FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE6531, 198 aa 1>>>pF1KE6531 198 - 198 aa - 198 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.5834+/-0.000348; mu= 13.3282+/- 0.022 mean_var=73.9259+/-14.582, 0's: 0 Z-trim(115.3): 13 B-trim: 747 in 1/51 Lambda= 0.149168 statistics sampled from 25720 (25732) to 25720 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.672), E-opt: 0.2 (0.302), width: 16 Scan time: 4.740 The best scores are: opt bits E(85289) NP_777570 (OMIM: 186977) tctex1 domain-containing ( 198) 1301 288.6 4.5e-78 XP_011534395 (OMIM: 186977) PREDICTED: tctex1 doma ( 198) 1301 288.6 4.5e-78 XP_006715617 (OMIM: 186977) PREDICTED: tctex1 doma ( 138) 471 109.9 2e-24 XP_011539678 (OMIM: 611713) PREDICTED: tctex1 doma ( 221) 198 51.2 1.4e-06 XP_011539677 (OMIM: 611713) PREDICTED: tctex1 doma ( 221) 198 51.2 1.4e-06 NP_001013654 (OMIM: 611713) tctex1 domain-containi ( 221) 198 51.2 1.4e-06 XP_016856676 (OMIM: 611713) PREDICTED: tctex1 doma ( 262) 198 51.3 1.6e-06 XP_006710677 (OMIM: 611713) PREDICTED: tctex1 doma ( 279) 198 51.3 1.7e-06 >>NP_777570 (OMIM: 186977) tctex1 domain-containing prot (198 aa) initn: 1301 init1: 1301 opt: 1301 Z-score: 1522.6 bits: 288.6 E(85289): 4.5e-78 Smith-Waterman score: 1301; 100.0% identity (100.0% similar) in 198 aa overlap (1-198:1-198) 10 20 30 40 50 60 pF1KE6 MEKRGRGVKSSPIQTPNQTPQQAPVTPRKERRPSMFEKEAYTQILRERLRESIHNVQYVE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_777 MEKRGRGVKSSPIQTPNQTPQQAPVTPRKERRPSMFEKEAYTQILRERLRESIHNVQYVE 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 PPFDDSIADIGKEWKSALAKLKFANSYRMEPLKKFQAHSVETKVQQILTESLKDVKYDDK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_777 PPFDDSIADIGKEWKSALAKLKFANSYRMEPLKKFQAHSVETKVQQILTESLKDVKYDDK 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE6 VFSHLSLELADRILLAVKEFGYHRYKFIIKVLFIQKTGQAINIASRWIWDIAWDSWVAAK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_777 VFSHLSLELADRILLAVKEFGYHRYKFIIKVLFIQKTGQAINIASRWIWDIAWDSWVAAK 130 140 150 160 170 180 190 pF1KE6 HEAESYVALVLVFALYYE :::::::::::::::::: NP_777 HEAESYVALVLVFALYYE 190 >>XP_011534395 (OMIM: 186977) PREDICTED: tctex1 domain-c (198 aa) initn: 1301 init1: 1301 opt: 1301 Z-score: 1522.6 bits: 288.6 E(85289): 4.5e-78 Smith-Waterman score: 1301; 100.0% identity (100.0% similar) in 198 aa overlap (1-198:1-198) 10 20 30 40 50 60 pF1KE6 MEKRGRGVKSSPIQTPNQTPQQAPVTPRKERRPSMFEKEAYTQILRERLRESIHNVQYVE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 MEKRGRGVKSSPIQTPNQTPQQAPVTPRKERRPSMFEKEAYTQILRERLRESIHNVQYVE 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 PPFDDSIADIGKEWKSALAKLKFANSYRMEPLKKFQAHSVETKVQQILTESLKDVKYDDK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 PPFDDSIADIGKEWKSALAKLKFANSYRMEPLKKFQAHSVETKVQQILTESLKDVKYDDK 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE6 