(Linear) (Six-base) MAPSORT of: KIEE9415.seq Check: 388 from: 1 to: 1086 KIEE9415.orf With 182 enzymes: SgfI * December 27, 2011 16:39 .. AccI GT'mk_AC Cuts at: 0 926 1086 Size: 926 160 AhdI GACnn_n'nnGTC Cuts at: 0 419 1086 Size: 419 667 AlfI GCAnnnnnnTGCnnnnnnnnnn_nn' Cuts at: 0 670 739 1086 Size: 670 69 347 Fragments arranged by size: 670 347 69 ApaLI G'TGCA_C Cuts at: 0 553 1086 Size: 553 533 AvrII C'CTAG_G Cuts at: 0 588 1086 Size: 588 498 BanI G'GyrC_C Cuts at: 0 402 758 798 865 1086 Size: 402 356 40 67 221 Fragments arranged by size: 402 356 221 67 40 BbeI G_GCGC'C Cuts at: 0 762 802 869 1086 Size: 762 40 67 217 Fragments arranged by size: 762 217 67 40 BbsI GAAGACnn'nnnn_ Cuts at: 0 702 1086 Size: 702 384 BclI T'GATC_A Cuts at: 0 968 1086 Size: 968 118 Bme1580I G_kGCm'C Cuts at: 0 407 557 859 1058 1086 Size: 407 150 302 199 28 Fragments arranged by size: 407 302 199 150 28 BmgBI CAC'GTC Cuts at: 0 228 1086 Size: 228 858 BplI GAGnnnnnCTCnnnnnnnn_nnnnn' Cuts at: 0 186 1086 Size: 186 900 BpmI CTGGAGnnnnnnnnnnnnnn_nn' Cuts at: 0 181 281 1086 Size: 181 100 805 Fragments arranged by size: 805 181 100 BsaI GGTCTCn'nnnn_ Cuts at: 0 161 1076 1086 Size: 161 915 10 Fragments arranged by size: 915 161 10 BsaAI yAC'GTr Cuts at: 0 678 735 1086 Size: 678 57 351 Fragments arranged by size: 678 351 57 BsaHI Gr'CG_yC Cuts at: 0 759 799 866 1086 Size: 759 40 67 220 Fragments arranged by size: 759 220 67 40 BsaXI ACnnnnnCTCCnnnnnnn_nnn' Cuts at: 0 182 212 1086 Size: 182 30 874 Fragments arranged by size: 874 182 30 BseYI C'CCAG_C Cuts at: 0 184 612 852 1075 1086 Size: 184 428 240 223 11 Fragments arranged by size: 428 240 223 184 11 BsgI GTGCAGnnnnnnnnnnnnnn_nn' Cuts at: 0 709 1086 Size: 709 377 BsiEI CG_ry'CG Cuts at: 0 53 1086 Size: 53 1033 BsiHKAI G_wGCw'C Cuts at: 0 233 557 1086 Size: 233 324 529 Fragments arranged by size: 529 324 233 Bsp1286I G_dGCh'C Cuts at: 0 233 407 557 859 1058 1086 Size: 233 174 150 302 199 28 Fragments arranged by size: 302 233 199 174 150 28 BsrBI CCG'CTC Cuts at: 0 61 1086 Size: 61 1025 BsrFI r'CCGG_y Cuts at: 0 136 1086 Size: 136 950 BssHII G'CGCG_C Cuts at: 0 636 667 1011 1086 Size: 636 31 344 75 Fragments arranged by size: 636 344 75 31 BssSI C'ACGA_G Cuts at: 0 442 1086 Size: 442 644 BstAPI GCAn_nnn'nTGC Cuts at: 0 561 1086 Size: 561 525 BstXI CCAn_nnnn'nTGG Cuts at: 0 489 1086 Size: 489 597 BstYI r'GATC_y Cuts at: 0 1004 1086 Size: 1004 82 BtgI C'CryG_G Cuts at: 0 220 1086 Size: 220 866 BtgZI GCGATGnnnnnnnnnn'nnnn_ Cuts at: 0 273 1086 Size: 273 813 BtsI GCAGTG_nn' Cuts at: 0 789 1086 Size: 789 297 DraIII CAC_nnn'GTG Cuts at: 0 387 1086 Size: 387 699 DrdI GACnn_nn'nnGTC Cuts at: 0 922 1086 Size: 922 164 EaeI y'GGCC_r Cuts at: 0 50 71 341 479 1086 Size: 50 21 270 138 607 Fragments arranged by size: 607 270 138 50 21 EagI C'GGCC_G Cuts at: 0 50 1086 Size: 50 1036 EciI GGCGGAnnnnnnnnn_nn' Cuts at: 0 158 681 1086 Size: 158 523 405 Fragments arranged by size: 523 405 158 Eco57MI CTGrAGnnnnnnnnnnnnnn_nn' Cuts at: 0 181 281 1086 Size: 181 100 805 Fragments arranged by size: 805 181 100 EcoO109I rG'GnC_Cy Cuts at: 0 109 915 1086 Size: 109 806 171 Fragments arranged by size: 806 171 109 FspI TGC'GCA Cuts at: 