Result of FASTA (omim) for
pFN21AB9721
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB9721, 407 aa
1>>>pF1KB9721 407 - 407 aa - 407 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 8.6184+/-0.000339; mu= 5.2848+/- 0.021
mean_var=268.9493+/-54.772, 0's: 0 Z-trim(123.7): 213 B-trim: 0 in 0/60
Lambda= 0.078206
statistics sampled from 43829 (44092) to 43829 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.804), E-opt: 0.2 (0.517), width: 16
Scan time: 10.210
The best scores are: opt bits E(85289)
NP_001980 (OMIM: 142996) homeobox even-skipped hom ( 407) 2791 327.6 3.4e-89
NP_001291448 (OMIM: 142996) homeobox even-skipped ( 225) 1549 187.2 3.5e-47
NP_001291449 (OMIM: 142996) homeobox even-skipped ( 225) 1549 187.2 3.5e-47
NP_001073927 (OMIM: 142991) homeobox even-skipped ( 476) 1035 129.5 1.7e-29
XP_011523023 (OMIM: 142966) PREDICTED: homeobox pr ( 430) 356 52.9 1.8e-06
XP_005257334 (OMIM: 142966) PREDICTED: homeobox pr ( 431) 353 52.5 2.3e-06
NP_002137 (OMIM: 142966) homeobox protein Hox-B3 i ( 431) 353 52.5 2.3e-06
XP_006721917 (OMIM: 142966) PREDICTED: homeobox pr ( 431) 353 52.5 2.3e-06
XP_011523022 (OMIM: 142966) PREDICTED: homeobox pr ( 431) 353 52.5 2.3e-06
XP_011523021 (OMIM: 142966) PREDICTED: homeobox pr ( 431) 353 52.5 2.3e-06
XP_011523012 (OMIM: 142966) PREDICTED: homeobox pr ( 431) 353 52.5 2.3e-06
NP_001317251 (OMIM: 142966) homeobox protein Hox-B ( 358) 349 52.0 2.8e-06
XP_011523028 (OMIM: 142966) PREDICTED: homeobox pr ( 358) 349 52.0 2.8e-06
XP_016880046 (OMIM: 142966) PREDICTED: homeobox pr ( 578) 353 52.7 2.8e-06
XP_016880048 (OMIM: 142966) PREDICTED: homeobox pr ( 578) 353 52.7 2.8e-06
XP_011523009 (OMIM: 142966) PREDICTED: homeobox pr ( 578) 353 52.7 2.8e-06
XP_016880051 (OMIM: 142966) PREDICTED: homeobox pr ( 578) 353 52.7 2.8e-06
XP_016880049 (OMIM: 142966) PREDICTED: homeobox pr ( 578) 353 52.7 2.8e-06
XP_016880052 (OMIM: 142966) PREDICTED: homeobox pr ( 578) 353 52.7 2.8e-06
XP_016880047 (OMIM: 142966) PREDICTED: homeobox pr ( 578) 353 52.7 2.8e-06
XP_016880050 (OMIM: 142966) PREDICTED: homeobox pr ( 578) 353 52.7 2.8e-06
NP_001317252 (OMIM: 142966) homeobox protein Hox-B ( 299) 318 48.4 2.8e-05
XP_011523010 (OMIM: 142966) PREDICTED: homeobox pr ( 488) 318 48.6 3.8e-05
NP_036608 (OMIM: 604295) ventral anterior homeobox ( 290) 293 45.6 0.00019
NP_001092304 (OMIM: 603354) homeobox protein GBX-1 ( 363) 294 45.8 0.00021
XP_005246567 (OMIM: 142980) PREDICTED: homeobox pr ( 432) 294 45.9 0.00023
XP_005246568 (OMIM: 142980) PREDICTED: homeobox pr ( 432) 294 45.9 0.00023
XP_005246566 (OMIM: 142980) PREDICTED: homeobox pr ( 432) 294 45.9 0.00023
NP_008829 (OMIM: 142980) homeobox protein Hox-D3 [ ( 432) 294 45.9 0.00023
XP_005246570 (OMIM: 142980) PREDICTED: homeobox pr ( 432) 294 45.9 0.00023
XP_006712540 (OMIM: 142980) PREDICTED: homeobox pr ( 432) 294 45.9 0.00023
XP_011509368 (OMIM: 142980) PREDICTED: homeobox pr ( 432) 294 45.9 0.00023
XP_011509367 (OMIM: 142980) PREDICTED: homeobox pr ( 432) 294 45.9 0.00023
NP_620689 (OMIM: 300004,300215,300382,300419,30835 ( 562) 282 44.7 0.00071
