FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE1647, 163 aa 1>>>pF1KE1647 163 - 163 aa - 163 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.2973+/-0.000289; mu= 12.3214+/- 0.018 mean_var=64.4879+/-12.741, 0's: 0 Z-trim(118.2): 16 B-trim: 816 in 1/54 Lambda= 0.159711 statistics sampled from 30955 (30971) to 30955 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.745), E-opt: 0.2 (0.363), width: 16 Scan time: 4.870 The best scores are: opt bits E(85289) XP_011512578 (OMIM: 606496,613956) PREDICTED: inte ( 163) 1102 261.9 3.4e-70 NP_443104 (OMIM: 606496,613956) interleukin-17F pr ( 163) 1102 261.9 3.4e-70 NP_002181 (OMIM: 603149) interleukin-17A precursor ( 155) 431 107.2 1.1e-23 NP_612141 (OMIM: 607587) interleukin-17D precursor ( 202) 216 57.8 1.2e-08 XP_005266478 (OMIM: 607587) PREDICTED: interleukin ( 209) 216 57.8 1.2e-08 XP_016864836 (OMIM: 604627) PREDICTED: interleukin ( 128) 199 53.7 1.2e-07 XP_011535924 (OMIM: 604627) PREDICTED: interleukin ( 128) 199 53.7 1.2e-07 NP_001304916 (OMIM: 604627) interleukin-17B isofor ( 128) 199 53.7 1.2e-07 XP_016864837 (OMIM: 604627) PREDICTED: interleukin ( 128) 199 53.7 1.2e-07 NP_055258 (OMIM: 604627) interleukin-17B isoform 1 ( 180) 199 53.8 1.6e-07 XP_016864835 (OMIM: 604627) PREDICTED: interleukin ( 245) 199 53.9 2.1e-07 NP_037410 (OMIM: 604628) interleukin-17C precursor ( 197) 183 50.1 2.2e-06 XP_005266479 (OMIM: 607587) PREDICTED: interleukin ( 114) 168 46.6 1.5e-05 NP_758525 (OMIM: 605658) interleukin-25 isoform 2 ( 161) 159 44.6 8.6e-05 NP_073626 (OMIM: 605658) interleukin-25 isoform 1 ( 177) 159 44.6 9.3e-05 >>XP_011512578 (OMIM: 606496,613956) PREDICTED: interleu (163 aa) initn: 1102 init1: 1102 opt: 1102 Z-score: 1381.2 bits: 261.9 E(85289): 3.4e-70 Smith-Waterman score: 1102; 100.0% identity (100.0% similar) in 163 aa overlap (1-163:1-163) 10 20 30 40 50 60 pF1KE1 MTVKTLHGPAMVKYLLLSILGLAFLSEAAARKIPKVGHTFFQKPESCPPVPGGSMKLDIG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 MTVKTLHGPAMVKYLLLSILGLAFLSEAAARKIPKVGHTFFQKPESCPPVPGGSMKLDIG 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 IINENQRVSMSRNIESRSTSPWNYTVTWDPNRYPSEVVQAQCRNLGCINAQGKEDISMNS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 IINENQRVSMSRNIESRSTSPWNYTVTWDPNRYPSEVVQAQCRNLGCINAQGKEDISMNS 70 80 