0 310 739 1086 Size: 310 429 347 Fragments arranged by size: 429 347 310 FspAI rTGC'GCAy Cuts at: 0 739 1086 Size: 739 347 HaeII r_GCGC'y Cuts at: 0 14 286 307 762 802 869 1086 Size: 14 272 21 455 40 67 217 Fragments arranged by size: 455 272 217 67 40 21 14 Hin4I GAynnnnnvTCnnnnnnnn_nnnnn' Cuts at: 0 405 437 1086 Size: 405 32 649 Fragments arranged by size: 649 405 32 KasI G'GCGC_C Cuts at: 0 758 798 865 1086 Size: 758 40 67 221 Fragments arranged by size: 758 221 67 40 MscI TGG'CCA Cuts at: 0 343 481 1086 Size: 343 138 605 Fragments arranged by size: 605 343 138 MslI CAynn'nnrTG Cuts at: 0 316 322 487 1086 Size: 316 6 165 599 Fragments arranged by size: 599 316 165 6 MspA1I CmG'CkG Cuts at: 0 177 211 349 663 872 1086 Size: 177 34 138 314 209 214 Fragments arranged by size: 314 214 209 177 138 34 NaeI GCC'GGC Cuts at: 0 138 1086 Size: 138 948 NarI GG'CG_CC Cuts at: 0 759 799 866 1086 Size: 759 40 67 220 Fragments arranged by size: 759 220 67 40 NgoMIV G'CCGG_C Cuts at: 0 136 1086 Size: 136 950 PflMI CCAn_nnn'nTGG Cuts at: 0 39 399 1086 Size: 39 360 687 Fragments arranged by size: 687 360 39 PmlI CAC'GTG Cuts at: 0 678 1086 Size: 678 408 PpuMI rG'GwC_Cy Cuts at: 0 109 915 1086 Size: 109 806 171 Fragments arranged by size: 806 171 109 PstI C_TGCA'G Cuts at: 0 649 785 1086 Size: 649 136 301 Fragments arranged by size: 649 301 136 PvuII CAG'CTG Cuts at: 0 177 872 1086 Size: 177 695 214 Fragments arranged by size: 695 214 177 SanDI GG'GwC_CC Cuts at: 0 109 1086 Size: 109 977 ScaI AGT'ACT Cuts at: 0 397 1086 Size: 397 689 SfcI C'TryA_G Cuts at: 0 645 781 1086 Size: 645 136 305 Fragments arranged by size: 645 305 136 SfoI GGC'GCC Cuts at: 0 760 800 867 1086 Size: 760 40 67 219 Fragments arranged by size: 760 219 67 40 StuI AGG'CCT Cuts at: 0 593 1086 Size: 593 493 StyI C'CwwG_G Cuts at: 0 588 1086 Size: 588 498 TatI w'GTAC_w Cuts at: 0 395 1086 Size: 395 691 TstI CACnnnnnnTCCnnnnnnn_nnnnn' Cuts at: 0 182 214 1086 Size: 182 32 872 Fragments arranged by size: 872 182 32 Tth111I GACn'n_nGTC Cuts at: 0 582 1086 Size: 582 504 XcmI CCAnnnn_n'nnnnTGG Cuts at: 0 324 828 894 1086 Size: 324 504 66 192 Fragments arranged by size: 504 324 192 66 Enzymes that do cut: AccI AhdI AlfI ApaLI AvrII BanI BbeI BbsI BclI Bme1580I BmgBI BplI BpmI BsaI BsaAI BsaHI BsaXI BseYI BsgI BsiEI BsiHKAI Bsp1286I BsrBI BsrFI BssHII BssSI BstAPI BstXI BstYI BtgI BtgZI BtsI DraIII DrdI EaeI EagI EciI Eco57MI EcoO109I FspI FspAI HaeII Hin4I KasI MscI MslI MspA1I NaeI NarI NgoMIV PflMI PmlI PpuMI PstI PvuII SanDI ScaI SfcI SfoI StuI StyI TatI TstI Tth111I XcmI Enzymes that do not cut: AarI AatII Acc65I AclI AcuI AfeI AflII AflIII AgeI AleI AloI AlwNI ApaI ApoI AscI AseI AsiSI AvaI BaeI BamHI BanII BbvCI BcgI BciVI BfrBI BglI BglII BlpI BmrI BmtI Bpu10I BpuEI BsaBI BsaWI BseRI BsiWI BsmI BsmBI BspEI BspHI BspMI BsrDI BsrGI BstBI BstEII BstZ17I Bsu36I ClaI CspCI DraI EarI EcoICRI EcoNI EcoRI EcoRV FalI FseI HincII HindIII HpaI KpnI MfeI MluI MmeI NcoI NdeI NheI NotI NruI NsiI NspI PacI PasI PciI PfoI PmeI PpiI PshAI PsiI PspOMI PspXI PsrI PvuI RsrII SacI SacII SalI SapI SbfI SexAI SfiI SgfI SgrAI SmaI SmlI SnaBI SpeI SphI SrfI SspI SwaI TaqII XbaI XhoI XmaI XmnI ZraI