NP_002136 (OMIM: 142967) homeobox protein Hox-B2 [ ( 356) 276 43.8 0.00083
NP_001180 (OMIM: 602183,613330) homeobox protein N ( 333) 271 43.2 0.0012
NP_001795 (OMIM: 600746) homeobox protein CDX-1 [H ( 265) 264 42.3 0.0017
NP_776272 (OMIM: 142975) homeobox protein Hox-C12 ( 282) 261 42.0 0.0023
NP_061815 (OMIM: 142992,612109) homeobox protein H ( 348) 261 42.1 0.0026
XP_005257332 (OMIM: 142967) PREDICTED: homeobox pr ( 247) 257 41.4 0.0029
NP_109377 (OMIM: 142954) homeobox protein Hox-A3 i ( 443) 260 42.1 0.0034
XP_005249789 (OMIM: 142954) PREDICTED: homeobox pr ( 443) 260 42.1 0.0034
NP_705895 (OMIM: 142954) homeobox protein Hox-A3 i ( 443) 260 42.1 0.0034
XP_005249787 (OMIM: 142954) PREDICTED: homeobox pr ( 443) 260 42.1 0.0034
XP_005249788 (OMIM: 142954) PREDICTED: homeobox pr ( 443) 260 42.1 0.0034
XP_011513645 (OMIM: 142954) PREDICTED: homeobox pr ( 443) 260 42.1 0.0034
XP_006715778 (OMIM: 142954) PREDICTED: homeobox pr ( 443) 260 42.1 0.0034
NP_061824 (OMIM: 142957) homeobox protein Hox-A10 ( 410) 259 41.9 0.0034
NP_001106175 (OMIM: 604294,614402) ventral anterio ( 334) 257 41.6 0.0035
NP_001129743 (OMIM: 217095,611770) homeobox protei ( 301) 256 41.4 0.0035
>>NP_001980 (OMIM: 142996) homeobox even-skipped homolog (407 aa)
initn: 2791 init1: 2791 opt: 2791 Z-score: 1722.2 bits: 327.6 E(85289): 3.4e-89
Smith-Waterman score: 2791; 100.0% identity (100.0% similar) in 407 aa overlap (1-407:1-407)
10 20 30 40 50 60
pF1KB9 MESRKDMVVFLDGGQLGTLVGKRVSNLSEAVGSPLPEPPEKMVPRGCLSPRAVPPATRER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MESRKDMVVFLDGGQLGTLVGKRVSNLSEAVGSPLPEPPEKMVPRGCLSPRAVPPATRER
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 GGGGPEEEPVDGLAGSAAGPGAEPQVAGAAMLGPGPPAPSVDSLSGQGQPSSSDTESDFY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GGGGPEEEPVDGLAGSAAGPGAEPQVAGAAMLGPGPPAPSVDSLSGQGQPSSSDTESDFY
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 EEIEVSCTPDCATGNAEYQHSKGSGSEALVGSPNGGSETPKSNGGSGGGGSQGTLACSAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EEIEVSCTPDCATGNAEYQHSKGSGSEALVGSPNGGSETPKSNGGSGGGGSQGTLACSAS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 DQMRRYRTAFTREQIARLEKEFYRENYVSRPRRCELAAALNLPETTIKVWFQNRRMKDKR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DQMRRYRTAFTREQIARLEKEFYRENYVSRPRRCELAAALNLPETTIKVWFQNRRMKDKR
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 QRLAMTWPHPADPAFYTYMMSHAAAAGGLPYPFPSHLPLPYYSPVGLGAASAASAAASPF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QRLAMTWPHPADPAFYTYMMSHAAAAGGLPYPFPSHLPLPYYSPVGLGAASAASAAASPF
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB9 SGSLRPLDTFRVLSQPYPRPELLCAFRHPPLYPGPAHGLGASAGGPCSCLACHSGPANGL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SGSLRPLDTFRVLSQPYPRPELLCAFRHPPLYPGPAHGLGASAGGPCSCLACHSGPANGL
310 320 330 340 350 360
370 380 390 400
pF1KB9 APRAAAASDFTCASTSRSDSFLTFAPSVLSKASSVALDQREEVPLTR
:::::::::::::::::::::::::::::::::::::::::::::::
NP_001 APRAAAASDFTCASTSRSDSFLTFAPSVLSKASSVALDQREEVPLTR
370 380 390 400
>>NP_001291448 (OMIM: 142996) homeobox even-skipped homo (225 aa)
