(Linear) (Six-base) MAPSORT of: KIEE3261.seq Check: 6846 from: 1 to: 1878 KIEE3261.orf With 182 enzymes: SgfI * March 22, 2012 16:27 .. AarI CACCTGCnnnn'nnnn_ Cuts at: 0 404 1878 Size: 404 1474 AcuI CTGAAGnnnnnnnnnnnnnn_nn' Cuts at: 0 1318 1878 Size: 1318 560 AfeI AGC'GCT Cuts at: 0 550 1878 Size: 550 1328 AleI CACnn'nnGTG Cuts at: 0 1426 1878 Size: 1426 452 AlwNI CAG_nnn'CTG Cuts at: 0 116 1878 Size: 116 1762 ApaI G_GGCC'C Cuts at: 0 183 239 1864 1878 Size: 183 56 1625 14 Fragments arranged by size: 1625 183 56 14 ApoI r'AATT_y Cuts at: 0 325 1054 1244 1518 1878 Size: 325 729 190 274 360 Fragments arranged by size: 729 360 325 274 190 AvaI C'yCGr_G Cuts at: 0 254 872 1380 1592 1878 Size: 254 618 508 212 286 Fragments arranged by size: 618 508 286 254 212 BanI G'GyrC_C Cuts at: 0 6 1363 1878 Size: 6 1357 515 Fragments arranged by size: 1357 515 6 BanII G_rGCy'C Cuts at: 0 62 183 239 622 758 879 1864 1878 Size: 62 121 56 383 136 121 985 14 Fragments arranged by size: 985 383 136 121 121 62 56 14 BbeI G_GCGC'C Cuts at: 0 10 1878 Size: 10 1868 BbsI GAAGACnn'nnnn_ Cuts at: 0 270 1878 Size: 270 1608 BcgI CGAnnnnnnTGCnnnnnnnnnn_nn' Cuts at: 0 791 825 1878 Size: 791 34 1053 Fragments arranged by size: 1053 791 34 BciVI GTATCCnnnnn_n' Cuts at: 0 757 1878 Size: 757 1121 BlpI GC'TnA_GC Cuts at: 0 1030 1571 1878 Size: 1030 541 307 Fragments arranged by size: 1030 541 307 Bme1580I G_kGCm'C Cuts at: 0 100 136 183 239 495 1864 1873 1878 Size: 100 36 47 56 256 1369 9 5 Fragments arranged by size: 1369 256 100 56 47 36 9 5 BmgBI CAC'GTC Cuts at: 0 168 1614 1878 Size: 168 1446 264 Fragments arranged by size: 1446 264 168 BmrI ACTGGGnnnn_n' Cuts at: 0 451 588 740 1858 1878 Size: 451 137 152 1118 20 Fragments arranged by size: 1118 451 152 137 20 BpmI CTGGAGnnnnnnnnnnnnnn_nn' Cuts at: 0 691 773 1699 1852 1878 Size: 691 82 926 153 26 Fragments arranged by size: 926 691 153 82 26 Bpu10I CC'TnA_GC Cuts at: 0 621 878 956 1878 Size: 621 257 78 922 Fragments arranged by size: 922 621 257 78 BpuEI CTTGAGnnnnnnnnnnnnnn_nn' Cuts at: 0 1768 1878 Size: 1768 110 BsaI GGTCTCn'nnnn_ Cuts at: 0 409 1878 Size: 409 1469 BsaHI Gr'CG_yC Cuts at: 0 7 275 523 1878 Size: 7 268 248 1355 Fragments arranged by size: 1355 268 248 7 BsaWI w'CCGG_w Cuts at: 0 1130 1878 Size: 1130 748 BsaXI ACnnnnnCTCCnnnnnnn_nnn' Cuts at: 0 62 92 1747 1777 1878 Size: 62 30 1655 30 101 Fragments arranged by size: 1655 101 62 30 30 BseRI GAGGAGnnnnnnnn_nn' Cuts at: 0 334 820 1843 1878 Size: 334 486 1023 35 Fragments arranged by size: 1023 486 334 35 BseYI C'CCAG_C Cuts at: 0 129 370 1278 1878 Size: 129 241 908 600 Fragments arranged by size: 908 600 241 129 BsgI GTGCAGnnnnnnnnnnnnnn_nn' Cuts at: 0 1626 1878 Size: 1626 252 BsiHKAI G_wGCw'C Cuts at: 0 62 758 1878 Size: 62 696 1120 Fragments arranged by size: 1120 696 62 BsmBI CGTCTCn'nnnn_ Cuts at: 0 24 156 381 1878 Size: 24 132 225 1497 Fragments arranged by size: 1497 225 132 24 Bsp1286I G_dGCh'C Cuts at: 0 62 100 136 183 239 495 622 758 Size: 62 38 36 47 56 256 127 136 Cuts at: 758 879 1864 1873 1878 Size: 121 985 9 5 Fragments arranged