FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE5446, 322 aa 1>>>pF1KE5446 322 - 322 aa - 322 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 6.6413+/-0.000342; mu= 10.0222+/- 0.021 mean_var=118.4808+/-25.192, 0's: 0 Z-trim(118.0): 54 B-trim: 1423 in 2/47 Lambda= 0.117828 statistics sampled from 30371 (30437) to 30371 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.725), E-opt: 0.2 (0.357), width: 16 Scan time: 7.460 The best scores are: opt bits E(85289) NP_001128577 (OMIM: 607369) potassium channel subf ( 322) 2256 394.3 1.8e-109 XP_016866835 (OMIM: 607369) PREDICTED: potassium c ( 262) 1499 265.5 8.5e-71 NP_001128579 (OMIM: 607369) potassium channel subf ( 262) 1499 265.5 8.5e-71 NP_001128578 (OMIM: 607369) potassium channel subf ( 294) 1499 265.5 9.3e-71 NP_115491 (OMIM: 607369) potassium channel subfami ( 309) 1499 265.6 9.7e-71 XP_011513237 (OMIM: 607369) PREDICTED: potassium c ( 197) 1047 188.6 9.2e-48 NP_113648 (OMIM: 607370) potassium channel subfami ( 332) 641 119.7 8.3e-27 NP_001128583 (OMIM: 607370) potassium channel subf ( 271) 632 118.1 2e-26 NP_066984 (OMIM: 605873) potassium channel subfami ( 538) 600 112.9 1.5e-24 NP_612191 (OMIM: 605873) potassium channel subfami ( 543) 600 112.9 1.5e-24 NP_612190 (OMIM: 605873) potassium channel subfami ( 543) 600 112.9 1.5e-24 XP_011507825 (OMIM: 603219) PREDICTED: potassium c ( 370) 590 111.1 3.7e-24 XP_011507826 (OMIM: 603219) PREDICTED: potassium c ( 370) 590 111.1 3.7e-24 XP_011507824 (OMIM: 603219) PREDICTED: potassium c ( 370) 590 111.1 3.7e-24 NP_055032 (OMIM: 603219) potassium channel subfami ( 411) 590 111.1 4e-24 XP_016856738 (OMIM: 603219) PREDICTED: potassium c ( 412) 590 111.1 4e-24 NP_001017424 (OMIM: 603219) potassium channel subf ( 422) 590 111.1 4.1e-24 XP_016856737 (OMIM: 603219) PREDICTED: potassium c ( 422) 590 111.1 4.1e-24 NP_001017425 (OMIM: 603219) potassium channel subf ( 426) 590 111.1 4.1e-24 XP_005249513 (OMIM: 603493) PREDICTED: potassium c ( 496) 553 104.9 3.6e-22 NP_201567 (OMIM: 605720) potassium channel subfami ( 393) 546 103.6 6.9e-22 NP_001304019 (OMIM: 605720) potassium channel subf ( 393) 546 103.6 6.9e-22 NP_003731 (OMIM: 603493) potassium channel subfami ( 499) 545 103.5 9.3e-22 NP_002236 (OMIM: 601745) potassium channel subfami ( 336) 488 93.7 5.6e-19 XP_011535142 (OMIM: 605873) PREDICTED: potassium c ( 410) 481 92.6 1.5e-18 NP_004814 (OMIM: 603939) potassium channel subfami ( 313) 452 87.6 3.7e-17 NP_258416 (OMIM: 603940) potassium channel subfami ( 252) 364 72.6 1e-12 NP_203134 (OMIM: 603940) potassium channel subfami ( 252) 364 72.6 1e-12 NP_005705 (OMIM: 603940) potassium channel subfami ( 257) 364 72.6 1e-12 NP_203133 (OMIM: 603940) potassium channel subfami ( 307) 364 72.6 1.2e-12 NP_002237 (OMIM: 603220,615344) potassium channel ( 394) 362 72.4 1.8e-12 XP_011515404 (OMIM: 605874,612292) PREDICTED: pota ( 374) 353 70.8 5e-12 NP_001269463 (OMIM: 605874,612292) potassium chann ( 374) 353 70.8 5e-12 XP_011515403 (OMIM: 605874,612292) PREDICTED: pota ( 401) 353 70.8 5.2e-12 NP_071753 (OMIM: 607368) potassium channel subfami ( 330) 343 69.1 1.5e-11 XP_011542486 (OMIM: 601745) PREDICTED: potassium c ( 268) 263 55.4 1.5e-07 NP_071337 (OMIM: 607367) potassium channel subfami ( 408) 246 52.7 1.6e-06 NP_071338 (OMIM: 607366) potassium channel subfami ( 430) 245 52.5 1.9e-06 NP_862823 (OMIM: 613655,613656) potassium channel ( 384) 225 49.1 1.8e-05 XP_005264350 (OMIM: 603220,615344) PREDICTED: pota ( 284) 200 44.7 0.00027 XP_016869019 (OMIM: 605874,612292) PREDICTED: pota ( 264) 195 43.8 0.00046 XP_016869020 (OMIM: 605874,612292) PREDICTED: pota ( 264) 195 43.8 0.00046 XP_011515405 (OMIM: 605874,612292) PREDICTED: pota ( 291) 195 43.9 0.0005 XP_011525829 (OMIM: 603939) PREDICTED: potassium c ( 176) 191 43.0 0.00054 XP_016882995 (OMIM: 603939) PREDICTED: potassium c ( 185) 191 43.1 0.00056 XP_011525828 (OMIM: 603939) PREDICTED: potassium c ( 179) 188 42.5 0.00077 >>NP_001128577 (OMIM: 607369) potassium channel subfamil (322 aa) initn: 2256 init1: 2256 opt: 2256 Z-score: 2086.2 bits: 394.3 E(85289): 1.8e-109 Smith-Waterman score: 2256; 100.0% identity (100.0% similar) in 322 aa overlap (1-322:1-322) 10 20 30 40 50 60 pF1KE5 MPSAGLCSCWGGRVLPLLLAYVCYLLLGATIFQLLERQAEAQSRDQFQLEKLRFLENYTC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MPSAGLCSCWGGRVLPLLLAYVCYLLLGATIFQLLERQAEAQSRDQFQLEKLRFLENYTC 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 LDQWAMEQFVQVIMEAWVKGVNPKGNSTNPSNWDFGSSFFFAGTVVTTIGYGNLAPSTEA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 LDQWAMEQFVQVIMEAWVKGVNPKGNSTNPSNWDFGSSFFFAGTVVTTIGYGNLAPSTEA 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE5 GQVFCVFYALLGIPLNVIFLNHLGTGLRAHLAAIERWEDRPRRSQVLQVLGLALFLTLGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 GQVFCVFYALLGIPLNVIFLNHLGTGLRAHLAAIERWEDRPRRSQVLQVLGLALFLTLGT 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE5 LVILIFPPMVFSHVEGWSFSEGFYFAFITLSTIGFGDYVVGHPLNFITPSGLLPSQEPFQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 LVILIFPPMVFSHVEGWSFSEGFYFAFITLSTIGFGDYVVGHPLNFITPSGLLPSQEPFQ 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE5 TPHGKPESQQIPGSFQKVSSMNVWPLSGMHSPGLAFPLPDCNIPDQERFRPLHPGAWKFW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 TPHGKPESQQIPGSFQKVSSMNVWPLSGMHSPGLAFPLPDCNIPDQERFRPLHPGAWKFW 250 260 270 280 290 300 310 320 pF1KE5 PLPLPSSNSKWAPMWLGSSAQV :::::::::::::::::::::: NP_001 PLPLPSSNSKWAPMWLGSSAQV 310 320 >>XP_016866835 (OMIM: 607369) PREDICTED: potassium chann (262 aa) initn: 1499 init1: 1499 opt: 1499 Z-score: 1392.0 bits: 265.5 E(85289): 8.5e-71 Smith-Waterman score: 1499; 100.0% identity (100.0% similar) in 221 aa overlap (1-221:1-221) 10 20 30 40 50 60 pF1KE5 MPSAGLCSCWGGRVLPLLLAYVCYLLLGATIFQLLERQAEAQSRDQFQLEKLRFLENYTC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 MPSAGLCSCWGGRVLPLLLAYVCYLLLGATIFQLLERQAEAQSRDQFQLEKLRFLENYTC 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 LDQWAMEQFVQVIMEAWVKGVNPKGNSTNPSNWDFGSSFFFAGTVVTTIGYGNLAPSTEA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 LDQWAMEQFVQVIMEAWVKGVNPKGNSTNPSNWDFGSSFFFAGTVVTTIGYGNLAPSTEA 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE5 GQVFCVFYALLGIPLNVIFLNHLGTGLRAHLAAIERWEDRPRRSQVLQVLGLALFLTLGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 GQVFCVFYALLGIPLNVIFLNHLGTGLRAHLAAIERWEDRPRRSQVLQVLGLALFLTLGT 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE5 LVILIFPPMVFSHVEGWSFSEGFYFAFITLSTIGFGDYVVGHPLNFITPSGLLPSQEPFQ ::::::::::::::::::::::::::::::::::::::::: XP_016 