FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE6179, 119 aa 1>>>pF1KE6179 119 - 119 aa - 119 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 4.8358+/-0.000756; mu= 12.3151+/- 0.046 mean_var=49.3801+/- 9.552, 0's: 0 Z-trim(106.3): 7 B-trim: 8 in 2/49 Lambda= 0.182515 statistics sampled from 8908 (8910) to 8908 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.678), E-opt: 0.2 (0.274), width: 16 Scan time: 1.310 The best scores are: opt bits E(32554) CCDS5807.1 ATP6V1F gene_id:9296|Hs108|chr7 ( 119) 771 210.2 2.5e-55 CCDS56511.1 ATP6V1F gene_id:9296|Hs108|chr7 ( 147) 441 123.3 4.3e-29 >>CCDS5807.1 ATP6V1F gene_id:9296|Hs108|chr7 (119 aa) initn: 771 init1: 771 opt: 771 Z-score: 1106.9 bits: 210.2 E(32554): 2.5e-55 Smith-Waterman score: 771; 100.0% identity (100.0% similar) in 119 aa overlap (1-119:1-119) 10 20 30 40 50 60 pF1KE6 MAGRGKLIAVIGDEDTVTGFLLGGIGELNKNRHPNFLVVEKDTTINEIEDTFRQFLNRDD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS58 MAGRGKLIAVIGDEDTVTGFLLGGIGELNKNRHPNFLVVEKDTTINEIEDTFRQFLNRDD 10 20 30 40 50 60 70 80 90 100 110 pF1KE6 IGIILINQYIAEMVRHALDAHQQSIPAVLEIPSKEHPYDAAKDSILRRARGMFTAEDLR ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS58 IGIILINQYIAEMVRHALDAHQQSIPAVLEIPSKEHPYDAAKDSILRRARGMFTAEDLR 70 80 90 100 110 >>CCDS56511.1 ATP6V1F gene_id:9296|Hs108|chr7 (147 aa) initn: 437 init1: 437 opt: 441 Z-score: 635.8 bits: 123.3 E(32554): 4.3e-29 Smith-Waterman score: 705; 81.0% identity (81.0% similar) in 147 aa overlap (1-119:1-147) 10 20 30 40 50 pF1KE6 MAGRGKLIAVIGDEDTVTGFLLGGIGELNKNRHPNFLVVEKDTTINEIEDTFR------- ::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS56 MAGRGKLIAVIGDEDTVTGFLLGGIGELNKNRHPNFLVVEKDTTINEIEDTFRSLGSLPG 10 20 30 40 50 60 60 70 80 90 pF1KE6 ---------------------QFLNRDDIGIILINQYIAEMVRHALDAHQQSIPAVLEIP ::::::::::::::::::::::::::::::::::::::: CCDS56 SVVEANPNQRDPPLWDEIDSRQFLNRDDIGIILINQYIAEMVRHALDAHQQSIPAVLEIP 70 80 90 100 110 120 100 110 pF1KE6 SKEHPYDAAKDSILRRARGMFTAEDLR ::::::::::::::::::::::::::: CCDS56 SKEHPYDAAKDSILRRARGMFTAEDLR 130 140 119 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 10:07:46 2016 done: Tue Nov 8 10:07:46 2016 Total Scan time: 1.310 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]