FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE1586, 94 aa 1>>>pF1KE1586 94 - 94 aa - 94 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 4.5848+/-0.000593; mu= 12.3156+/- 0.036 mean_var=53.4823+/-10.420, 0's: 0 Z-trim(111.0): 48 B-trim: 67 in 1/50 Lambda= 0.175376 statistics sampled from 12007 (12061) to 12007 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.76), E-opt: 0.2 (0.37), width: 16 Scan time: 1.470 The best scores are: opt bits E(32554) CCDS5578.1 CCL26 gene_id:10344|Hs108|chr7 ( 94) 635 167.7 9.8e-43 CCDS32626.1 CCL3L3 gene_id:414062|Hs108|chr17 ( 93) 241 68.0 9.9e-13 CCDS11307.1 CCL3 gene_id:6348|Hs108|chr17 ( 92) 237 66.9 2e-12 CCDS11300.1 CCL5 gene_id:6352|Hs108|chr17 ( 91) 231 65.4 5.6e-12 CCDS11308.1 CCL4 gene_id:6351|Hs108|chr17 ( 92) 231 65.4 5.7e-12 CCDS32624.1 CCL14 gene_id:6358|Hs108|chr17 ( 93) 219 62.4 4.7e-11 CCDS11281.1 CCL13 gene_id:6357|Hs108|chr17 ( 98) 216 61.7 8.3e-11 >>CCDS5578.1 CCL26 gene_id:10344|Hs108|chr7 (94 aa) initn: 635 init1: 635 opt: 635 Z-score: 880.7 bits: 167.7 E(32554): 9.8e-43 Smith-Waterman score: 635; 100.0% identity (100.0% similar) in 94 aa overlap (1-94:1-94) 10 20 30 40 50 60 pF1KE1 MMGLSLASAVLLASLLSLHLGTATRGSDISKTCCFQYSHKPLPWTWVRSYEFTSNSCSQR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 MMGLSLASAVLLASLLSLHLGTATRGSDISKTCCFQYSHKPLPWTWVRSYEFTSNSCSQR 10 20 30 40 50 60 70 80 90 pF1KE1 AVIFTTKRGKKVCTHPRKKWVQKYISLLKTPKQL :::::::::::::::::::::::::::::::::: CCDS55 AVIFTTKRGKKVCTHPRKKWVQKYISLLKTPKQL 70 80 90 >>CCDS32626.1 CCL3L3 gene_id:414062|Hs108|chr17 (93 aa) initn: 243 init1: 218 opt: 241 Z-score: 342.0 bits: 68.0 E(32554): 9.9e-13 Smith-Waterman score: 241; 41.1% identity (73.3% similar) in 90 aa overlap (2-89:1-90) 10 20 30 40 50 pF1KE1 MMGLSLAS-AVLLASL-LSLHLGTATRGSDISKTCCFQYSHKPLPWTWVRSYEFTSNSCS : .: :. :::: .. : .. .: ..: .:::.:. . .: ... .: ::..:: CCDS32 MQVSTAALAVLLCTMALCNQVLSAPLAADTPTACCFSYTSRQIPQNFIADYFETSSQCS 10 20 30 40 50 60 70 80 90 pF1KE1 QRAVIFTTKRGKKVCTHPRKKWVQKYISLLKTPKQL . .::: ::::..::. : ..:::::.: :. CCDS32 KPSVIFLTKRGRQVCADPSEEWVQKYVSDLELSA 60 70 80 90 >>CCDS11307.1 CCL3 gene_id:6348|Hs108|chr17 (92 aa) initn: 255 init1: 233 opt: 237 Z-score: 336.6 bits: 66.9 E(32554): 2e-12 Smith-Waterman score: 237; 39.3% identity (73.0% similar) in 89 aa overlap (2-89:1-89) 10 20 30 40 50 pF1KE1 MMGLSLAS-AVLLASLLSLHLGTATRGSDISKTCCFQYSHKPLPWTWVRSYEFTSNSCSQ : .: :. :::: .. . .:. ..: .:::.:. . .: ... .: ::..::. CCDS11 MQVSTAALAVLLCTMALCNQFSASLAADTPTACCFSYTSRQIPQNFIADYFETSSQCSK 10 20 30 40 50 60 70 80 90 pF1KE1 RAVIFTTKRGKKVCTHPRKKWVQKYISLLKTPKQL .::: :::...::. : ..:::::.: :. CCDS11 PGVIFLTKRSRQVCADPSEEWVQKYVSDLELSA 60 70 80 90 >>CCDS11300.1 CCL5 gene_id:6352|Hs108|chr17 (91 aa) initn: 245 init1: 216 opt: 231 Z-score: 328.5 bits: 65.4 E(32554): 5.6e-12 Smith-Waterman score: 231; 37.8% identity (76.8% similar) in 82 aa overlap (8-89:9-89) 10 20 30 40 50 pF1KE1 MMGLSLASAVLLASLLSLHLGTATRGSDISKTCCFQYSHKPLPWTWVRSYEFTSNSCSQ ...:.:. : ... .:: . ::: : .::: . .. : .::..::. CCDS11 MKVSAAALAVILIATALCAPASASPYSSD-TTPCCFAYIARPLPRAHIKEYFYTSGKCSN 10 20 30 40 50 60 70 80 90 pF1KE1 RAVIFTTKRGKKVCTHPRKKWVQKYISLLKTPKQL ::.:.:.....::..:.::::..::. :. CCDS11 PAVVFVTRKNRQVCANPEKKWVREYINSLEMS 60 70 80 90 >>CCDS11308.1 CCL4 gene_id:6351|Hs108|chr17 (92 aa) initn: 222 init1: 222 opt: 231 Z-score: 328.4 bits: 65.4 E(32554): 5.7e-12 Smith-Waterman score: 231; 45.0% identity (72.5% similar) in 80 aa overlap (6-85:8-86) 10 20 30 40 50 pF1KE1 MMGLSLASAVLLASLLSLHLGTATRGSDISKTCCFQYSHKPLPWTWVRSYEFTSNSCS :. .:.:.. : : .: ::: .:::.:. . :: ..: .: ::. :: CCDS11 MKLCVTVLSLLMLVAAFCSPAL-SAPMGSDPPTACCFSYTARKLPRNFVVDYYETSSLCS 10 20 30 40 50 60 70 80 90 pF1KE1 QRAVIFTTKRGKKVCTHPRKKWVQKYISLLKTPKQL : ::.: :::.:.::. : ..:::.:. CCDS11 QPAVVFQTKRSKQVCADPSESWVQEYVYDLELN 60 70 80 90 >>CCDS32624.1 CCL14 gene_id:6358|Hs108|chr17 (93 aa) initn: 228 init1: 200 opt: 219 Z-score: 311.9 bits: 62.4 E(32554): 4.7e-11 Smith-Waterman score: 219; 39.1% identity (65.2% similar) in 92 aa overlap (2-89:1-91) 10 20 30 40 50 pF1KE1 MMGLSLASAVLLASLLSLHLGTAT----RGSDISKTCCFQYSHKPLPWTWVRSYEFTSNS : .:.: :. . :... ::: : :: . ::: :. .: . .: :... CCDS32 MKISVA-AIPFFLLITIALGTKTESSSRGPYHPSECCFTYTTYKIPRQRIMDYYETNSQ 10 20 30 40 50 60 70 80 90 pF1KE1 CSQRAVIFTTKRGKKVCTHPRKKWVQKYISLLKTPKQL ::. ...: ::::..:::.: :::: ::. .: CCDS32 CSKPGIVFITKRGHSVCTNPSDKWVQDYIKDMKEN 60 70 80 90 >>CCDS11281.1 CCL13 gene_id:6357|Hs108|chr17 (98 aa) initn: 242 init1: 209 opt: 216 Z-score: 307.5 bits: 61.7 E(32554): 8.3e-11 Smith-Waterman score: 216; 41.9% identity (65.1% similar) in 86 aa overlap (8-88:4-89) 10 20 30 40 50 pF1KE1 MMGLSLASAVLLASLLSLHL----GTATRGS-DISKTCCFQYSHKPLPWTWVRSYEFTSN ::::: :: : : . .. .:::: .: : . ..:: .:.. CCDS11 MKVSAVLLCLLLMTAAFNPQGLAQPDALNVPSTCCFTFSSKKISLQRLKSYVITTS 10 20 30 40 50 60 70 80 90 pF1KE1 SCSQRAVIFTTKRGKKVCTHPRKKWVQKYISLLKTPKQL : :.:::: :: ::..:. :..::::.:.. : CCDS11 RCPQKAVIFRTKLGKEICADPKEKWVQNYMKHLGRKAHTLKT 60 70 80 90 94 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 16:22:56 2016 done: Sun Nov 6 16:22:57 2016 Total Scan time: 1.470 Total Display time: -0.010 Function used was FASTA [36.3.4 Apr, 2011]