initn: 1549 init1: 1549 opt: 1549 Z-score: 968.0 bits: 187.2 E(85289): 3.5e-47
Smith-Waterman score: 1549; 100.0% identity (100.0% similar) in 225 aa overlap (183-407:1-225)
160 170 180 190 200 210
pF1KB9 PNGGSETPKSNGGSGGGGSQGTLACSASDQMRRYRTAFTREQIARLEKEFYRENYVSRPR
::::::::::::::::::::::::::::::
NP_001 MRRYRTAFTREQIARLEKEFYRENYVSRPR
10 20 30
220 230 240 250 260 270
pF1KB9 RCELAAALNLPETTIKVWFQNRRMKDKRQRLAMTWPHPADPAFYTYMMSHAAAAGGLPYP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RCELAAALNLPETTIKVWFQNRRMKDKRQRLAMTWPHPADPAFYTYMMSHAAAAGGLPYP
40 50 60 70 80 90
280 290 300 310 320 330
pF1KB9 FPSHLPLPYYSPVGLGAASAASAAASPFSGSLRPLDTFRVLSQPYPRPELLCAFRHPPLY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FPSHLPLPYYSPVGLGAASAASAAASPFSGSLRPLDTFRVLSQPYPRPELLCAFRHPPLY
100 110 120 130 140 150
340 350 360 370 380 390
pF1KB9 PGPAHGLGASAGGPCSCLACHSGPANGLAPRAAAASDFTCASTSRSDSFLTFAPSVLSKA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PGPAHGLGASAGGPCSCLACHSGPANGLAPRAAAASDFTCASTSRSDSFLTFAPSVLSKA
160 170 180 190 200 210
400
pF1KB9 SSVALDQREEVPLTR
:::::::::::::::
NP_001 SSVALDQREEVPLTR
220
>>NP_001291449 (OMIM: 142996) homeobox even-skipped homo (225 aa)
initn: 1549 init1: 1549 opt: 1549 Z-score: 968.0 bits: 187.2 E(85289): 3.5e-47
Smith-Waterman score: 1549; 100.0% identity (100.0% similar) in 225 aa overlap (183-407:1-225)
160 170 180 190 200 210
pF1KB9 PNGGSETPKSNGGSGGGGSQGTLACSASDQMRRYRTAFTREQIARLEKEFYRENYVSRPR
::::::::::::::::::::::::::::::
NP_001 MRRYRTAFTREQIARLEKEFYRENYVSRPR
10 20 30
220 230 240 250 260 270
pF1KB9 RCELAAALNLPETTIKVWFQNRRMKDKRQRLAMTWPHPADPAFYTYMMSHAAAAGGLPYP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RCELAAALNLPETTIKVWFQNRRMKDKRQRLAMTWPHPADPAFYTYMMSHAAAAGGLPYP
40 50 60 70 80 90
280 290 300 310 320 330
pF1KB9 FPSHLPLPYYSPVGLGAASAASAAASPFSGSLRPLDTFRVLSQPYPRPELLCAFRHPPLY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FPSHLPLPYYSPVGLGAASAASAAASPFSGSLRPLDTFRVLSQPYPRPELLCAFRHPPLY
100 110 120 130 140 150
340 350 360 370 380 390
pF1KB9 PGPAHGLGASAGGPCSCLACHSGPANGLAPRAAAASDFTCASTSRSDSFLTFAPSVLSKA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PGPAHGLGASAGGPCSCLACHSGPANGLAPRAAAASDFTCASTSRSDSFLTFAPSVLSKA
160 170 180 190 200 210
400
pF1KB9 SSVALDQREEVPLTR
:::::::::::::::
NP_001 SSVALDQREEVPLTR
220
>>NP_001073927 (OMIM: 142991) homeobox even-skipped homo (476 aa)
initn: 1135 init1: 738 opt: 1035 Z-score: 650.6 bits: 129.5 E(85289): 1.7e-29
Smith-Waterman score: 1094; 49.1% identity (67.9% similar) in 411 aa overlap (4-368:6-408)
10 20 30 40 50
pF1KB9 MESRKDMVVFLDGGQLGTLVGKRVSNLSEAVGSPLPEPPEKMVPRGCLSPRAVPPATR
::.:.. .. : . .::: ::::...:. . : :. . :::: .: :
NP_001 MMERIRKEMIL-MERGLHSPTAGKRFSNLSNSAGNAVLEALENSQHPARLSPR-LPSAPL
10 20 30 40 50
60 70 80 90 100 110
pF1KB9 ERGGGGPEEEPVDGLAGSAAGPGAEPQVAGAAMLGPGPPAPSVDSLSGQGQPSSSDTESD
. . : : :. : . : .:. . . ...: . :. : . .:.:
NP_001 HSALG---ELPAKG--KFEIDTLFNLQHTGSESTVSSEISSAAESRKKPGHYSEAAAEAD
60 70 80 90 100 110
120 130 140 150 160
pF1KB9 FYEEIEVSCT----PDCATGNAEYQHSKG-----SGSEALVGSPNGGSETPKSNGGSGGG
. ..::.:. : . : :. ....: ::: : . . .:: . .:::::.
