FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE1741, 244 aa 1>>>pF1KE1741 244 - 244 aa - 244 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 4.6006+/-0.000294; mu= 19.0661+/- 0.018 mean_var=63.9622+/-12.892, 0's: 0 Z-trim(118.0): 74 B-trim: 66 in 1/57 Lambda= 0.160366 statistics sampled from 30394 (30468) to 30394 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.739), E-opt: 0.2 (0.357), width: 16 Scan time: 6.270 The best scores are: opt bits E(85289) NP_078794 (OMIM: 605699) NKG2D ligand 3 [Homo sapi ( 244) 1700 401.2 8.4e-112 NP_079494 (OMIM: 605697) NKG2D ligand 1 isoform 1 ( 244) 900 216.1 4.4e-56 XP_011534102 (OMIM: 609244) PREDICTED: retinoic ac ( 297) 848 204.2 2.1e-52 NP_001001788 (OMIM: 609244) retinoic acid early tr ( 334) 848 204.2 2.3e-52 XP_016866320 (OMIM: 609244) PREDICTED: retinoic ac ( 338) 848 204.2 2.3e-52 XP_011533788 (OMIM: 611047) PREDICTED: retinoic ac ( 246) 823 198.3 1e-50 NP_570970 (OMIM: 611047) retinoic acid early trans ( 246) 823 198.3 1e-50 NP_079493 (OMIM: 605698) NKG2D ligand 2 preproprot ( 246) 816 196.7 3.1e-50 XP_016866810 (OMIM: 605698) PREDICTED: NKG2D ligan ( 211) 730 176.8 2.7e-44 XP_016866811 (OMIM: 605697) PREDICTED: NKG2D ligan ( 211) 723 175.1 8.4e-44 XP_011533780 (OMIM: 609243) PREDICTED: NKG2D ligan ( 255) 528 130.1 3.7e-30 XP_016865775 (OMIM: 609243) PREDICTED: NKG2D ligan ( 257) 528 130.1 3.7e-30 XP_016865776 (OMIM: 609243) PREDICTED: NKG2D ligan ( 257) 528 130.1 3.7e-30 XP_016865774 (OMIM: 609243) PREDICTED: NKG2D ligan ( 257) 528 130.1 3.7e-30 NP_631904 (OMIM: 609243) NKG2D ligand 4 isoform 1 ( 263) 528 130.1 3.7e-30 XP_011533777 (OMIM: 609243) PREDICTED: NKG2D ligan ( 271) 528 130.1 3.8e-30 XP_011533778 (OMIM: 609243) PREDICTED: NKG2D ligan ( 271) 528 130.1 3.8e-30 NP_001230256 (OMIM: 609243) NKG2D ligand 4 isoform ( 209) 511 126.1 4.8e-29 NP_001230257 (OMIM: 609243) NKG2D ligand 4 isoform ( 212) 511 126.1 4.9e-29 XP_011533781 (OMIM: 609243) PREDICTED: NKG2D ligan ( 212) 511 126.1 4.9e-29 NP_001230254 (OMIM: 609243) NKG2D ligand 4 isoform ( 227) 416 104.1 2.1e-22 XP_016865777 (OMIM: 609243) PREDICTED: NKG2D ligan ( 202) 407 102.0 8.2e-22 NP_001522 (OMIM: 600764) major histocompatibility ( 341) 282 73.3 6.2e-13 NP_001181929 (OMIM: 600764) major histocompatibili ( 249) 267 69.7 5.4e-12 NP_001181964 (OMIM: 600764) major histocompatibili ( 214) 263 68.7 