FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE4341, 354 aa 1>>>pF1KE4341 354 - 354 aa - 354 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.4072+/-0.00092; mu= 15.7821+/- 0.055 mean_var=69.1166+/-13.837, 0's: 0 Z-trim(105.1): 12 B-trim: 0 in 0/51 Lambda= 0.154271 statistics sampled from 8233 (8239) to 8233 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.629), E-opt: 0.2 (0.253), width: 16 Scan time: 2.300 The best scores are: opt bits E(32554) CCDS5639.1 PON3 gene_id:5446|Hs108|chr7 ( 354) 2326 526.9 1e-149 CCDS5640.1 PON2 gene_id:5445|Hs108|chr7 ( 354) 1606 366.6 1.8e-101 CCDS5638.1 PON1 gene_id:5444|Hs108|chr7 ( 355) 1495 341.9 4.9e-94 CCDS47644.1 PON2 gene_id:5445|Hs108|chr7 ( 342) 1015 235.1 6.8e-62 >>CCDS5639.1 PON3 gene_id:5446|Hs108|chr7 (354 aa) initn: 2326 init1: 2326 opt: 2326 Z-score: 2801.4 bits: 526.9 E(32554): 1e-149 Smith-Waterman score: 2326; 99.7% identity (100.0% similar) in 354 aa overlap (1-354:1-354) 10 20 30 40 50 60 pF1KE4 MGKLVALVLLGVGLSLVGEMFLAFRERVNASREVEPVEPENCHLIEELENGSEDIDILPS :::::::::::::::::::::::::::::::::::::::::::::::::.:::::::::: CCDS56 MGKLVALVLLGVGLSLVGEMFLAFRERVNASREVEPVEPENCHLIEELESGSEDIDILPS 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE4 GLAFISSGLKYPGMPNFAPDEPGKIFLMDLNEQNPRAQALEISGGFDKELFNPHGISIFI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS56 GLAFISSGLKYPGMPNFAPDEPGKIFLMDLNEQNPRAQALEISGGFDKELFNPHGISIFI 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE4 DKDNTVYLYVVNHPHMKSTVEIFKFEEQQRSLVYLKTIKHELLKSVNDIVVLGPEQFYAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS56 DKDNTVYLYVVNHPHMKSTVEIFKFEEQQRSLVYLKTIKHELLKSVNDIVVLGPEQFYAT 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE4 RDHYFTNSLLSFFEMILDLRWTYVLFYSPREVKVVAKGFCSANGITVSADQKYVYVADVA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS56 RDHYFTNSLLSFFEMILDLRWTYVLFYSPREVKVVAKGFCSANGITVSADQKYVYVADVA 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE4 AKNIHIMEKHDNWDLTQLKVIQLGTLVDNLTVDPATGDILAGCHPNPMKLLNYNPEDPPG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS56 AKNIHIMEKHDNWDLTQLKVIQLGTLVDNLTVDPATGDILAGCHPNPMKLLNYNPEDPPG 250 260 270 280 290 300 310 320 330 340 350 pF1KE4 SEVLRIQNVLSEKPRVSTVYANNGSVLQGTSVASVYHGKILIGTVFHKTLYCEL :::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS56 SEVLRIQNVLSEKPRVSTVYANNGSVLQGTSVASVYHGKILIGTVFHKTLYCEL 310 320 330 340 350 >>CCDS5640.1 PON2 gene_id:5445|Hs108|chr7 (354 aa) initn: 1606 init1: 1606 opt: 1606 Z-score: 1935.3 bits: 366.6 E(32554): 1.8e-101 Smith-Waterman