VFSHLSLELADRILLAVKEFGYHRYKFIIKVLFIQKTGQAINIASRWIWDIAWDSWVAAK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 VFSHLSLELADRILLAVKEFGYHRYKFIIKVLFIQKTGQAINIASRWIWDIAWDSWVAAK 130 140 150 160 170 180 190 pF1KE6 HEAESYVALVLVFALYYE :::::::::::::::::: XP_011 HEAESYVALVLVFALYYE 190 >>XP_006715617 (OMIM: 186977) PREDICTED: tctex1 domain-c (138 aa) initn: 505 init1: 471 opt: 471 Z-score: 559.6 bits: 109.9 E(85289): 2e-24 Smith-Waterman score: 792; 69.7% identity (69.7% similar) in 198 aa overlap (1-198:1-138) 10 20 30 40 50 60 pF1KE6 MEKRGRGVKSSPIQTPNQTPQQAPVTPRKERRPSMFEKEAYTQILRERLRESIHNVQYVE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 MEKRGRGVKSSPIQTPNQTPQQAPVTPRKERRPSMFEKEAYTQILRERLRESIHNVQYVE 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 PPFDDSIADIGKEWKSALAKLKFANSYRMEPLKKFQAHSVETKVQQILTESLKDVKYDDK :::::::::: XP_006 PPFDDSIADI-------------------------------------------------- 70 130 140 150 160 170 180 pF1KE6 VFSHLSLELADRILLAVKEFGYHRYKFIIKVLFIQKTGQAINIASRWIWDIAWDSWVAAK :::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 ----------DRILLAVKEFGYHRYKFIIKVLFIQKTGQAINIASRWIWDIAWDSWVAAK 80 90 100 110 120 190 pF1KE6 HEAESYVALVLVFALYYE :::::::::::::::::: XP_006 HEAESYVALVLVFALYYE 130 >>XP_011539678 (OMIM: 611713) PREDICTED: tctex1 domain-c (221 aa) initn: 187 init1: 146 opt: 198 Z-score: 239.1 bits: 51.2 E(85289): 1.4e-06 Smith-Waterman score: 198; 27.0% identity (65.2% similar) in 141 aa overlap (61-198:85-221) 40 50 60 70 80 pF1KE6 RRPSMFEKEAYTQILRERLRESIHNVQYVEPPFDDSIADIGKEWKSALAKLKF-ANSYRM ::. . .. : :: .. : ::: XP_011 LGLAASFSRRNSLVGPGAGPGGQRPSLGPVPPLGSRVSFSGLP----LAPARWVAPSYRT 60 70 80 90 100 110 90 100 110 120 130 140 pF1KE6 EPL--KKFQAHSVETKVQQILTESLKDVKYDDKVFSHLSLELADRILLAVKEFGYHRYKF ::. ....: .. .. :. .:.:. :.. ..: :: ... . ..:.. :::. XP_011 EPVPGERWEAARAQRALEAALAAGLHDACYSSDEAARLVRELCEQVHVRLRELSPPRYKL 120 130 140 150 160 170 150 160 170 180 190 pF1KE6 IIKVLFIQKTGQAINIASRWIWDIAWDSWVAAKHEAESYVALVLVFALYYE . .:.. ..::.....:: .::.: :. ..... : :.. : .:: : XP_011 VCSVVLGPRAGQGVHVVSRALWDVARDGLASVSYTNTSLFAVATVHGLYCE 180 190 200 210 220 >>XP_011539677 (OMIM: 611713) PREDICTED: tctex1 domain-c (221 aa) initn: 187 init1: 146 opt: 198 Z-score: 239.1 bits: 51.2 E(85289): 1.4e-06 Smith-Waterman score: 198; 27.0% identity (65.2% similar) in 141 aa overlap (61-198:85-221) 40 50 60 70 80 pF1KE6 RRPSMFEKEAYTQILRERLRESIHNVQYVEPPFDDSIADIGKEWKSALAKLKF-ANSYRM ::. . .. : :: .. : ::: XP_011 LGLAASFSRRNSLVGPGAGPGGQRPSLGPVPPLGSRVSFSGLP----LAPARWVAPSYRT 60 70 80 90 100 110 90 100 110 120 130 140 pF1KE6 EPL--KKFQAHSVETKVQQILTESLKDVKYDDKVFSHLSLELADRILLAVKEFGYHRYKF ::. ....: .. .. :. .:.:. :.. ..: :: ... . ..:.. :::. XP_011 EPVPGERWEAARAQRALEAALAAGLHDACYSSDEAARLVRELCEQVHVRLRELSPPRYKL 120 130 140 150 160 170 150 160 170 180 190 pF1KE6 IIKVLFIQKTGQAINIASRWIWDIAWDSWVAAKHEAESYVALVLVFALYYE . .:.. ..::.....:: .::.: :. ..... : :.. : .:: : XP_011 