NP_001 MSSDVEVGCSALRSPG-GLGAAQLKENNGKGYAESGSAAGTTTSASGSGLGSLHGGSGGS
120 130 140 150 160 170
170 180 190 200 210 220
pF1KB9 GSQGTLACSAS--DQMRRYRTAFTREQIARLEKEFYRENYVSRPRRCELAAALNLPETTI
:....:. :.: ::.::::::::::::::::::::::::::::::::::::::::::::
NP_001 GGSAALGGSGSGADQVRRYRTAFTREQIARLEKEFYRENYVSRPRRCELAAALNLPETTI
180 190 200 210 220 230
230 240 250 260 270 280
pF1KB9 KVWFQNRRMKDKRQRLAMTWPHPADPAFYTYMMSHAAAAGGLPYPFPSHLPLPYYSPVGL
::::::::::::::::::.:::::::.::::::.::::.:.::::: ::.:: :: ::.
NP_001 KVWFQNRRMKDKRQRLAMSWPHPADPSFYTYMMTHAAATGSLPYPFHSHVPLHYYPHVGV
240 250 260 270 280 290
290 300 310 320 330 340
pF1KB9 GAASAASAAA-------SPFSGSLRPLDTFRVLSQPYPRPELLCAFRHPPLYPGPAHGLG
::.::.::. :::. :.:::::::.::.:: ::::::.:::: :: .:: . :
NP_001 TAAAAAAAASGAAAAASSPFATSIRPLDTFRALSHPYSRPELLCSFRHPGLYQAPAAAAG
300 310 320 330 340 350
350 360 370
pF1KB9 ----ASA----------------------GG--PCSCLACHSGPANGLAPRAAAASDFTC
::: :: :::::.:::. . . : ::::.
NP_001 LNSAASAAAAAAAAAAAASSAAAAGAPPSGGSAPCSCLSCHSSQSAAAAAAAAAAALGSR
360 370 380 390 400 410
380 390 400
pF1KB9 ASTSRSDSFLTFAPSVLSKASSVALDQREEVPLTR
NP_001 GGGGGGGGGGGGGGGGAGAGGGSDFGCSAAAPRSESGFLPYSAAVLSKTAVSPPDQRDEA
420 430 440 450 460 470
>>XP_011523023 (OMIM: 142966) PREDICTED: homeobox protei (430 aa)
initn: 288 init1: 288 opt: 356 Z-score: 237.1 bits: 52.9 E(85289): 1.8e-06
Smith-Waterman score: 382; 31.3% identity (52.2% similar) in 345 aa overlap (29-364:55-365)
10 20 30 40 50
pF1KB9 MESRKDMVVFLDGGQLGTLVGKRVSNLSEAVGSPLPEPPEKMVPRGCLSPRAVP-PAT
...:. :. : . .:. : .: : .
XP_011 NGFGFDVPPQPPFQAATHLEGDYQRSACSLQSLGNAAPHAKSKELNGSCMRPGLAPEPLS
30 40 50 60 70 80
60 70 80 90 100 110
pF1KB9 RERGGGGPEEEPVDGLAGSAAGPGAEPQVAGAAMLGPGPPAPSVDSLSGQGQPSSSDTES
:. : :... ..:. : : :. .: ::: . ..:. : : .....
XP_011 APPGSPPPSAAPTSATSNSSNGGG--PSKSGPPKCGPG----TNSTLTKQIFPWMKESRQ
90 100 110 120 130
120 130 140 150 160 170
pF1KB9 DFYEEIEVSCTPDCATGNAEYQHSKGSGSEALVGSPNGGSETPKSNGGSGGGGSQGTLAC
. . : :. :. :.:. :. .::: ::.::::. : .
