FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE3058, 213 aa 1>>>pF1KE3058 213 - 213 aa - 213 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.6506+/-0.000766; mu= 12.5882+/- 0.047 mean_var=67.7703+/-13.536, 0's: 0 Z-trim(108.5): 10 B-trim: 227 in 1/49 Lambda= 0.155795 statistics sampled from 10230 (10233) to 10230 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.683), E-opt: 0.2 (0.314), width: 16 Scan time: 2.180 The best scores are: opt bits E(32554) CCDS5087.1 GTF3C6 gene_id:112495|Hs108|chr6 ( 213) 1408 324.8 2.5e-89 >>CCDS5087.1 GTF3C6 gene_id:112495|Hs108|chr6 (213 aa) initn: 1408 init1: 1408 opt: 1408 Z-score: 1717.3 bits: 324.8 E(32554): 2.5e-89 Smith-Waterman score: 1408; 100.0% identity (100.0% similar) in 213 aa overlap (1-213:1-213) 10 20 30 40 50 60 pF1KE3 MAAAADERSPEDGEDEEEEEQLVLVELSGIIDSDFLSKCENKCKVLGIDTERPILQVDSC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS50 MAAAADERSPEDGEDEEEEEQLVLVELSGIIDSDFLSKCENKCKVLGIDTERPILQVDSC 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 VFAGEYEDTLGTCVIFEENVEHADTEGNNKTVLKYKCHTMKKLSMTRTLLTEKKEGEENI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS50 VFAGEYEDTLGTCVIFEENVEHADTEGNNKTVLKYKCHTMKKLSMTRTLLTEKKEGEENI 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 GGVEWLQIKDNDFSYRPNMICNFLHENEDEEVVASAPDKSLELEEEEIQMNDSSNLSCEQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS50 GGVEWLQIKDNDFSYRPNMICNFLHENEDEEVVASAPDKSLELEEEEIQMNDSSNLSCEQ 130 140 150 160 170 180 190 200 210 pF1KE3 EKPMHLEIEDSGPLIDIPSETEGSVFMETQMLP ::::::::::::::::::::::::::::::::: CCDS50 EKPMHLEIEDSGPLIDIPSETEGSVFMETQMLP 190 200 210 213 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 06:04:22 2016 done: Sun Nov 6 06:04:23 2016 Total Scan time: 2.180 Total Display time: -0.010 Function used was FASTA [36.3.4 Apr, 2011]