9.2e-12 XP_006711349 (OMIM: 600764) PREDICTED: major histo ( 312) 263 68.9 1.2e-11 NP_002107 (OMIM: 142800,608579) HLA class I histoc ( 365) 251 66.1 9.3e-11 NP_001297142 (OMIM: 600764) major histocompatibili ( 178) 240 63.3 3.2e-10 XP_016866297 (OMIM: 143010) PREDICTED: HLA class I ( 399) 243 64.3 3.6e-10 XP_016866296 (OMIM: 143010) PREDICTED: HLA class I ( 399) 243 64.3 3.6e-10 NP_005507 (OMIM: 143010) HLA class I histocompatib ( 358) 242 64.1 3.9e-10 XP_016866298 (OMIM: 143010) PREDICTED: HLA class I ( 359) 242 64.1 3.9e-10 NP_001229687 (OMIM: 142800,608579) HLA class I his ( 365) 232 61.7 2e-09 XP_011512859 (OMIM: 106300,142830,608579) PREDICTE ( 323) 230 61.2 2.5e-09 NP_005505 (OMIM: 106300,142830,608579) major histo ( 362) 230 61.3 2.7e-09 XP_016885777 (OMIM: 142800,608579) PREDICTED: HLA ( 362) 226 60.4 5.1e-09 XP_005275388 (OMIM: 142800,608579) PREDICTED: HLA ( 391) 226 60.4 5.4e-09 NP_001176 (OMIM: 194460) zinc-alpha-2-glycoprotein ( 298) 221 59.1 9.9e-09 NP_001170990 (OMIM: 600169) MHC class I polypeptid ( 332) 210 56.6 6.2e-08 NP_001129491 (OMIM: 601437) IgG receptor FcRn larg ( 365) 209 56.4 7.9e-08 NP_004098 (OMIM: 601437) IgG receptor FcRn large s ( 365) 209 56.4 7.9e-08 NP_005922 (OMIM: 602436) MHC class I polypeptide-r ( 383) 209 56.4 8.1e-08 XP_011507765 (OMIM: 600764) PREDICTED: major histo ( 254) 205 55.4 1.1e-07 NP_001287678 (OMIM: 104300,176100,176200,235200,61 ( 337) 199 54.1 3.7e-07 NP_000401 (OMIM: 104300,176100,176200,235200,61263 ( 348) 199 54.1 3.8e-07 XP_011512845 (OMIM: 104300,176100,176200,235200,61 ( 348) 199 54.1 3.8e-07 NP_000238 (OMIM: 600169) MHC class I polypeptide-r ( 383) 198 53.9 4.8e-07 NP_002118 (OMIM: 142871,600807) HLA class I histoc ( 338) 192 52.5 1.1e-06 XP_016866305 (OMIM: 142871,600807) PREDICTED: HLA ( 343) 192 52.5 1.1e-06 NP_002108 (OMIM: 142840,177900,609423) HLA class I ( 366) 191 52.3 1.4e-06 >>NP_078794 (OMIM: 605699) NKG2D ligand 3 [Homo sapiens] (244 aa) initn: 1700 init1: 1700 opt: 1700 Z-score: 2128.2 bits: 401.2 E(85289): 8.4e-112 Smith-Waterman score: 1700; 100.0% identity (100.0% similar) in 244 aa overlap (1-244:1-244) 10 20 30 40 50 60 pF1KE1 MAAAASPAILPRLAILPYLLFDWSGTGRADAHSLWYNFTIIHLPRHGQQWCEVQSQVDQK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_078 MAAAASPAILPRLAILPYLLFDWSGTGRADAHSLWYNFTIIHLPRHGQQWCEVQSQVDQK 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 