by size: 985 256 136 127 121 62 56 47 38 36 9 5 BspEI T'CCGG_A Cuts at: 0 1130 1878 Size: 1130 748 BspMI ACCTGCnnnn'nnnn_ Cuts at: 0 404 980 1094 1878 Size: 404 576 114 784 Fragments arranged by size: 784 576 404 114 BsrBI CCG'CTC Cuts at: 0 259 1805 1878 Size: 259 1546 73 Fragments arranged by size: 1546 259 73 BsrFI r'CCGG_y Cuts at: 0 307 1878 Size: 307 1571 BsrGI T'GTAC_A Cuts at: 0 641 1878 Size: 641 1237 BstEII G'GTnAC_C Cuts at: 0 1647 1878 Size: 1647 231 BstXI CCAn_nnnn'nTGG Cuts at: 0 694 1677 1878 Size: 694 983 201 Fragments arranged by size: 983 694 201 Bsu36I CC'TnA_GG Cuts at: 0 46 82 420 899 1513 1878 Size: 46 36 338 479 614 365 Fragments arranged by size: 614 479 365 338 46 36 BtgI C'CryG_G Cuts at: 0 239 532 920 1250 1878 Size: 239 293 388 330 628 Fragments arranged by size: 628 388 330 293 239 BtgZI GCGATGnnnnnnnnnn'nnnn_ Cuts at: 0 119 1878 Size: 119 1759 BtsI GCAGTG_nn' Cuts at: 0 659 932 1878 Size: 659 273 946 Fragments arranged by size: 946 659 273 EaeI y'GGCC_r Cuts at: 0 777 888 1433 1637 1800 1878 Size: 777 111 545 204 163 78 Fragments arranged by size: 777 545 204 163 111 78 EarI CTCTTCn'nnn_ Cuts at: 0 1202 1878 Size: 1202 676 EciI GGCGGAnnnnnnnnn_nn' Cuts at: 0 280 1423 1507 1878 Size: 280 1143 84 371 Fragments arranged by size: 1143 371 280 84 EcoICRI GAG'CTC Cuts at: 0 60 756 1878 Size: 60 696 1122 Fragments arranged by size: 1122 696 60 Eco57MI CTGrAGnnnnnnnnnnnnnn_nn' Cuts at: 0 691 773 1318 1699 1852 1878 Size: 691 82 545 381 153 26 Fragments arranged by size: 691 545 381 153 82 26 EcoNI CCTnn'n_nnAGG Cuts at: 0 559 1357 1878 Size: 559 798 521 Fragments arranged by size: 798 559 521 EcoO109I rG'GnC_Cy Cuts at: 0 86 179 180 235 262 701 882 1503 Size: 86 93 1 55 27 439 181 621 Cuts at: 1503 1844 1878 Size: 341 34 Fragments arranged by size: 621 439 341 181 93 86 55 34 27 1 EcoRI G'AATT_C Cuts at: 0 1244 1878 Size: 1244 634 HaeII r_GCGC'y Cuts at: 0 10 314 552 1878 Size: 10 304 238 1326 Fragments arranged by size: 1326 304 238 10 Hin4I GAynnnnnvTCnnnnnnnn_nnnnn' Cuts at: 0 56 62 88 94 1569 1601 1878 Size: 56 6 26 6 1475 32 277 Fragments arranged by size: 1475 277 56 32 26 6 6 HincII GTy'rAC Cuts at: 0 1125 1878 Size: 1125 753 HindIII A'AGCT_T Cuts at: 0 1684 1744 1878 Size: 1684 60 134 Fragments arranged by size: 1684 134 60 KasI G'GCGC_C Cuts at: 0 6 1878 Size: 6 1872 MmeI TCCrACnnnnnnnnnnnnnnnnnn_nn' Cuts at: 0 831 1098 1769 1878 Size: 831 267 671 109 Fragments arranged by size: 831 671 267 109 MscI TGG'CCA Cuts at: 0 890 1639 1878 Size: 890 749 239 Fragments arranged by size: 890 749 239 MslI CAynn'nnrTG Cuts at: 0 919 1426 1540 1645 1783 1878 Size: 919 507 114 105 138 95 Fragments arranged by size: 919 507 138 114 105 95 MspA1I CmG'CkG Cuts at: 0 212 218 241 1398 1458 1878 Size: 212 6 23 1157 60 420 Fragments arranged by size: 1157 420 212 60 23 6 NaeI GCC'GGC Cuts at: 0 309 1878 Size: 309 1569 NarI GG'CG_CC Cuts at: 0 7 1878 Size: 7 1871 NdeI CA'TA_TG Cuts at: 0 965 1878 Size: 965 913 NgoMIV G'CCGG_C Cuts at: 0 307 1878 Size: 307 1571 NruI TCG'CGA Cuts at: 0 104 1878 Size: 104 1774 NspI