FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE2073, 736 aa 1>>>pF1KE2073 736 - 736 aa - 736 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 7.4475+/-0.00151; mu= 8.5809+/- 0.089 mean_var=136.6688+/-28.389, 0's: 0 Z-trim(102.0): 147 B-trim: 43 in 2/48 Lambda= 0.109708 statistics sampled from 6579 (6744) to 6579 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.556), E-opt: 0.2 (0.207), width: 16 Scan time: 2.150 The best scores are: opt bits E(32554) CCDS5624.1 KRIT1 gene_id:889|Hs108|chr7 ( 736) 4916 791.1 0 CCDS34679.1 KRIT1 gene_id:889|Hs108|chr7 ( 688) 2710 441.9 1.5e-123 >>CCDS5624.1 KRIT1 gene_id:889|Hs108|chr7 (736 aa) initn: 4916 init1: 4916 opt: 4916 Z-score: 4218.0 bits: 791.1 E(32554): 0 Smith-Waterman score: 4916; 100.0% identity (100.0% similar) in 736 aa overlap (1-736:1-736) 10 20 30 40 50 60 pF1KE2 MGNPENIEDAYVAVIRPKNTASLNSREYRAKSYEILLHEVPIEGQKKKRKKVLLETKLQG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS56 MGNPENIEDAYVAVIRPKNTASLNSREYRAKSYEILLHEVPIEGQKKKRKKVLLETKLQG 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 NSEITQGILDYVVETTKPISPANQGIRGKRVVLMKKFPLDGEKMGREASLFIVPSVVKDN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS56 NSEITQGILDYVVETTKPISPANQGIRGKRVVLMKKFPLDGEKMGREASLFIVPSVVKDN 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE2 TKYTYTPGCPIFYCLQDIMRVCSESSTHFATLTARMLIALDKWLDERHAQSHFIPALFRP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS56 TKYTYTPGCPIFYCLQDIMRVCSESSTHFATLTARMLIALDKWLDERHAQSHFIPALFRP 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE2 SPLERIKTNVINPAYATESGQTENSLHMGYSALEIKSKMLALEKADTCIYNPLFGSDLQY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS56 SPLERIKTNVINPAYATESGQTENSLHMGYSALEIKSKMLALEKADTCIYNPLFGSDLQY 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE2 TNRVDKVVINPYFGLGAPDYSKIQIPKQEKWQRSMSSVTEDKERQWVDDFPLHRSACEGD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS56 TNRVDKVVINPYFGLGAPDYSKIQIPKQEKWQRSMSSVTEDKERQWVDDFPLHRSACEGD 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE2 SELLSRLLSERFSVNQLDSDHWAPIHYACWYGKVEATRILLEKGKCNPNLLNGQLSSPLH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS56 SELLSRLLSERFSVNQLDSDHWAPIHYACWYGKVEATRILLEKGKCNPNLLNGQLSSPLH 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE2 FAAGGGHAEIVQILLNHPETDRHITDQQGRSPLNICEENKQNNWEEAAKLLKEAINKPYE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS56 FAAGGGHAEIVQILLNHPETDRHITDQQGRSPLNICEENKQNNWEEAAKLLKEAINKPYE 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE2 KVRIYRMDGSYRSVELKHGNNTTVQQIMEGMRLSQETQQYFTIWICSENLSLQLKPYHKP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS56 KVRIYRMDGSYRSVELKHGNNTTVQQIMEGMRLSQETQQYFTIWICSENLSLQLKPYHKP 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE2 LQHVRDWPEILAELTNLDPQRETPQLFLRRDVRLPLEVEKQIEDPLAILILFDEARYNLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS56 LQHVRDWPEILAELTNLDPQRETPQLFLRRDVRLPLEVEKQIEDPLAILILFDEARYNLL 490 500 510 520 530 540 550 560 570 580 590 600 pF1KE2 KGFYTAPDAKLITLASLLLQIVYGNYESKKHKQGFLNEENLKSIVPVTKLKSKAPHWTNR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS56 KGFYTAPDAKLITLASLLLQIVYGNYESKKHKQGFLNEENLKSIVPVTKLKSKAPHWTNR 550 560 570 580 590 600 610 620 630 640 650 660 pF1KE2 ILHEYKNLSTSEGVSKEMHHLQRMFLQNCWEIPTYGAAFFTGQIFTKASPSNHKVIPVYV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS56 ILHEYKNLSTSEGVSKEMHHLQRMFLQNCWEIPTYGAAFFTGQIFTKASPSNHKVIPVYV 610 620 630 640 650 660 670 680 690 700 710 720 pF1KE2 