FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE6395, 413 aa 1>>>pF1KE6395 413 - 413 aa - 413 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 6.1902+/-0.00096; mu= 13.4032+/- 0.057 mean_var=106.1823+/-22.047, 0's: 0 Z-trim(106.8): 35 B-trim: 393 in 1/50 Lambda= 0.124465 statistics sampled from 9175 (9186) to 9175 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.647), E-opt: 0.2 (0.282), width: 16 Scan time: 2.550 The best scores are: opt bits E(32554) CCDS4999.1 PRSS35 gene_id:167681|Hs108|chr6 ( 413) 2813 516.1 2.5e-146 CCDS8278.1 PRSS23 gene_id:11098|Hs108|chr11 ( 383) 805 155.5 8.2e-38 >>CCDS4999.1 PRSS35 gene_id:167681|Hs108|chr6 (413 aa) initn: 2813 init1: 2813 opt: 2813 Z-score: 2740.6 bits: 516.1 E(32554): 2.5e-146 Smith-Waterman score: 2813; 99.8% identity (100.0% similar) in 413 aa overlap (1-413:1-413) 10 20 30 40 50 60 pF1KE6 MENMLLWLIFFTPGWTLIDGSEMEWDFMWHLRKVPRIVSERTFHLTSPAFEADAKMMVNT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS49 MENMLLWLIFFTPGWTLIDGSEMEWDFMWHLRKVPRIVSERTFHLTSPAFEADAKMMVNT 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 VCGIECQKELPTPSLSELEDYLSYETVFENGTRTLTRVKVQDLVLEPTQNITTKGVSVRR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS49 VCGIECQKELPTPSLSELEDYLSYETVFENGTRTLTRVKVQDLVLEPTQNITTKGVSVRR 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE6 KRQVYGTDSRFSILDKRFLTNFPFSTAVKLSTGCSGILISPQHVLTAAHCVHDGKDYVKG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS49 KRQVYGTDSRFSILDKRFLTNFPFSTAVKLSTGCSGILISPQHVLTAAHCVHDGKDYVKG 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE6 SKKLRVGLLKMRNKSGGKKRRGSKRSRREASGGDQREGTREHLQERAKGGRRRKKSGRGQ :::::::::::::::::::::::::::::::::::::::::::.:::::::::::::::: CCDS49 SKKLRVGLLKMRNKSGGKKRRGSKRSRREASGGDQREGTREHLRERAKGGRRRKKSGRGQ 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE6 RIAEGRPSFQWTRVKNTHIPKGWARGGMGDATLDYDYALLELKRAHKKKYMELGISPTIK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS49 RIAEGRPSFQWTRVKNTHIPKGWARGGMGDATLDYDYALLELKRAHKKKYMELGISPTIK 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE6 KMPGGMIHFSGFDNDRADQLVYRFCSVSDESNDLLYQYCDAESGSTGSGVYLRLKDPDKK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS49 KMPGGMIHFSGFDNDRADQLVYRFCSVSDESNDLLYQYCDAESGSTGSGVYLRLKDPDKK 310 320 330 340 350 360 370 380 390 400 410 pF1KE6 NWKRKIIAVYSGHQWVDVHGVQKDYNVAVRITPLKYAQICLWIHGNDANCAYG ::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS49 NWKRKIIAVYSGHQWVDVHGVQKDYNVAVRITPLKYAQICLWIHGNDANCAYG 370 380 390 400 410 >>CCDS8278.1 PRSS23 gene_id:11098|Hs108|chr11 (383 aa) initn: 1368 init1: 789 opt: 805 Z-score: 792.3 bits: 155.5 E(32554): 8.2e-38 Smith-Waterman score: 1332; 48.8% identity (69.8% similar) in 414 aa overlap (5-413:7-383) 10 20 30 40 50 pF1KE6 MENMLLWLIFFTP-GWTLIDGSEMEWDFMWHLRKVPRIVSERTFHLTSPAFEADAKMM ::.:.:: . .. : : ..: .. . :..:..: : :.::. CCDS82 MAGIPGLLFLLFFLLCAVGQVSPYSAPWKPTWPAYRLPVVLPQSTLNLAKPDFGAEAKLE 10 20 30 40 50 60 60 70 80 90 100 110 pF1KE6 VNTVCGIECQKELPTPSLSELEDYLSYETVFENGTRTLTRVKVQDLVLEPT----QNITT :.. :: .:.: : :. : ..::::::.. ::.:: :.: . : .. . CCDS82 VSSSCGPQCHKGTPLPTYEEAKQYLSYETLYANGSRTETQVGIYILSSSGDGAQHRDSGS 70 80 90 100 110 120 120 130 140 150 160 170 pF1KE6 KGVSVRRKRQVYGTDSRFSILDKRFLTNFPFSTAVKLSTGCSGILISPQHVLTAAHCVHD .: : :::::.:: ::::::. : :: :.::::.:::::::.: :.. .::::::::.:: CCDS82 SGKS-RRKRQIYGYDSRFSIFGKDFLLNYPFSTSVKLSTGCTGTLVAEKHVLTAAHCIHD 130 140 150 160 170 180 190 200 210 220 230 pF1KE6 GKDYVKGSKKLRVGLLKMRNKSGGKKRRGSKRSRREASGGDQREGTREHLQERAKGGRRR :: ::::..:::::.:: . :.:: ::.. : . :. : CCDS82 GKTYVKGTQKLRVGFLKPKFKDGG---RGANDSTSA-------------MPEQMK----- 180 190 200 210 240 250 260 270 280 290 pF1KE6 KKSGRGQRIAEGRPSFQWTRVKNTHIPKGWARGGMGDATLDYDYALLELKRAHKKKYMEL ::: ::: ::.:::: .:. .: .::::::::::. ::.:.:.. CCDS82 ---------------FQWIRVKRTHVPKGWIKGNANDIGMDYDYALLELKKPHKRKFMKI 220 230 240 250 260 300 310 320 330 340 350 pF1KE6 GISPTIKKMPGGMIHFSGFDNDRADQLVYRFCSVSDESNDLLYQYCDAESGSTGSGVYLR :.:: :..::: :::::.:::: .::::::.:.::. ::::: :::. :..:::::.: CCDS82 GVSPPAKQLPGGRIHFSGYDNDRPGNLVYRFCDVKDETYDLLYQQCDAQPGASGSGVYVR 270 280 290 300 310 320 360 370 380 390 400 410 pF1KE6 LKDPDKKNWKRKIIAVYSGHQWVDVHGVQKDYNVAVRITPLKYAQICLWIHGNDANCAYG . ....:.::::...:::::::..: .:.::::::::::::::: ::.:: .: : CCDS82 MWKRQQQKWERKIIGIFSGHQWVDMNGSPQDFNVAVRITPLKYAQICYWIKGNYLDCREG 330 340 350 360 370 380 413 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 12:53:45 2016 done: Tue Nov 8 12:53:45 2016 Total Scan time: 2.550 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]