NFLSYDCGSDKVLSMGHLEEQLYATDAWGKQLEMLREVGQRLRLELADTELEDFTPSGPL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_078 NFLSYDCGSDKVLSMGHLEEQLYATDAWGKQLEMLREVGQRLRLELADTELEDFTPSGPL 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 TLQVRMSCECEADGYIRGSWQFSFDGRKFLLFDSNNRKWTVVHAGARRMKEKWEKDSGLT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_078 TLQVRMSCECEADGYIRGSWQFSFDGRKFLLFDSNNRKWTVVHAGARRMKEKWEKDSGLT 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 TFFKMVSMRDCKSWLRDFLMHRKKRLEPTAPPTMAPGLAQPKAIATTLSPWSFLIILCFI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_078 TFFKMVSMRDCKSWLRDFLMHRKKRLEPTAPPTMAPGLAQPKAIATTLSPWSFLIILCFI 190 200 210 220 230 240 pF1KE1 LPGI :::: NP_078 LPGI >>NP_079494 (OMIM: 605697) NKG2D ligand 1 isoform 1 prec (244 aa) initn: 921 init1: 828 opt: 900 Z-score: 1127.9 bits: 216.1 E(85289): 4.4e-56 Smith-Waterman score: 900; 54.9% identity (76.6% similar) in 244 aa overlap (1-243:1-243) 10 20 30 40 50 60 pF1KE1 MAAAASPAILPRLAILPYLLFDWSGTGRADAHSLWYNFTIIHLPRHGQQWCEVQSQVDQK ::::::::.: : .: .:: :: .: .:.: : :.: : : ::::::. ::.. NP_079 MAAAASPAFLLCLPLL-HLLSGWSRAGWVDTHCLCYDFIITPKSRPEPQWCEVQGLVDER 10 20 30 40 50 70 80 90 100 110 120 pF1KE1 NFLSYDCGSDKVLSMGHLEEQLYATDAWGKQLEMLREVGQRLRLELADTELEDFTPSGPL :: ::: . :. ... : ... .: .: .: : ::.: . :. .: : ..:.. : :: NP_079 PFLHYDCVNHKAKAFASLGKKVNVTKTWEEQTETLRDVVDFLKGQLLDIQVENLIPIEPL 60 70 80 90 100 110 130 140 150 160 170 180 pF1KE1 TLQVRMSCECEADGYIRGSWQFSFDGRKFLLFDSNNRKWTVVHAGARRMKEKWEKDSGLT :::.::::: :: :. :::::: :.:.:::::::::::::..: ::..: :::::. .: NP_079 TLQARMSCEHEAHGHGRGSWQFLFNGQKFLLFDSNNRKWTALHPGAKKMTEKWEKNRDVT 120 130 140 150 160 170 190 200 210 220 230 pF1KE1 TFFKMVSMRDCKSWLRDFLMHRKKRLEPTAPPTMAPGLAQPKAIATTLSPWSFLII-LCF ::. .:. ::: ::..:::. .. :.:: ::..::: .::::.::::::::.::: ::: NP_079 MFFQKISLGDCKMWLEEFLMYWEQMLDPTKPPSLAPGTTQPKAMATTLSPWSLLIIFLCF 180 190 200 210 220 230 240 pF1KE1 ILPGI :: : NP_079 ILAGR 240 >>XP_011534102 (OMIM: 609244) PREDICTED: retinoic acid e (297 aa) initn: 708 init1: 708 opt: 848 Z-score: 1061.7 bits: 204.2 E(85289): 2.1e-52 Smith-Waterman score: 848; 54.7% identity (74.5% similar) in 243 aa overlap (1-241:1-241) 10 20 30 40 50 60 pF1KE1 MAAAASPAILPRLAILPYLLFDWSGTGRADAHSLWYNFTIIHLPRHGQQWCEVQSQVDQK ::::::::.: :: .: :: .: :: :: ::: :..:.: : : .:: ::.:::.: XP_011 MAAAASPAFLLRLPLL-LLLSSWCRTGLADPHSLCYDITVIPKFRPGPRWCAVQGQVDEK 