XP_011 TSKLKNNSPGTEGCGGGG-------GGGG----GGGSGGS------GGGGGGGGGGDKSP
140 150 160 170 180
180 190 200 210 220 230
pF1KB9 SASDQMRRYRTAFTREQIARLEKEFYRENYVSRPRRCELAAALNLPETTIKVWFQNRRMK
.: .: :::.: :...:::::. . :. :::: :.: ::: : ::.::::::::
XP_011 PGSAASKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRRMK
190 200 210 220 230 240
240 250 260 270 280 290
pF1KB9 DKRQR----LAMT--WPHPADPAFYTYMMSHAAAAGGLPYPFPSHLPLPYYSPVGLGAAS
:... :: . : :: :.: :. ..: ::. : :: ..: :
XP_011 YKKDQKAKGLASSSGGPSPAGSPPQP-MQSTAGFMNALHSMTPSY-ESP--SPPAFGKAH
250 260 270 280 290
300 310 320 330 340
pF1KB9 AASAAASPFSGSLRPLDTFRVLSQ--PYPRPELLCAFRHPPLYPGPAHGLGASAGGPCSC
.: : : :. :: . .. : : :: : : :.: . :.:
XP_011 Q-NAYALP-SNYQPPLKGCGAPQKYPPTPAPEYE---PHVLQANGGAYGTPTMQGSP--V
300 310 320 330 340 350
350 360 370 380 390 400
pF1KB9 LACHSGPANGLAPRAAAASDFTCASTSRSDSFLTFAPSVLSKASSVALDQREEVPLTR
. .: :. : : :
XP_011 YVGGGGYADPLPPPAGPSLYGLNHLSHHPSGNLDYNGAPPMAPSQHHGPCEPHPTYTDLS
360 370 380 390 400 410
>>XP_005257334 (OMIM: 142966) PREDICTED: homeobox protei (431 aa)
initn: 288 init1: 288 opt: 353 Z-score: 235.3 bits: 52.5 E(85289): 2.3e-06
Smith-Waterman score: 387; 31.6% identity (52.8% similar) in 345 aa overlap (29-364:55-366)
10 20 30 40 50
pF1KB9 MESRKDMVVFLDGGQLGTLVGKRVSNLSEAVGSPLPEPPEKMVPRGCLSPRAVP-PAT
...:. :. : . .:. : .: : .
XP_005 NGFGFDVPPQPPFQAATHLEGDYQRSACSLQSLGNAAPHAKSKELNGSCMRPGLAPEPLS
30 40 50 60 70 80
60 70 80 90 100 110
pF1KB9 RERGGGGPEEEPVDGLAGSAAGPGAEPQVAGAAMLGPGPPAPSVDSLSGQGQPSSSDTES
:. : :... ..:. : : :. .: ::: . ..:. : : ....
XP_005 APPGSPPPSAAPTSATSNSSNGGG--PSKSGPPKCGPG----TNSTLTKQIFPWMKESR-
90 100 110 120 130
120 130 140 150 160 170
pF1KB9 DFYEEIEVSCTPDCATGNAEYQHSKGSGSEALVGSPNGGSETPKSNGGSGGGGSQGTLAC
..: . . :.:: . :.:. :. .::: ::.::::. : .
XP_005 ------QTSKLKNNSPGTAEGCGGGGGGGG---GGGSGGS------GGGGGGGGGGDKSP
140 150 160 170 180
180 190 200 210 220 230
pF1KB9 SASDQMRRYRTAFTREQIARLEKEFYRENYVSRPRRCELAAALNLPETTIKVWFQNRRMK
.: .: :::.: :...:::::. . :. :::: :.: ::: : ::.::::::::
XP_005 PGSAASKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRRMK
190 200 210 220 230 240
240 250 260 270 280 290
pF1KB9 DKRQR----LAMT--WPHPADPAFYTYMMSHAAAAGGLPYPFPSHLPLPYYSPVGLGAAS
:... :: . : :: :.: :. ..: ::. : :: ..: :
XP_005 YKKDQKAKGLASSSGGPSPAGSPPQP-MQSTAGFMNALHSMTPSY-ESP--SPPAFGKAH
250 260 270 280 290
300 310 320 330 340
pF1KB9 AASAAASPFSGSLRPLDTFRVLSQ--PYPRPELLCAFRHPPLYPGPAHGLGASAGGPCSC
.: : : :. :: . .. : : :: : : :.: . :.:
XP_005 Q-NAYALP-SNYQPPLKGCGAPQKYPPTPAPEYE---PHVLQANGGAYGTPTMQGSP--V
300 310 320 330 340 350
350 360 370 380 390 400
pF1KB9 LACHSGPANGLAPRAAAASDFTCASTSRSDSFLTFAPSVLSKASSVALDQREEVPLTR
. .: :. : : :
XP_005 YVGGGGYADPLPPPAGPSLYGLNHLSHHPSGNLDYNGAPPMAPSQHHGPCEPHPTYTDLS
360 370 380 390 400 410
>>NP_002137 (OMIM: 142966) homeobox protein Hox-B3 isofo (431 aa)
initn: 288 init1: 288 opt: 353 Z-score: 235.3 bits: 52.5 E(85289): 2.3e-06
Smith-Waterman score: 387; 31.6% identity (52.8% similar) in 345 aa overlap (29-364:55-366)
10 20 30 40 50
pF1KB9 MESRKDMVVFLDGGQLGTLVGKRVSNLSEAVGSPLPEPPEKMVPRGCLSPRAVP-PAT
...:. :. : . .:. : .: : .
