FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE1850, 369 aa 1>>>pF1KE1850 369 - 369 aa - 369 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.3657+/-0.000876; mu= 16.0978+/- 0.053 mean_var=67.5607+/-13.686, 0's: 0 Z-trim(106.5): 27 B-trim: 4 in 1/49 Lambda= 0.156037 statistics sampled from 8985 (9003) to 8985 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.657), E-opt: 0.2 (0.277), width: 16 Scan time: 2.320 The best scores are: opt bits E(32554) CCDS5042.1 COQ3 gene_id:51805|Hs108|chr6 ( 369) 2470 565.0 3.6e-161 >>CCDS5042.1 COQ3 gene_id:51805|Hs108|chr6 (369 aa) initn: 2470 init1: 2470 opt: 2470 Z-score: 3006.9 bits: 565.0 E(32554): 3.6e-161 Smith-Waterman score: 2470; 99.5% identity (100.0% similar) in 369 aa overlap (1-369:1-369) 10 20 30 40 50 60 pF1KE1 MWSGRKLGSSGGWFLRVLGPGGCNTKAARPLISSAVYVKNQLSGTLQIKPGVFNEYRTIW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS50 MWSGRKLGSSGGWFLRVLGPGGCNTKAARPLISSAVYVKNQLSGTLQIKPGVFNEYRTIW 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 FKSYRTIFSCLNRIKSFRYPWARLYSTSQTTVDSGEVKTFLALAHKWWDEQGVYAPLHSM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS50 FKSYRTIFSCLNRIKSFRYPWARLYSTSQTTVDSGEVKTFLALAHKWWDEQGVYAPLHSM 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 NDLRVPFIRDNLLKTIPNHQPGKPLLGMKILDVGCGGGLLTEPLGRLGASVIGIDPVDEN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS50 NDLRVPFIRDNLLKTIPNHQPGKPLLGMKILDVGCGGGLLTEPLGRLGASVIGIDPVDEN 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 IKTAQCHKSFDPVLDKRIEYRVCSLEEIVEETAETFDAVVASEVVEHVIDLETFLQCCCQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS50 IKTAQCHKSFDPVLDKRIEYRVCSLEEIVEETAETFDAVVASEVVEHVIDLETFLQCCCQ 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE1 VLKPGGSLFITTINKTQLSYALGIVFSEQIAGIVPKGTHTWEKFVSPETLESILESNGLS :::::::::::::::::::::::::::::::.:::::::::::::::::::::::::::: CCDS50 VLKPGGSLFITTINKTQLSYALGIVFSEQIASIVPKGTHTWEKFVSPETLESILESNGLS 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE1 VQTVVGMLYNPFSGYWHWSENTSLNYAAHAVKSRVQEHPASAEFVLKGETEELQANACTN ::::::::::::::::::::::::::::.::::::::::::::::::::::::::::::: CCDS50 VQTVVGMLYNPFSGYWHWSENTSLNYAAYAVKSRVQEHPASAEFVLKGETEELQANACTN 310 320 330 340 350 360 pF1KE1 PAVHEKLKK ::::::::: CCDS50 PAVHEKLKK 369 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 16:42:30 2016 done: Sun Nov 6 16:42:30 2016 Total Scan time: 2.320 Total Display time: -0.030 Function used was FASTA [36.3.4 Apr, 2011]