10 20 30 40 50 70 80 90 100 110 120 pF1KE1 NFLSYDCGSDKVLSMGHLEEQLYATDAWGKQLEMLREVGQRLRLELADTELEDFTPSGPL .:: ::::: : .. : ..: .: :: : .:::: . : .: : .::.. :. :: XP_011 TFLHYDCGSKTVTPVSPLGKKLNVTTAWKAQNPVLREVVDILTEQLLDIQLENYIPKEPL 60 70 80 90 100 110 130 140 150 160 170 180 pF1KE1 TLQVRMSCECEADGYIRGSWQFSFDGRKFLLFDSNNRKWTVVHAGARRMKEKWEKDSGLT :::.::::: .:.:. ::::.::::. ::::::.:: ::.:: :::.::::::.:. .: XP_011 TLQARMSCEQKAEGHGSGSWQLSFDGQIFLLFDSENRMWTTVHPGARKMKEKWENDKDMT 120 130 140 150 160 170 190 200 210 220 230 pF1KE1 TFFKMVSMRDCKSWLRDFLMHRKKRLEPTA--PPTMAPGLAQPKAIATTLSPWSFLIILC :...:: :: .::.:::: . :::.: ::::. : :::.: :::: :.:.: XP_011 MSFHYISMGDCTGWLEDFLMGMDSTLEPSAGAPPTMSSGTAQPRATATTLI-LCCLLIMC 180 190 200 210 220 230 240 pF1KE1 FILPGI ... XP_011 LLICSRHSLTQSHGHHPQSLQPPPHPPLLHPTWLLRRVLWSDRKNQAMQRQELKGHGEK 240 250 260 270 280 290 >>NP_001001788 (OMIM: 609244) retinoic acid early transc (334 aa) initn: 708 init1: 708 opt: 848 Z-score: 1061.1 bits: 204.2 E(85289): 2.3e-52 Smith-Waterman score: 848; 54.7% identity (74.5% similar) in 243 aa overlap (1-241:1-241) 10 20 30 40 50 60 pF1KE1 MAAAASPAILPRLAILPYLLFDWSGTGRADAHSLWYNFTIIHLPRHGQQWCEVQSQVDQK ::::::::.: :: .: :: .: :: :: ::: :..:.: : : .:: ::.:::.: NP_001 MAAAASPAFLLRLPLL-LLLSSWCRTGLADPHSLCYDITVIPKFRPGPRWCAVQGQVDEK 10 20 30 40 50 70 80 90 100 110 120 pF1KE1 NFLSYDCGSDKVLSMGHLEEQLYATDAWGKQLEMLREVGQRLRLELADTELEDFTPSGPL .:: ::::: : .. : ..: .: :: : .:::: . : .: : .::.. :. :: NP_001 TFLHYDCGSKTVTPVSPLGKKLNVTTAWKAQNPVLREVVDILTEQLLDIQLENYIPKEPL 60 70 80 90 100 110 130 140 150 160 170 180 pF1KE1 TLQVRMSCECEADGYIRGSWQFSFDGRKFLLFDSNNRKWTVVHAGARRMKEKWEKDSGLT :::.::::: .:.:. ::::.::::. ::::::.:: ::.:: :::.::::::.:. .: NP_001 TLQARMSCEQKAEGHGSGSWQLSFDGQIFLLFDSENRMWTTVHPGARKMKEKWENDKDMT 120 130 140 150 160 170 190 200 210 220 230 pF1KE1 TFFKMVSMRDCKSWLRDFLMHRKKRLEPTA--PPTMAPGLAQPKAIATTLSPWSFLIILC :...:: :: .::.:::: . :::.: ::::. : :::.: :::: :.:.: NP_001 MSFHYISMGDCTGWLEDFLMGMDSTLEPSAGAPPTMSSGTAQPRATATTLI-LCCLLIMC 180 190 200 210 220 230 240 pF1KE1 FILPGI ... NP_001 LLICSRHSLTQSHGHHPQSLQPPPHPPLLHPTWLLRRVLWSDSYQIAKRPLSGGHVTRVT 240 250 260 270 280 290 >>XP_016866320 (OMIM: 609244) PREDICTED: retinoic acid e (338 aa) initn: 708 init1: 708 opt: 848 Z-score: 1061.0 bits: 204.2 E(85289): 2.3e-52 Smith-Waterman score: 848; 54.7% identity (74.5% similar) in 243 aa overlap (1-241:1-241) 10 20 30 