NP_002 NGFGFDVPPQPPFQAATHLEGDYQRSACSLQSLGNAAPHAKSKELNGSCMRPGLAPEPLS
30 40 50 60 70 80
60 70 80 90 100 110
pF1KB9 RERGGGGPEEEPVDGLAGSAAGPGAEPQVAGAAMLGPGPPAPSVDSLSGQGQPSSSDTES
:. : :... ..:. : : :. .: ::: . ..:. : : ....
NP_002 APPGSPPPSAAPTSATSNSSNGGG--PSKSGPPKCGPG----TNSTLTKQIFPWMKESR-
90 100 110 120 130
120 130 140 150 160 170
pF1KB9 DFYEEIEVSCTPDCATGNAEYQHSKGSGSEALVGSPNGGSETPKSNGGSGGGGSQGTLAC
..: . . :.:: . :.:. :. .::: ::.::::. : .
NP_002 ------QTSKLKNNSPGTAEGCGGGGGGGG---GGGSGGS------GGGGGGGGGGDKSP
140 150 160 170 180
180 190 200 210 220 230
pF1KB9 SASDQMRRYRTAFTREQIARLEKEFYRENYVSRPRRCELAAALNLPETTIKVWFQNRRMK
.: .: :::.: :...:::::. . :. :::: :.: ::: : ::.::::::::
NP_002 PGSAASKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRRMK
190 200 210 220 230 240
240 250 260 270 280 290
pF1KB9 DKRQR----LAMT--WPHPADPAFYTYMMSHAAAAGGLPYPFPSHLPLPYYSPVGLGAAS
:... :: . : :: :.: :. ..: ::. : :: ..: :
NP_002 YKKDQKAKGLASSSGGPSPAGSPPQP-MQSTAGFMNALHSMTPSY-ESP--SPPAFGKAH
250 260 270 280 290
300 310 320 330 340
pF1KB9 AASAAASPFSGSLRPLDTFRVLSQ--PYPRPELLCAFRHPPLYPGPAHGLGASAGGPCSC
.: : : :. :: . .. : : :: : : :.: . :.:
NP_002 Q-NAYALP-SNYQPPLKGCGAPQKYPPTPAPEYE---PHVLQANGGAYGTPTMQGSP--V
300 310 320 330 340 350
350 360 370 380 390 400
pF1KB9 LACHSGPANGLAPRAAAASDFTCASTSRSDSFLTFAPSVLSKASSVALDQREEVPLTR
. .: :. : : :
NP_002 YVGGGGYADPLPPPAGPSLYGLNHLSHHPSGNLDYNGAPPMAPSQHHGPCEPHPTYTDLS
360 370 380 390 400 410
>>XP_006721917 (OMIM: 142966) PREDICTED: homeobox protei (431 aa)
initn: 288 init1: 288 opt: 353 Z-score: 235.3 bits: 52.5 E(85289): 2.3e-06
Smith-Waterman score: 387; 31.6% identity (52.8% similar) in 345 aa overlap (29-364:55-366)
10 20 30 40 50
pF1KB9 MESRKDMVVFLDGGQLGTLVGKRVSNLSEAVGSPLPEPPEKMVPRGCLSPRAVP-PAT
...:. :. : . .:. : .: : .
XP_006 NGFGFDVPPQPPFQAATHLEGDYQRSACSLQSLGNAAPHAKSKELNGSCMRPGLAPEPLS
30 40 50 60 70 80
60 70 80 90 100 110
pF1KB9 RERGGGGPEEEPVDGLAGSAAGPGAEPQVAGAAMLGPGPPAPSVDSLSGQGQPSSSDTES
:. : :... ..:. : : :. .: ::: . ..:. : : ....
