLVLDK 50 60 70 80 90 100 170 180 190 200 210 220 pF1KE3 GINLLGVLEEARFFGIDSLIEHLEVAIKNSQPPEDHSPISRKEFVRFLLATPTKSELRCQ . ::::::.:..: ::. ::. . .:.. CCDS74 DMAEEGVLEEAEFYNIGPLIR----IIKDRMEEKDYTVTQVPPKHVYRVLQCQEEELTQM 110 120 130 140 150 230 240 250 260 270 280 pF1KE3 GLNFSGADLSRLDLRYINFKMANLSRCNLAHANLCCANLERADLSGSVLDCANLQGVKML CCDS74 VSTMSDGWRFEQLVNIGSSYNYGSEDQAEFLCVVSKELHSTPNGLSSESSRKTKSTEEQL 160 170 180 190 200 210 389 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 08:20:38 2016 done: Sun Nov 6 08:20:38 2016 Total Scan time: 2.790 Total Display time: 0.000 Function used was FASTA [36.3.4 Apr, 2011]