40 50 60 pF1KE1 MAAAASPAILPRLAILPYLLFDWSGTGRADAHSLWYNFTIIHLPRHGQQWCEVQSQVDQK ::::::::.: :: .: :: .: :: :: ::: :..:.: : : .:: ::.:::.: XP_016 MAAAASPAFLLRLPLL-LLLSSWCRTGLADPHSLCYDITVIPKFRPGPRWCAVQGQVDEK 10 20 30 40 50 70 80 90 100 110 120 pF1KE1 NFLSYDCGSDKVLSMGHLEEQLYATDAWGKQLEMLREVGQRLRLELADTELEDFTPSGPL .:: ::::: : .. : ..: .: :: : .:::: . : .: : .::.. :. :: XP_016 TFLHYDCGSKTVTPVSPLGKKLNVTTAWKAQNPVLREVVDILTEQLLDIQLENYIPKEPL 60 70 80 90 100 110 130 140 150 160 170 180 pF1KE1 TLQVRMSCECEADGYIRGSWQFSFDGRKFLLFDSNNRKWTVVHAGARRMKEKWEKDSGLT :::.::::: .:.:. ::::.::::. ::::::.:: ::.:: :::.::::::.:. .: XP_016 TLQARMSCEQKAEGHGSGSWQLSFDGQIFLLFDSENRMWTTVHPGARKMKEKWENDKDMT 120 130 140 150 160 170 190 200 210 220 230 pF1KE1 TFFKMVSMRDCKSWLRDFLMHRKKRLEPTA--PPTMAPGLAQPKAIATTLSPWSFLIILC :...:: :: .::.:::: . :::.: ::::. : :::.: :::: :.:.: XP_016 MSFHYISMGDCTGWLEDFLMGMDSTLEPSAGAPPTMSSGTAQPRATATTLI-LCCLLIMC 180 190 200 210 220 230 240 pF1KE1 FILPGI ... XP_016 LLICSRHSLTQSHGHHPQSLQPPPHPPLLHPTWLLRRVLWSDRYGGRIGSGAKGRWVRRE 240 250 260 270 280 290 >>XP_011533788 (OMIM: 611047) PREDICTED: retinoic acid e (246 aa) initn: 753 init1: 707 opt: 823 Z-score: 1031.6 bits: 198.3 E(85289): 1e-50 Smith-Waterman score: 823; 53.8% identity (74.1% similar) in 247 aa overlap (1-244:1-246) 10 20 30 40 50 60 pF1KE1 MAAAASPAILPRLAILPYLLFDWSGTGRADAHSLWYNFTIIHLPRHGQQWCEVQSQVDQK ::::: ::.: : .: .::: :: . : : ::: :..:.: : : .:: ::.:::.: XP_011 MAAAAIPALLLCLPLL-FLLFGWSRARRDDPHSLCYDITVIPKFRPGPRWCAVQGQVDEK 10 20 30 40 50 70 80 90 100 110 120 pF1KE1 NFLSYDCGSDKVLSMGHLEEQLYATDAWGKQLEMLREVGQRLRLELADTELEDFTPSGPL .:: ::::. : .. : ..: .: :: : .:::: . : .: : .::..::. :: XP_011 TFLHYDCGNKTVTPVSPLGKKLNVTMAWKAQNPVLREVVDILTEQLLDIQLENYTPKEPL 60 70 80 90 100 110 130 140 150 160 170 180 pF1KE1 TLQVRMSCECEADGYIRGSWQFSFDGRKFLLFDSNNRKWTVVHAGARRMKEKWEKDSGLT :::.::::: .:.:. ::::::.::. ::::::..: ::.:: :::.::::::.:. .. XP_011 TLQARMSCEQKAEGHSSGSWQFSIDGQTFLLFDSEKRMWTTVHPGARKMKEKWENDKDVA 120 130 140 150 160 170 190 200 210 220 230 pF1KE1 TFFKMVSMRDCKSWLRDFLMHRKKRLEPTA--PPTMAPGLAQPKAIATTLSPWSFLIIL- :...:: :: .::.:::: . :::.: : .:. : .: .: :::: .:::: XP_011 MSFHYISMGDCIGWLEDFLMGMDSTLEPSAGAPLAMSSGTTQLRATATTLILCCLLIILP 180 190 200 210 220 230 240 pF1KE1 CFILPGI ::::::: XP_011 CFILPGI 240 >>NP_570970 (OMIM: 611047) retinoic acid early transcrip (246 aa) initn: 753 init1: 707 opt: 823 Z-score: 