XP_006 APPGSPPPSAAPTSATSNSSNGGG--PSKSGPPKCGPG----TNSTLTKQIFPWMKESR-
90 100 110 120 130
120 130 140 150 160 170
pF1KB9 DFYEEIEVSCTPDCATGNAEYQHSKGSGSEALVGSPNGGSETPKSNGGSGGGGSQGTLAC
..: . . :.:: . :.:. :. .::: ::.::::. : .
XP_006 ------QTSKLKNNSPGTAEGCGGGGGGGG---GGGSGGS------GGGGGGGGGGDKSP
140 150 160 170 180
180 190 200 210 220 230
pF1KB9 SASDQMRRYRTAFTREQIARLEKEFYRENYVSRPRRCELAAALNLPETTIKVWFQNRRMK
.: .: :::.: :...:::::. . :. :::: :.: ::: : ::.::::::::
XP_006 PGSAASKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRRMK
190 200 210 220 230 240
240 250 260 270 280 290
pF1KB9 DKRQR----LAMT--WPHPADPAFYTYMMSHAAAAGGLPYPFPSHLPLPYYSPVGLGAAS
:... :: . : :: :.: :. ..: ::. : :: ..: :
XP_006 YKKDQKAKGLASSSGGPSPAGSPPQP-MQSTAGFMNALHSMTPSY-ESP--SPPAFGKAH
250 260 270 280 290
300 310 320 330 340
pF1KB9 AASAAASPFSGSLRPLDTFRVLSQ--PYPRPELLCAFRHPPLYPGPAHGLGASAGGPCSC
.: : : :. :: . .. : : :: : : :.: . :.:
XP_006 Q-NAYALP-SNYQPPLKGCGAPQKYPPTPAPEYE---PHVLQANGGAYGTPTMQGSP--V
300 310 320 330 340 350
350 360 370 380 390 400
pF1KB9 LACHSGPANGLAPRAAAASDFTCASTSRSDSFLTFAPSVLSKASSVALDQREEVPLTR
. .: :. : : :
XP_006 YVGGGGYADPLPPPAGPSLYGLNHLSHHPSGNLDYNGAPPMAPSQHHGPCEPHPTYTDLS
360 370 380 390 400 410
>>XP_011523022 (OMIM: 142966) PREDICTED: homeobox protei (431 aa)
initn: 288 init1: 288 opt: 353 Z-score: 235.3 bits: 52.5 E(85289): 2.3e-06
Smith-Waterman score: 387; 31.6% identity (52.8% similar) in 345 aa overlap (29-364:55-366)
10 20 30 40 50
pF1KB9 MESRKDMVVFLDGGQLGTLVGKRVSNLSEAVGSPLPEPPEKMVPRGCLSPRAVP-PAT
...:. :. : . .:. : .: : .
XP_011 NGFGFDVPPQPPFQAATHLEGDYQRSACSLQSLGNAAPHAKSKELNGSCMRPGLAPEPLS
30 40 50 60 70 80
60 70 80 90 100 110
pF1KB9 RERGGGGPEEEPVDGLAGSAAGPGAEPQVAGAAMLGPGPPAPSVDSLSGQGQPSSSDTES
:. : :... ..:. : : :. .: ::: . ..:. : : ....
XP_011 APPGSPPPSAAPTSATSNSSNGGG--PSKSGPPKCGPG----TNSTLTKQIFPWMKESR-
90 100 110 120 130
120 130 140 150 160 170
pF1KB9 DFYEEIEVSCTPDCATGNAEYQHSKGSGSEALVGSPNGGSETPKSNGGSGGGGSQGTLAC
..: . . :.:: . :.:. :. .::: ::.::::. : .