VCSVVLGPRAGQGVHVVSRALWDVARDGLASVSYTNTSLFAVATVHGLYCE 180 190 200 210 220 >>NP_001013654 (OMIM: 611713) tctex1 domain-containing p (221 aa) initn: 187 init1: 146 opt: 198 Z-score: 239.1 bits: 51.2 E(85289): 1.4e-06 Smith-Waterman score: 198; 27.0% identity (65.2% similar) in 141 aa overlap (61-198:85-221) 40 50 60 70 80 pF1KE6 RRPSMFEKEAYTQILRERLRESIHNVQYVEPPFDDSIADIGKEWKSALAKLKF-ANSYRM ::. . .. : :: .. : ::: NP_001 LGLAASFSRRNSLVGPGAGPGGQRPSLGPVPPLGSRVSFSGLP----LAPARWVAPSYRT 60 70 80 90 100 110 90 100 110 120 130 140 pF1KE6 EPL--KKFQAHSVETKVQQILTESLKDVKYDDKVFSHLSLELADRILLAVKEFGYHRYKF ::. ....: .. .. :. .:.:. :.. ..: :: ... . ..:.. :::. NP_001 EPVPGERWEAARAQRALEAALAAGLHDACYSSDEAARLVRELCEQVHVRLRELSPPRYKL 120 130 140 150 160 170 150 160 170 180 190 pF1KE6 IIKVLFIQKTGQAINIASRWIWDIAWDSWVAAKHEAESYVALVLVFALYYE . .:.. ..::.....:: .::.: :. ..... : :.. : .:: : NP_001 VCSVVLGPRAGQGVHVVSRALWDVARDGLASVSYTNTSLFAVATVHGLYCE 180 190 200 210 220 >>XP_016856676 (OMIM: 611713) PREDICTED: tctex1 domain-c (262 aa) initn: 187 init1: 146 opt: 198 Z-score: 238.0 bits: 51.3 E(85289): 1.6e-06 Smith-Waterman score: 198; 27.0% identity (65.2% similar) in 141 aa overlap (61-198:126-262) 40 50 60 70 80 pF1KE6 RRPSMFEKEAYTQILRERLRESIHNVQYVEPPFDDSIADIGKEWKSALAKLKF-ANSYRM ::. . .. : :: .. : ::: XP_016 LGLAASFSRRNSLVGPGAGPGGQRPSLGPVPPLGSRVSFSGLP----LAPARWVAPSYRT 100 110 120 130 140 150 90 100 110 120 130 140 pF1KE6 EPL--KKFQAHSVETKVQQILTESLKDVKYDDKVFSHLSLELADRILLAVKEFGYHRYKF ::. ....: .. .. :. .:.:. :.. ..: :: ... . ..:.. :::. XP_016 EPVPGERWEAARAQRALEAALAAGLHDACYSSDEAARLVRELCEQVHVRLRELSPPRYKL 160 170 180 190 200 210 150 160 170 180 190 pF1KE6 IIKVLFIQKTGQAINIASRWIWDIAWDSWVAAKHEAESYVALVLVFALYYE . .:.. ..::.....:: .::.: :. ..... : :.. : .:: : XP_016 VCSVVLGPRAGQGVHVVSRALWDVARDGLASVSYTNTSLFAVATVHGLYCE 220 230 240 250 260 >>XP_006710677 (OMIM: 611713) PREDICTED: tctex1 domain-c (279 aa) initn: 187 init1: 146 opt: 198 Z-score: 237.6 bits: 51.3 E(85289): 1.7e-06 Smith-Waterman score: 198; 27.0% identity (65.2% similar) in 141 aa overlap (61-198:143-279) 40 50 60 70 80 pF1KE6 RRPSMFEKEAYTQILRERLRESIHNVQYVEPPFDDSIADIGKEWKSALAKLKF-ANSYRM ::. . .. : :: .. : ::: XP_006 LGLAASFSRRNSLVGPGAGPGGQRPSLGPVPPLGSRVSFSGLP----LAPARWVAPSYRT 120 130 140 150 160 90 100 110 120 130 140 pF1KE6 EPL--KKFQAHSVETKVQQILTESLKDVKYDDKVFSHLSLELADRILLAVKEFGYHRYKF ::. ....: .. .. :. .:.:. :.. ..: :: ... . ..:.. :::. XP_006 EPVPGERWEAARAQRALEAALAAGLHDACYSSDEAARLVRELCEQVHVRLRELSPPRYKL 170 180 190 200 210 220 150 160 170 180 190 pF1KE6 IIKVLFIQKTGQAINIASRWIWDIAWDSWVAAKHEAESYVALVLVFALYYE . .:.. ..::.....:: .::.: :. ..... : :.. : .:: : XP_006 VCSVVLGPRAGQGVHVVSRALWDVARDGLASVSYTNTSLFAVATVHGLYCE 230 240 250 260 270 198 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 14:09:05 2016 done: Tue Nov 8 14:09:06 2016 Total Scan time: 4.740 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]