score: 1606; 65.5% identity (89.5% similar) in 354 aa overlap (1-354:1-354) 10 20 30 40 50 60 pF1KE4 MGKLVALVLLGVGLSLVGEMFLAFRERVNASREVEPVEPENCHLIEELENGSEDIDILPS ::.:::. :::..:.:.:: .::.:.:..:::::: :. .::::. .: :::::::::. CCDS56 MGRLVAVGLLGIALALLGERLLALRNRLKASREVESVDLPHCHLIKGIEAGSEDIDILPN 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE4 GLAFISSGLKYPGMPNFAPDEPGKIFLMDLNEQNPRAQALEISGGFDKELFNPHGISIFI ::::.: :::.::. .::::.:: :..:::.:..:::. :.:: ::: ::::::: :: CCDS56 GLAFFSVGLKFPGLHSFAPDKPGGILMMDLKEEKPRARELRISRGFDLASFNPHGISTFI 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE4 DKDNTVYLYVVNHPHMKSTVEIFKFEEQQRSLVYLKTIKHELLKSVNDIVVLGPEQFYAT :.:.::::.:::::..:.::::::::: . ::..:::.::::: :::::...:: .:::: CCDS56 DNDDTVYLFVVNHPEFKNTVEIFKFEEAENSLLHLKTVKHELLPSVNDITAVGPAHFYAT 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE4 RDHYFTNSLLSFFEMILDLRWTYVLFYSPREVKVVAKGFCSANGITVSADQKYVYVADVA ::::.. .:...: :.:.:. :..::: ::::::.:: :::::..: :.::.::::. CCDS56 NDHYFSDPFLKYLETYLNLHWANVVYYSPNEVKVVAEGFDSANGINISPDDKYIYVADIL 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE4 AKNIHIMEKHDNWDLTQLKVIQLGTLVDNLTVDPATGDILAGCHPNPMKLLNYNPEDPPG :..::..::: : .::::::..: ::::::..::..::: .::::: .::. :.:..::. CCDS56 AHEIHVLEKHTNMNLTQLKVLELDTLVDNLSIDPSSGDIWVGCHPNGQKLFVYDPNNPPS 250 260 270 280 290 300 310 320 330 340 350 pF1KE4 SEVLRIQNVLSEKPRVSTVYANNGSVLQGTSVASVYHGKILIGTVFHKTLYCEL ::::::::.::::: :.::::::::::::.:::::: ::.::::..:..::::: CCDS56 SEVLRIQNILSEKPTVTTVYANNGSVLQGSSVASVYDGKLLIGTLYHRALYCEL 310 320 330 340 350 >>CCDS5638.1 PON1 gene_id:5444|Hs108|chr7 (355 aa) initn: 1486 init1: 1102 opt: 1495 Z-score: 1801.8 bits: 341.9 E(32554): 4.9e-94 Smith-Waterman score: 1495; 60.8% identity (85.6% similar) in 355 aa overlap (1-354:1-355) 10 20 30 40 50 60 pF1KE4 MGKLVALVLLGVGLSLVGEMFLAFRERVNASREVEPVEPENCHLIEELENGSEDIDILPS :.::.::.:::.::.: . ... :.:: :::.::: ::.:.. .:.::::..:::. CCDS56 MAKLIALTLLGMGLALFRNHQSSYQTRLNALREVQPVELPNCNLVKGIETGSEDLEILPN 10 20 30 40 50 60 70 80 90 100 110 pF1KE4 GLAFISSGLKYPGMPNFAPDEPGKIFLMDLNEQNPRAQALEISGG-FDKELFNPHGISIF :::::::::::::. .: :. ::::.::::::..: . : :.:. :: ::::::: : CCDS56 GLAFISSGLKYPGIKSFNPNSPGKILLMDLNEEDPTVLELGITGSKFDVSSFNPHGISTF 70 80 90 100 110 120 120 130 140 150 160 170 pF1KE4 IDKDNTVYLYVVNHPHMKSTVEIFKFEEQQRSLVYLKTIKHELLKSVNDIVVLGPEQFYA :.::..:: ::::: :::::.:::.:...::..::::.:.:: ..::::..:::.::. CCDS56 TDEDNAMYLLVVNHPDAKSTVELFKFQEEEKSLLHLKTIRHKLLPNLNDIVAVGPEHFYG 130 140 150 160 170 180 180 190 200 210 220 230 pF1KE4 