1031.6 bits: 198.3 E(85289): 1e-50 Smith-Waterman score: 823; 53.8% identity (74.1% similar) in 247 aa overlap (1-244:1-246) 10 20 30 40 50 60 pF1KE1 MAAAASPAILPRLAILPYLLFDWSGTGRADAHSLWYNFTIIHLPRHGQQWCEVQSQVDQK ::::: ::.: : .: .::: :: . : : ::: :..:.: : : .:: ::.:::.: NP_570 MAAAAIPALLLCLPLL-FLLFGWSRARRDDPHSLCYDITVIPKFRPGPRWCAVQGQVDEK 10 20 30 40 50 70 80 90 100 110 120 pF1KE1 NFLSYDCGSDKVLSMGHLEEQLYATDAWGKQLEMLREVGQRLRLELADTELEDFTPSGPL .:: ::::. : .. : ..: .: :: : .:::: . : .: : .::..::. :: NP_570 TFLHYDCGNKTVTPVSPLGKKLNVTMAWKAQNPVLREVVDILTEQLLDIQLENYTPKEPL 60 70 80 90 100 110 130 140 150 160 170 180 pF1KE1 TLQVRMSCECEADGYIRGSWQFSFDGRKFLLFDSNNRKWTVVHAGARRMKEKWEKDSGLT :::.::::: .:.:. ::::::.::. ::::::..: ::.:: :::.::::::.:. .. NP_570 TLQARMSCEQKAEGHSSGSWQFSIDGQTFLLFDSEKRMWTTVHPGARKMKEKWENDKDVA 120 130 140 150 160 170 190 200 210 220 230 pF1KE1 TFFKMVSMRDCKSWLRDFLMHRKKRLEPTA--PPTMAPGLAQPKAIATTLSPWSFLIIL- :...:: :: .::.:::: . :::.: : .:. : .: .: :::: .:::: NP_570 MSFHYISMGDCIGWLEDFLMGMDSTLEPSAGAPLAMSSGTTQLRATATTLILCCLLIILP 180 190 200 210 220 230 240 pF1KE1 CFILPGI ::::::: NP_570 CFILPGI 240 >>NP_079493 (OMIM: 605698) NKG2D ligand 2 preproprotein (246 aa) initn: 754 init1: 708 opt: 816 Z-score: 1022.8 bits: 196.7 E(85289): 3.1e-50 Smith-Waterman score: 816; 54.3% identity (73.3% similar) in 247 aa overlap (1-244:1-246) 10 20 30 40 50 60 pF1KE1 MAAAASPAILPRLAILPYLLFDWSGTGRADAHSLWYNFTIIHLPRHGQQWCEVQSQVDQK :::::. :: : .: :: :: .:::: ::: :..:.: : : .:: ::.:::.: NP_079 MAAAAATKILLCLPLL-LLLSGWSRAGRADPHSLCYDITVIPKFRPGPRWCAVQGQVDEK 10 20 30 40 50 70 80 90 100 110 120 pF1KE1 NFLSYDCGSDKVLSMGHLEEQLYATDAWGKQLEMLREVGQRLRLELADTELEDFTPSGPL .:: ::::. : .. : ..: .: :: : .:::: . : .: : .::..::. :: NP_079 TFLHYDCGNKTVTPVSPLGKKLNVTTAWKAQNPVLREVVDILTEQLRDIQLENYTPKEPL 60 70 80 90 100 110 130 140 150 160 170 180 pF1KE1 TLQVRMSCECEADGYIRGSWQFSFDGRKFLLFDSNNRKWTVVHAGARRMKEKWEKDSGLT :::.::::: .:.:. :::::::::. ::::::..: ::.:: :::.::::::.:. .. NP_079 TLQARMSCEQKAEGHSSGSWQFSFDGQIFLLFDSEKRMWTTVHPGARKMKEKWENDKVVA 120 130 140 150 160 170 190 200 210 220 230 pF1KE1 TFFKMVSMRDCKSWLRDFLMHRKKRLEPTA--PPTMAPGLAQPKAIATTLSPWSFLIIL- :.. :: :: .::.:::: . :::.: : .:. : .: .: :::: .:::: NP_079 MSFHYFSMGDCIGWLEDFLMGMDSTLEPSAGAPLAMSSGTTQLRATATTLILCCLLIILP 180 190 200 210 220 230 240 pF1KE1 CFILPGI ::::::: NP_079 CFILPGI 240 >>XP_016866810 (OMIM: 605698) PREDICTED: NKG2D