r_CATG'y Cuts at: 0 514 1293 1878 Size: 514 779 585 Fragments arranged by size: 779 585 514 PflMI CCAn_nnn'nTGG Cuts at: 0 386 1566 1878 Size: 386 1180 312 Fragments arranged by size: 1180 386 312 PfoI T'CCnGG_A Cuts at: 0 668 1829 1878 Size: 668 1161 49 Fragments arranged by size: 1161 668 49 PpuMI rG'GwC_Cy Cuts at: 0 262 882 1878 Size: 262 620 996 Fragments arranged by size: 996 620 262 PspOMI G'GGCC_C Cuts at: 0 179 235 1860 1878 Size: 179 56 1625 18 Fragments arranged by size: 1625 179 56 18 PspXI vC'TCGA_Gb Cuts at: 0 1380 1878 Size: 1380 498 PstI C_TGCA'G Cuts at: 0 217 1403 1502 1878 Size: 217 1186 99 376 Fragments arranged by size: 1186 376 217 99 PvuII CAG'CTG Cuts at: 0 1398 1878 Size: 1398 480 SacI G_AGCT'C Cuts at: 0 62 758 1878 Size: 62 696 1120 Fragments arranged by size: 1120 696 62 SacII CC_GC'GG Cuts at: 0 242 1878 Size: 242 1636 SexAI A'CCwGG_T Cuts at: 0 845 1878 Size: 845 1033 SfcI C'TryA_G Cuts at: 0 213 1399 1498 1878 Size: 213 1186 99 380 Fragments arranged by size: 1186 380 213 99 SfoI GGC'GCC Cuts at: 0 8 1878 Size: 8 1870 SgrAI Cr'CCGG_yG Cuts at: 0 307 1878 Size: 307 1571 SmaI CCC'GGG Cuts at: 0 1594 1878 Size: 1594 284 SmlI C'TyrA_G Cuts at: 0 1380 1747 1878 Size: 1380 367 131 Fragments arranged by size: 1380 367 131 SrfI GCCC'GGGC Cuts at: 0 1594 1878 Size: 1594 284 StyI C'CwwG_G Cuts at: 0 143 768 1878 Size: 143 625 1110 Fragments arranged by size: 1110 625 143 TaqII GACCGAnnnnnnnnn_nn' Cuts at: 0 160 1878 Size: 160 1718 TatI w'GTAC_w Cuts at: 0 641 1878 Size: 641 1237 TstI CACnnnnnnTCCnnnnnnn_nnnnn' Cuts at: 0 1235 1267 1878 Size: 1235 32 611 Fragments arranged by size: 1235 611 32 Tth111I GACn'n_nGTC Cuts at: 0 682 1878 Size: 682 1196 XbaI T'CTAG_A Cuts at: 0 816 1107 1878 Size: 816 291 771 Fragments arranged by size: 816 771 291 XcmI CCAnnnn_n'nnnnTGG Cuts at: 0 1022 1188 1785 1878 Size: 1022 166 597 93 Fragments arranged by size: 1022 597 166 93 XhoI C'TCGA_G Cuts at: 0 1380 1878 Size: 1380 498 XmaI C'CCGG_G Cuts at: 0 1592 1878 Size: 1592 286 XmnI GAAnn'nnTTC Cuts at: 0 328 1878 Size: 328 1550 Enzymes that do cut: AarI AcuI AfeI AleI AlwNI ApaI ApoI AvaI BanI BanII BbeI BbsI BcgI BciVI BlpI Bme1580I BmgBI BmrI BpmI Bpu10I BpuEI BsaI BsaHI BsaWI BsaXI BseRI BseYI BsgI BsiHKAI BsmBI Bsp1286I BspEI BspMI BsrBI BsrFI BsrGI BstEII BstXI Bsu36I BtgI BtgZI BtsI EaeI EarI EciI EcoICRI Eco57MI EcoNI EcoO109I EcoRI HaeII Hin4I HincII HindIII KasI MmeI MscI MslI MspA1I NaeI NarI NdeI NgoMIV NruI NspI PflMI PfoI PpuMI PspOMI PspXI PstI PvuII SacI SacII SexAI SfcI SfoI SgrAI SmaI SmlI SrfI StyI TaqII TatI TstI Tth111I XbaI XcmI XhoI XmaI XmnI Enzymes that do not cut: AatII AccI Acc65I AclI AflII AflIII AgeI AhdI AlfI AloI ApaLI AscI AseI AsiSI AvrII BaeI BamHI BbvCI BclI BfrBI BglI BglII BmtI BplI BsaAI BsaBI BsiEI BsiWI BsmI BspHI BsrDI BssHII BssSI BstAPI BstBI BstYI BstZ17I ClaI CspCI DraI DraIII DrdI EagI EcoRV FalI FseI FspI FspAI HpaI KpnI MfeI MluI NcoI NheI NotI NsiI PacI PasI PciI PmeI PmlI PpiI PshAI PsiI PsrI PvuI RsrII SalI SanDI SapI SbfI ScaI SfiI SgfI SnaBI SpeI SphI SspI StuI SwaI ZraI