XP_011 ------QTSKLKNNSPGTAEGCGGGGGGGG---GGGSGGS------GGGGGGGGGGDKSP
140 150 160 170 180
180 190 200 210 220 230
pF1KB9 SASDQMRRYRTAFTREQIARLEKEFYRENYVSRPRRCELAAALNLPETTIKVWFQNRRMK
.: .: :::.: :...:::::. . :. :::: :.: ::: : ::.::::::::
XP_011 PGSAASKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRRMK
190 200 210 220 230 240
240 250 260 270 280 290
pF1KB9 DKRQR----LAMT--WPHPADPAFYTYMMSHAAAAGGLPYPFPSHLPLPYYSPVGLGAAS
:... :: . : :: :.: :. ..: ::. : :: ..: :
XP_011 YKKDQKAKGLASSSGGPSPAGSPPQP-MQSTAGFMNALHSMTPSY-ESP--SPPAFGKAH
250 260 270 280 290
300 310 320 330 340
pF1KB9 AASAAASPFSGSLRPLDTFRVLSQ--PYPRPELLCAFRHPPLYPGPAHGLGASAGGPCSC
.: : : :. :: . .. : : :: : : :.: . :.:
XP_011 Q-NAYALP-SNYQPPLKGCGAPQKYPPTPAPEYE---PHVLQANGGAYGTPTMQGSP--V
300 310 320 330 340 350
350 360 370 380 390 400
pF1KB9 LACHSGPANGLAPRAAAASDFTCASTSRSDSFLTFAPSVLSKASSVALDQREEVPLTR
. .: :. : : :
XP_011 YVGGGGYADPLPPPAGPSLYGLNHLSHHPSGNLDYNGAPPMAPSQHHGPCEPHPTYTDLS
360 370 380 390 400 410
>>XP_011523021 (OMIM: 142966) PREDICTED: homeobox protei (431 aa)
initn: 288 init1: 288 opt: 353 Z-score: 235.3 bits: 52.5 E(85289): 2.3e-06
Smith-Waterman score: 387; 31.6% identity (52.8% similar) in 345 aa overlap (29-364:55-366)
10 20 30 40 50
pF1KB9 MESRKDMVVFLDGGQLGTLVGKRVSNLSEAVGSPLPEPPEKMVPRGCLSPRAVP-PAT
...:. :. : . .:. : .: : .
XP_011 NGFGFDVPPQPPFQAATHLEGDYQRSACSLQSLGNAAPHAKSKELNGSCMRPGLAPEPLS
30 40 50 60 70 80
60 70 80 90 100 110
pF1KB9 RERGGGGPEEEPVDGLAGSAAGPGAEPQVAGAAMLGPGPPAPSVDSLSGQGQPSSSDTES
:. : :... ..:. : : :. .: ::: . ..:. : : ....
XP_011 APPGSPPPSAAPTSATSNSSNGGG--PSKSGPPKCGPG----TNSTLTKQIFPWMKESR-
90 100 110 120 130
120 130 140 150 160 170
pF1KB9 DFYEEIEVSCTPDCATGNAEYQHSKGSGSEALVGSPNGGSETPKSNGGSGGGGSQGTLAC
..: . . :.:: . :.:. :. .::: ::.::::. : .
XP_011 ------QTSKLKNNSPGTAEGCGGGGGGGG---GGGSGGS------GGGGGGGGGGDKSP
140 150 160 170 180
180 190 200 210 220 230
pF1KB9 SASDQMRRYRTAFTREQIARLEKEFYRENYVSRPRRCELAAALNLPETTIKVWFQNRRMK
.: .: :::.: :...:::::. . :. :::: :.: ::: : ::.::::::::
XP_011 PGSAASKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRRMK
190 200 210 220 230 240
240 250 260 270 280 290
pF1KB9 DKRQR----LAMT--WPHPADPAFYTYMMSHAAAAGGLPYPFPSHLPLPYYSPVGLGAAS
:... :: . : :: :.: :. ..: ::. : :: ..: :
XP_011 YKKDQKAKGLASSSGGPSPAGSPPQP-MQSTAGFMNALHSMTPSY-ESP--SPPAFGKAH
250 260 270 280 290
300 310 320 330 340
pF1KB9 AASAAASPFSGSLRPLDTFRVLSQ--PYPRPELLCAFRHPPLYPGPAHGLGASAGGPCSC
.: : : :. :: . .. : : :: : : :.: . :.:
XP_011 Q-NAYALP-SNYQPPLKGCGAPQKYPPTPAPEYE---PHVLQANGGAYGTPTMQGSP--V
300 310 320 330 340 350
350 360 370 380 390 400
pF1KB9 LACHSGPANGLAPRAAAASDFTCASTSRSDSFLTFAPSVLSKASSVALDQREEVPLTR
. .: :. : : :
XP_011 YVGGGGYADPLPPPAGPSLYGLNHLSHHPSGNLDYNGAPPMAPSQHHGPCEPHPTYTDLS
360 370 380 390 400 410
407 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 16:25:51 2016 done: Sun Nov 6 16:25:52 2016
Total Scan time: 10.210 Total Display time: 0.030
Function used was FASTA [36.3.4 Apr, 2011]