TRDHYFTNSLLSFFEMILDLRWTYVLFYSPREVKVVAKGFCSANGITVSADQKYVYVADV : :::: . :. .:: : : :.::..::: ::.:::.:: ::::..: : ::::.:.. CCDS56 TNDHYFLDPYLQSWEMYLGLAWSYVVYYSPSEVRVVAEGFDFANGINISPDGKYVYIAEL 190 200 210 220 230 240 240 250 260 270 280 290 pF1KE4 AAKNIHIMEKHDNWDLTQLKVIQLGTLVDNLTVDPATGDILAGCHPNPMKLLNYNPEDPP :..::..::: :: :: :: ....:::::..::: :::. .::::: ::.. :. :.:: CCDS56 LAHKIHVYEKHANWTLTPLKSLDFNTLVDNISVDPETGDLWVGCHPNGMKIFFYDSENPP 250 260 270 280 290 300 300 310 320 330 340 350 pF1KE4 GSEVLRIQNVLSEKPRVSTVYANNGSVLQGTSVASVYHGKILIGTVFHKTLYCEL .::::::::.:.:.:.:. :::.::.::::..:::::.::.::::::::.::::: CCDS56 ASEVLRIQNILTEEPKVTQVYAENGTVLQGSTVASVYKGKLLIGTVFHKALYCEL 310 320 330 340 350 >>CCDS47644.1 PON2 gene_id:5445|Hs108|chr7 (342 aa) initn: 1541 init1: 1013 opt: 1015 Z-score: 1224.7 bits: 235.1 E(32554): 6.8e-62 Smith-Waterman score: 1500; 62.7% identity (86.2% similar) in 354 aa overlap (1-354:1-342) 10 20 30 40 50 60 pF1KE4 MGKLVALVLLGVGLSLVGEMFLAFRERVNASREVEPVEPENCHLIEELENGSEDIDILPS ::.:::. :::..:.:.:: .::.:.:..:::::: :. .::::. .: :::::::::. CCDS47 MGRLVAVGLLGIALALLGERLLALRNRLKASREVESVDLPHCHLIKGIEAGSEDIDILPN 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE4 GLAFISSGLKYPGMPNFAPDEPGKIFLMDLNEQNPRAQALEISGGFDKELFNPHGISIFI ::::.: :::.::. .::::.:: :..:::.:..:::. :.:: ::: ::::::: :: CCDS47 GLAFFSVGLKFPGLHSFAPDKPGGILMMDLKEEKPRARELRISRGFDLASFNPHGISTFI 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE4 DKDNTVYLYVVNHPHMKSTVEIFKFEEQQRSLVYLKTIKHELLKSVNDIVVLGPEQFYAT :.. .:.::::::::: . ::..:::.::::: :::::...:: .:::: CCDS47 DNE------------FKNTVEIFKFEEAENSLLHLKTVKHELLPSVNDITAVGPAHFYAT 130 140 150 160 190 200 210 220 230 240 pF1KE4 RDHYFTNSLLSFFEMILDLRWTYVLFYSPREVKVVAKGFCSANGITVSADQKYVYVADVA ::::.. .:...: :.:.:. :..::: ::::::.:: :::::..: :.::.::::. CCDS47 NDHYFSDPFLKYLETYLNLHWANVVYYSPNEVKVVAEGFDSANGINISPDDKYIYVADIL 170 180 190 200 210 220 250 260 270 280 290 300 pF1KE4 AKNIHIMEKHDNWDLTQLKVIQLGTLVDNLTVDPATGDILAGCHPNPMKLLNYNPEDPPG :..::..::: : .::::::..: ::::::..::..::: .::::: .::. :.:..::. CCDS47 AHEIHVLEKHTNMNLTQLKVLELDTLVDNLSIDPSSGDIWVGCHPNGQKLFVYDPNNPPS 230 240 250 260 270 280 310 320 330 340 350 pF1KE4 SEVLRIQNVLSEKPRVSTVYANNGSVLQGTSVASVYHGKILIGTVFHKTLYCEL ::::::::.::::: :.::::::::::::.:::::: ::.::::..:..::::: CCDS47 SEVLRIQNILSEKPTVTTVYANNGSVLQGSSVASVYDGKLLIGTLYHRALYCEL 290 300 310 320 330 340 354 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 17:37:33 2016 done: Mon Nov 7 17:37:33 2016 Total Scan time: 2.300 Total Display time: 0.000 Function used was FASTA [36.3.4 Apr, 2011]