FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE4060, 334 aa 1>>>pF1KE4060 334 - 334 aa - 334 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 6.0717+/-0.000712; mu= 12.7027+/- 0.043 mean_var=84.8976+/-17.126, 0's: 0 Z-trim(111.2): 11 B-trim: 0 in 0/52 Lambda= 0.139196 statistics sampled from 12183 (12189) to 12183 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.738), E-opt: 0.2 (0.374), width: 16 Scan time: 2.970 The best scores are: opt bits E(32554) CCDS5062.1 OSTM1 gene_id:28962|Hs108|chr6 ( 334) 2239 459.0 2.4e-129 >>CCDS5062.1 OSTM1 gene_id:28962|Hs108|chr6 (334 aa) initn: 2239 init1: 2239 opt: 2239 Z-score: 2435.6 bits: 459.0 E(32554): 2.4e-129 Smith-Waterman score: 2239; 100.0% identity (100.0% similar) in 334 aa overlap (1-334:1-334) 10 20 30 40 50 60 pF1KE4 MEPGPTAAQRRCSLPPWLPLGLLLWSGLALGALPFGSSPHRVFHDLLSEQQLLEVEDLSL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS50 MEPGPTAAQRRCSLPPWLPLGLLLWSGLALGALPFGSSPHRVFHDLLSEQQLLEVEDLSL 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE4 SLLQGGGLGPLSLPPDLPDLDPECRELLLDFANSSAELTGCLVRSARPVRLCQTCYPLFQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS50 SLLQGGGLGPLSLPPDLPDLDPECRELLLDFANSSAELTGCLVRSARPVRLCQTCYPLFQ 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE4 QVVSKMDNISRAAGNTSESQSCARSLLMADRMQIVVILSEFFNTTWQEANCANCLTNNSE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS50 QVVSKMDNISRAAGNTSESQSCARSLLMADRMQIVVILSEFFNTTWQEANCANCLTNNSE 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE4 ELSNSTVYFLNLFNHTLTCFEHNLQGNAHSLLQTKNYSEVCKNCREAYKTLSSLYSEMQK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS50 ELSNSTVYFLNLFNHTLTCFEHNLQGNAHSLLQTKNYSEVCKNCREAYKTLSSLYSEMQK 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE4 MNELENKAEPGTHLCIDVEDAMNITRKLWSRTFNCSVPCSDTVPVIAVSVFILFLPVVFY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS50 MNELENKAEPGTHLCIDVEDAMNITRKLWSRTFNCSVPCSDTVPVIAVSVFILFLPVVFY 250 260 270 280 290 300 310 320 330 pF1KE4 LSSFLHSEQKKRKLILPKRLKSSTSFANIQENSN :::::::::::::::::::::::::::::::::: CCDS50 LSSFLHSEQKKRKLILPKRLKSSTSFANIQENSN 310 320 330 334 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 04:15:33 2016 done: Sun Nov 6 04:15:34 2016 Total Scan time: 2.970 Total Display time: -0.030 Function used was FASTA [36.3.4 Apr, 2011]