ligand 2 (211 aa) initn: 742 init1: 704 opt: 730 Z-score: 916.2 bits: 176.8 E(85289): 2.7e-44 Smith-Waterman score: 730; 54.3% identity (74.3% similar) in 210 aa overlap (1-210:1-209) 10 20 30 40 50 60 pF1KE1 MAAAASPAILPRLAILPYLLFDWSGTGRADAHSLWYNFTIIHLPRHGQQWCEVQSQVDQK :::::. :: : .: :: :: .:::: ::: :..:.: : : .:: ::.:::.: XP_016 MAAAAATKILLCLPLL-LLLSGWSRAGRADPHSLCYDITVIPKFRPGPRWCAVQGQVDEK 10 20 30 40 50 70 80 90 100 110 120 pF1KE1 NFLSYDCGSDKVLSMGHLEEQLYATDAWGKQLEMLREVGQRLRLELADTELEDFTPSGPL .:: ::::. : .. : ..: .: :: : .:::: . : .: : .::..::. :: XP_016 TFLHYDCGNKTVTPVSPLGKKLNVTTAWKAQNPVLREVVDILTEQLRDIQLENYTPKEPL 60 70 80 90 100 110 130 140 150 160 170 180 pF1KE1 TLQVRMSCECEADGYIRGSWQFSFDGRKFLLFDSNNRKWTVVHAGARRMKEKWEKDSGLT :::.::::: .:.:. :::::::::. ::::::..: ::.:: :::.::::::.:. .. XP_016 TLQARMSCEQKAEGHSSGSWQFSFDGQIFLLFDSEKRMWTTVHPGARKMKEKWENDKVVA 120 130 140 150 160 170 190 200 210 220 230 240 pF1KE1 TFFKMVSMRDCKSWLRDFLMHRKKRLEPTAPPTMAPGLAQPKAIATTLSPWSFLIILCFI :.. :: :: .::.:::: . :::.: XP_016 MSFHYFSMGDCIGWLEDFLMGMDSTLEPSAGG 180 190 200 210 >>XP_016866811 (OMIM: 605697) PREDICTED: NKG2D ligand 1 (211 aa) initn: 757 init1: 681 opt: 723 Z-score: 907.4 bits: 175.1 E(85289): 8.4e-44 Smith-Waterman score: 723; 51.4% identity (74.8% similar) in 210 aa overlap (1-210:1-209) 10 20 30 40 50 60 pF1KE1 MAAAASPAILPRLAILPYLLFDWSGTGRADAHSLWYNFTIIHLPRHGQQWCEVQSQVDQK ::::::::.: : .: .:: :: .: .:.: : :.: : : ::::::. ::.. XP_016 MAAAASPAFLLCLPLL-HLLSGWSRAGWVDTHCLCYDFIITPKSRPEPQWCEVQGLVDER 10 20 30 40 50 70 80 90 100 110 120 pF1KE1 NFLSYDCGSDKVLSMGHLEEQLYATDAWGKQLEMLREVGQRLRLELADTELEDFTPSGPL :: ::: . :. ... : ... .: .: .: : ::.: . :. .: : ..:.. : :: XP_016 PFLHYDCVNHKAKAFASLGKKVNVTKTWEEQTETLRDVVDFLKGQLLDIQVENLIPIEPL 60 70 80 90 100 110 130 140 150 160 170 180 pF1KE1 TLQVRMSCECEADGYIRGSWQFSFDGRKFLLFDSNNRKWTVVHAGARRMKEKWEKDSGLT :::.::::: :: :. :::::: :.:.:::::::::::::..: ::..: :::::. .: XP_016 TLQARMSCEHEAHGHGRGSWQFLFNGQKFLLFDSNNRKWTALHPGAKKMTEKWEKNRDVT 120 130 140 150 160 170 190 200 210 220 230 240 pF1KE1 TFFKMVSMRDCKSWLRDFLMHRKKRLEPTAPPTMAPGLAQPKAIATTLSPWSFLIILCFI ::. .:. ::: ::..:::. .. :.::. XP_016 MFFQKISLGDCKMWLEEFLMYWEQMLDPTSGK 180 190 200 210 244 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 16:29:16 2016 done: Sun Nov 6 16:29:17 2016 Total Scan time: 6.270 Total Display time: 0.000 Function used was FASTA [36.3.4 Apr, 2011]