FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE6163, 55 aa 1>>>pF1KE6163 55 - 55 aa - 55 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 3.8850+/-0.000211; mu= 12.4975+/- 0.013 mean_var=36.2922+/- 7.365, 0's: 0 Z-trim(124.5): 10 B-trim: 71 in 1/59 Lambda= 0.212896 statistics sampled from 46278 (46289) to 46278 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.896), E-opt: 0.2 (0.543), width: 16 Scan time: 3.000 The best scores are: opt bits E(85289) NP_061932 (OMIM: 607980) mitochondrial import rece ( 55) 376 120.1 1.8e-28 >>NP_061932 (OMIM: 607980) mitochondrial import receptor (55 aa) initn: 376 init1: 376 opt: 376 Z-score: 632.3 bits: 120.1 E(85289): 1.8e-28 Smith-Waterman score: 376; 100.0% identity (100.0% similar) in 55 aa overlap (1-55:1-55) 10 20 30 40 50 pF1KE6 MVKLSKEAKQRLQQLFKGSQFAIRWGFIPLVIYLGFKRGADPGMPEPTVLSLLWG ::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_061 MVKLSKEAKQRLQQLFKGSQFAIRWGFIPLVIYLGFKRGADPGMPEPTVLSLLWG 10 20 30 40 50 55 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 09:59:15 2016 done: Tue Nov 8 09:59:15 2016 Total Scan time: 3.000 Total Display time: -0.030 Function used was FASTA [36.3.4 Apr, 2011]