90 100 110 120 130 140 150 160 pF1KE1 VPIQQETLVVRRKHQGCSVSFQLEKVLVTVGCTCVTPVIHHVQ ::::::::::::::::::::::::::::::::::::::::::: XP_011 VPIQQETLVVRRKHQGCSVSFQLEKVLVTVGCTCVTPVIHHVQ 130 140 150 160 >>NP_443104 (OMIM: 606496,613956) interleukin-17F precur (163 aa) initn: 1102 init1: 1102 opt: 1102 Z-score: 1381.2 bits: 261.9 E(85289): 3.4e-70 Smith-Waterman score: 1102; 100.0% identity (100.0% similar) in 163 aa overlap (1-163:1-163) 10 20 30 40 50 60 pF1KE1 MTVKTLHGPAMVKYLLLSILGLAFLSEAAARKIPKVGHTFFQKPESCPPVPGGSMKLDIG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_443 MTVKTLHGPAMVKYLLLSILGLAFLSEAAARKIPKVGHTFFQKPESCPPVPGGSMKLDIG 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 IINENQRVSMSRNIESRSTSPWNYTVTWDPNRYPSEVVQAQCRNLGCINAQGKEDISMNS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_443 IINENQRVSMSRNIESRSTSPWNYTVTWDPNRYPSEVVQAQCRNLGCINAQGKEDISMNS 70 80 90 100 110 120 130 140 150 160 pF1KE1 VPIQQETLVVRRKHQGCSVSFQLEKVLVTVGCTCVTPVIHHVQ ::::::::::::::::::::::::::::::::::::::::::: NP_443 VPIQQETLVVRRKHQGCSVSFQLEKVLVTVGCTCVTPVIHHVQ 130 140 150 160 >>NP_002181 (OMIM: 603149) interleukin-17A precursor [Ho (155 aa) initn: 411 init1: 411 opt: 431 Z-score: 546.0 bits: 107.2 E(85289): 1.1e-23 Smith-Waterman score: 431; 49.0% identity (68.2% similar) in 151 aa overlap (18-162:7-154) 10 20 30 40 50 pF1KE1 MTVKTLHGPAMVKYLLLSILGLAFLSEAAARKIPKVGHTFFQKPESCPP-----VPGGSM :...: .: : : :.: :. ..: .:: : : NP_002 MTPGKTSLVSLLLLLSLEA--IVKAGITIPRNP-GCPNSEDKNFPRTVM 10 20 30 40 60 70 80 90 100 110 pF1KE1 -KLDIGIINENQRVSMSRNIESRSTSPWNYTVTWDPNRYPSEVVQAQCRNLGCINAQGKE .:.: : : . : . .::::::: . ::.:::: . .:.::.::::::.:. NP_002 VNLNIHNRNTNTNPKRSSDYYNRSTSPWNLHRNEDPERYPSVIWEAKCRHLGCINADGNV 50 60 70 80 90 100 120 130 140 150 160 pF1KE1 DISMNSVPIQQETLVVRRKHQGCSVSFQLEKVLVTVGCTCVTPVIHHVQ : ::::::::: ::.::. : ::.:::.::.::::::::..::: NP_002 DYHMNSVPIQQEILVLRREPPHCPNSFRLEKILVSVGCTCVTPIVHHVA 110 120 130 140 150 >>NP_612141 (OMIM: 607587) interleukin-17D precursor [Ho (202 aa) initn: 237 init1: 127 opt: 216 Z-score: 276.5 bits: 57.8 E(85289): 1.2e-08 Smith-Waterman score: 216; 39.0% identity (62.2% similar) in 82 aa overlap (77-155:89-170) 50 60 70 80 90 100 pF1KE1 CPPVPGGSMKLDIGIINENQRVSMSRNIESRSTSPWNYTVTWDPNRYPSEVVQAQCRNLG ::.::: : ...:: ::: . .: : : NP_612 