GVNIKGLHLLNMETKALLISLKYGCFMWQLGDTDTCFQIHSMENKMSFIVHTKQAGLVVK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS56 GVNIKGLHLLNMETKALLISLKYGCFMWQLGDTDTCFQIHSMENKMSFIVHTKQAGLVVK 670 680 690 700 710 720 730 pF1KE2 LLMKLNGQLMPTERNS :::::::::::::::: CCDS56 LLMKLNGQLMPTERNS 730 >>CCDS34679.1 KRIT1 gene_id:889|Hs108|chr7 (688 aa) initn: 4546 init1: 2710 opt: 2710 Z-score: 2331.4 bits: 441.9 E(32554): 1.5e-123 Smith-Waterman score: 4454; 93.5% identity (93.5% similar) in 736 aa overlap (1-736:1-688) 10 20 30 40 50 60 pF1KE2 MGNPENIEDAYVAVIRPKNTASLNSREYRAKSYEILLHEVPIEGQKKKRKKVLLETKLQG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 MGNPENIEDAYVAVIRPKNTASLNSREYRAKSYEILLHEVPIEGQKKKRKKVLLETKLQG 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 NSEITQGILDYVVETTKPISPANQGIRGKRVVLMKKFPLDGEKMGREASLFIVPSVVKDN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 NSEITQGILDYVVETTKPISPANQGIRGKRVVLMKKFPLDGEKMGREASLFIVPSVVKDN 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE2 TKYTYTPGCPIFYCLQDIMRVCSESSTHFATLTARMLIALDKWLDERHAQSHFIPALFRP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 TKYTYTPGCPIFYCLQDIMRVCSESSTHFATLTARMLIALDKWLDERHAQSHFIPALFRP 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE2 SPLERIKTNVINPAYATESGQTENSLHMGYSALEIKSKMLALEKADTCIYNPLFGSDLQY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 SPLERIKTNVINPAYATESGQTENSLHMGYSALEIKSKMLALEKADTCIYNPLFGSDLQY 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE2 TNRVDKVVINPYFGLGAPDYSKIQIPKQEKWQRSMSSVTEDKERQWVDDFPLHRSACEGD :::::::::::::::::::::::::::::::::::::::::: CCDS34 TNRVDKVVINPYFGLGAPDYSKIQIPKQEKWQRSMSSVTEDK------------------ 250 260 270 280 310 320 330 340 350 360 pF1KE2 SELLSRLLSERFSVNQLDSDHWAPIHYACWYGKVEATRILLEKGKCNPNLLNGQLSSPLH :::::::::::::::::::::::::::::: CCDS34 ------------------------------YGKVEATRILLEKGKCNPNLLNGQLSSPLH 290 300 310 370 380 390 400 410 420 pF1KE2 FAAGGGHAEIVQILLNHPETDRHITDQQGRSPLNICEENKQNNWEEAAKLLKEAINKPYE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 FAAGGGHAEIVQILLNHPETDRHITDQQGRSPLNICEENKQNNWEEAAKLLKEAINKPYE 320 330 340 350 360 370 430 440 450 460 470 480 pF1KE2 KVRIYRMDGSYRSVELKHGNNTTVQQIMEGMRLSQETQQYFTIWICSENLSLQLKPYHKP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 KVRIYRMDGSYRSVELKHGNNTTVQQIMEGMRLSQETQQYFTIWICSENLSLQLKPYHKP 380 390 400 410 420 430 490 500 510 520 530 540 pF1KE2 LQHVRDWPEILAELTNLDPQRETPQLFLRRDVRLPLEVEKQIEDPLAILILFDEARYNLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 LQHVRDWPEILAELTNLDPQRETPQLFLRRDVRLPLEVEKQIEDPLAILILFDEARYNLL 440 450 460 470 480 490 550 560 570 580 590 600 pF1KE2 KGFYTAPDAKLITLASLLLQIVYGNYESKKHKQGFLNEENLKSIVPVTKLKSKAPHWTNR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 KGFYTAPDAKLITLASLLLQIVYGNYESKKHKQGFLNEENLKSIVPVTKLKSKAPHWTNR 500 510 520 530 540 550 610 620 630 640 650 660 pF1KE2 ILHEYKNLSTSEGVSKEMHHLQRMFLQNCWEIPTYGAAFFTGQIFTKASPSNHKVIPVYV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 ILHEYKNLSTSEGVSKEMHHLQRMFLQNCWEIPTYGAAFFTGQIFTKASPSNHKVIPVYV 560 570 580 590 600 610 670 680 690 700 710 720 pF1KE2 GVNIKGLHLLNMETKALLISLKYGCFMWQLGDTDTCFQIHSMENKMSFIVHTKQAGLVVK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 GVNIKGLHLLNMETKALLISLKYGCFMWQLGDTDTCFQIHSMENKMSFIVHTKQAGLVVK 620 630 640 650 660 670 730 pF1KE2 LLMKLNGQLMPTERNS :::::::::::::::: CCDS34 LLMKLNGQLMPTERNS 680 736 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 16:22:27 2016 done: Sun Nov 6 16:22:27 2016 Total Scan time: 2.150 Total Display time: 0.030 Function used was FASTA [36.3.4 Apr, 2011]