QLGPREQARNASCPAGGRPADRRFRPPTNLRSVSPWAYRISYDPARYPRYLPEAYCLCRG 60 70 80 90 100 110 110 120 130 140 150 160 pF1KE1 CINAQ-GKEDISMNSVPIQQETLVVRRKHQ--GCSVSFQLEKVLVTVGCTCVTPVIHHVQ :... :.::. . :.:. . :.:.:: : . : . :::::: NP_612 CLTGLFGEEDVRFRSAPVYMPTVVLRRTPACAGGRSVYTEAYVTIPVGCTCVPEPEKDAD 120 130 140 150 160 170 NP_612 SINSSIDKQGAKLLLGPNDAPAGP 180 190 200 >>XP_005266478 (OMIM: 607587) PREDICTED: interleukin-17D (209 aa) initn: 237 init1: 127 opt: 216 Z-score: 276.3 bits: 57.8 E(85289): 1.2e-08 Smith-Waterman score: 216; 39.0% identity (62.2% similar) in 82 aa overlap (77-155:96-177) 50 60 70 80 90 100 pF1KE1 CPPVPGGSMKLDIGIINENQRVSMSRNIESRSTSPWNYTVTWDPNRYPSEVVQAQCRNLG ::.::: : ...:: ::: . .: : : XP_005 QLGPREQARNASCPAGGRPADRRFRPPTNLRSVSPWAYRISYDPARYPRYLPEAYCLCRG 70 80 90 100 110 120 110 120 130 140 150 160 pF1KE1 CINAQ-GKEDISMNSVPIQQETLVVRRKHQ--GCSVSFQLEKVLVTVGCTCVTPVIHHVQ :... :.::. . :.:. . :.:.:: : . : . :::::: XP_005 CLTGLFGEEDVRFRSAPVYMPTVVLRRTPACAGGRSVYTEAYVTIPVGCTCVPEPEKDAD 130 140 150 160 170 180 XP_005 SINSSIDKQGAKLLLGPNDAPAGP 190 200 >>XP_016864836 (OMIM: 604627) PREDICTED: interleukin-17B (128 aa) initn: 225 init1: 138 opt: 199 Z-score: 258.4 bits: 53.7 E(85289): 1.2e-07 Smith-Waterman score: 199; 38.4% identity (61.6% similar) in 86 aa overlap (77-155:44-127) 50 60 70 80 90 100 pF1KE1 CPPVPGGSMKLDIGIINENQRVSMSRNIESRSTSPWNYTVTWDPNRYPSEVVQAQCRNLG :: :::.:... ::.: : .. .:.: :: XP_016 IEEMVAQLRNSSELAQRKCEVNLQLWMSNKRSLSPWGYSINHDPSRIPVDLPEARCLCLG 20 30 40 50 60 70 110 120 130 140 150 pF1KE1 CINA-QGKEDISMNSVPIQQETLVVRR------KHQGCSVSFQLEKVLVTVGCTCVTPVI :.: .:: :: :::. ... : :: . : .: ..:::::. XP_016 CVNPFTMQEDRSMVSVPVFSQVPVRRRLCPPPPRTGPCRQRAVMET--IAVGCTCIF 80 90 100 110 120 160 pF1KE1 HHVQ >>XP_011535924 (OMIM: 604627) PREDICTED: interleukin-17B (128 aa) initn: 225 init1: 138 opt: 199 Z-score: 258.4 bits: 53.7 E(85289): 1.2e-07 Smith-Waterman score: 199; 38.4% identity (61.6% similar) in 86 aa overlap (77-155:44-127) 50 60 70 80 90 100 pF1KE1 CPPVPGGSMKLDIGIINENQRVSMSRNIESRSTSPWNYTVTWDPNRYPSEVVQAQCRNLG :: :::.:... ::.: : .. .:.: :: XP_011 IEEMVAQLRNSSELAQRKCEVNLQLWMSNKRSLSPWGYSINHDPSRIPVDLPEARCLCLG 20 30 40 50 60 70 110 120 130 140 150 pF1KE1 CINA-QGKEDISMNSVPIQQETLVVRR------KHQGCSVSFQLEKVLVTVGCTCVTPVI :.: .:: :: :::. ... : :: . : .: ..:::::. XP_011 CVNPFTMQEDRSMVSVPVFSQVPVRRRLCPPPPRTGPCRQRAVMET--IAVGCTCIF 80 90 100 110 120 160 pF1KE1 HHVQ >>NP_001304916 (OMIM: 604627) interleukin-17B isoform 2 (128 aa) initn: 225 init1: 138 opt: 199 Z-score: 258.4 bits: 53.7 E(85289): 1.2e-07 Smith-Waterman score: 199; 38.4% identity (61.6% similar) in 86 aa overlap (77-155:44-127) 50 60 70 80 90 100 pF1KE1 CPPVPGGSMKLDIGIINENQRVSMSRNIESRSTSPWNYTVTWDPNRYPSEVVQAQCRNLG :: :::.:... ::.: : .. .:.: :: NP_001 IEEMVAQLRNSSELAQRKCEVNLQLWMSNKRSLSPWGYSINHDPSRIPVDLPEARCLCLG 20 30 40 50 60 70 110 120 130 140 150 pF1KE1 CINA-QGKEDISMNSVPIQQETLVVRR------KHQGCSVSFQLEKVLVTVGCTCVTPVI :.: .:: :: :::. ... : :: . : .: ..:::::. NP_001 CVNPFTMQEDRSMVSVPVFSQVPVRRRLCPPPPRTGPCRQRAVMET--IAVGCTCIF 80 90 100 110 120 160 pF1KE1 HHVQ >>XP_016864837 (OMIM: 604627) PREDICTED: interleukin-17B (128 aa) initn: 225 init1: 138 opt: 199 Z-score: 258.4 bits: 53.7 E(85289): 1.2e-07 Smith-Waterman score: 199; 38.4% identity (61.6% similar) in 86 aa overlap (77-155:44-127) 50 60 70 80 90 100 pF1KE1 CPPVPGGSMKLDIGIINENQRVSMSRNIESRSTSPWNYTVTWDPNRYPSEVVQAQCRNLG :: :::.:... ::.: : .. .:.: :: XP_016 IEEMVAQLRNSSELAQRKCEVNLQLWMSNKRSLSPWGYSINHDPSRIPVDLPEARCLCLG 20 30 40 50 60 70 110 120 130 140 150 pF1KE1 CINA-QGKEDISMNSVPIQQETLVVRR------KHQGCSVSFQLEKVLVTVGCTCVTPVI :.: .:: :: :::. ... : :: . : .: ..:::::. XP_016 CVNPFTMQEDRSMVSVPVFSQVPVRRRLCPPPPRTGPCRQRAVMET--IAVGCTCIF 80 90 100 110 120 160 pF1KE1 HHVQ >>NP_055258 (OMIM: 604627) interleukin-17B isoform 1 pre (180 aa) initn: 213 init1: 138 opt: 199 Z-score: 256.1 bits: 53.8 E(85289): 1.6e-07 Smith-Waterman score: 199; 38.4% identity (61.6% similar) in 86 aa overlap (77-155:96-179) 50 60 70 80 90 100 pF1KE1 CPPVPGGSMKLDIGIINENQRVSMSRNIESRSTSPWNYTVTWDPNRYPSEVVQAQCRNLG :: :::.:... ::.: : .. .:.: :: NP_055 IEEMVAQLRNSSELAQRKCEVNLQLWMSNKRSLSPWGYSINHDPSRIPVDLPEARCLCLG 70 80 90 100 110 120 110 120 130 140 150 pF1KE1 CINA-QGKEDISMNSVPIQQETLVVRR------KHQGCSVSFQLEKVLVTVGCTCVTPVI :.: .:: :: :::. ... : :: . : .: ..:::::. NP_055 CVNPFTMQEDRSMVSVPVFSQVPVRRRLCPPPPRTGPCRQRAVMET--IAVGCTCIF 130 140 150 160 170 180 160 pF1KE1 HHVQ 163 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 16:47:59 2016 done: Sun Nov 6 16:48:00 2016 Total Scan time: 4.870 Total Display time: -0.030 Function used was FASTA [36.3.4 Apr, 2011]