LVILIFPPMVFSHVEGWSFSEGFYFAFITLSTIGFGDYVVGLRQGCGAKAAPGRRPRRGS 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE5 TPHGKPESQQIPGSFQKVSSMNVWPLSGMHSPGLAFPLPDCNIPDQERFRPLHPGAWKFW XP_016 TAARGVQVTPQDFPISKKGLGS 250 260 >>NP_001128579 (OMIM: 607369) potassium channel subfamil (262 aa) initn: 1499 init1: 1499 opt: 1499 Z-score: 1392.0 bits: 265.5 E(85289): 8.5e-71 Smith-Waterman score: 1499; 100.0% identity (100.0% similar) in 221 aa overlap (1-221:1-221) 10 20 30 40 50 60 pF1KE5 MPSAGLCSCWGGRVLPLLLAYVCYLLLGATIFQLLERQAEAQSRDQFQLEKLRFLENYTC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MPSAGLCSCWGGRVLPLLLAYVCYLLLGATIFQLLERQAEAQSRDQFQLEKLRFLENYTC 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 LDQWAMEQFVQVIMEAWVKGVNPKGNSTNPSNWDFGSSFFFAGTVVTTIGYGNLAPSTEA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 LDQWAMEQFVQVIMEAWVKGVNPKGNSTNPSNWDFGSSFFFAGTVVTTIGYGNLAPSTEA 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE5 GQVFCVFYALLGIPLNVIFLNHLGTGLRAHLAAIERWEDRPRRSQVLQVLGLALFLTLGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 GQVFCVFYALLGIPLNVIFLNHLGTGLRAHLAAIERWEDRPRRSQVLQVLGLALFLTLGT 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE5 LVILIFPPMVFSHVEGWSFSEGFYFAFITLSTIGFGDYVVGHPLNFITPSGLLPSQEPFQ ::::::::::::::::::::::::::::::::::::::::: NP_001 LVILIFPPMVFSHVEGWSFSEGFYFAFITLSTIGFGDYVVGLRQGCGAKAAPGRRPRRGS 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE5 TPHGKPESQQIPGSFQKVSSMNVWPLSGMHSPGLAFPLPDCNIPDQERFRPLHPGAWKFW NP_001 TAARGVQVTPQDFPISKKGLGS 250 260 >>NP_001128578 (OMIM: 607369) potassium channel subfamil (294 aa) initn: 1499 init1: 1499 opt: 1499 Z-score: 1391.3 bits: 265.5 E(85289): 9.3e-71 Smith-Waterman score: 1499; 100.0% identity (100.0% similar) in 221 aa overlap (1-221:1-221) 10 20 30 40 50 60 pF1KE5 MPSAGLCSCWGGRVLPLLLAYVCYLLLGATIFQLLERQAEAQSRDQFQLEKLRFLENYTC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MPSAGLCSCWGGRVLPLLLAYVCYLLLGATIFQLLERQAEAQSRDQFQLEKLRFLENYTC 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 LDQWAMEQFVQVIMEAWVKGVNPKGNSTNPSNWDFGSSFFFAGTVVTTIGYGNLAPSTEA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 LDQWAMEQFVQVIMEAWVKGVNPKGNSTNPSNWDFGSSFFFAGTVVTTIGYGNLAPSTEA 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE5 GQVFCVFYALLGIPLNVIFLNHLGTGLRAHLAAIERWEDRPRRSQVLQVLGLALFLTLGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 GQVFCVFYALLGIPLNVIFLNHLGTGLRAHLAAIERWEDRPRRSQVLQVLGLALFLTLGT 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE5 LVILIFPPMVFSHVEGWSFSEGFYFAFITLSTIGFGDYVVGHPLNFITPSGLLPSQEPFQ ::::::::::::::::::::::::::::::::::::::::: NP_001 LVILIFPPMVFSHVEGWSFSEGFYFAFITLSTIGFGDYVVGTDPSKHYISVYRSLAAIWI 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE5 TPHGKPESQQIPGSFQKVSSMNVWPLSGMHSPGLAFPLPDCNIPDQERFRPLHPGAWKFW NP_001 LLGLAWLALILPLGPLLLHRCCQLWLLSRGLGVKDGAASDPSGLPRPQKIPISA 250 260 270 280 290 >>NP_115491 (OMIM: 607369) potassium channel subfamily K (309 aa) initn: 1499 init1: 1499 opt: 1499 Z-score: 1391.0 bits: 265.6 E(85289): 9.7e-71 Smith-Waterman score: 1499; 100.0% identity (100.0% similar) in 221 aa overlap (1-221:1-221) 10 20 30 40 50 60 pF1KE5 MPSAGLCSCWGGRVLPLLLAYVCYLLLGATIFQLLERQAEAQSRDQFQLEKLRFLENYTC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_115 MPSAGLCSCWGGRVLPLLLAYVCYLLLGATIFQLLERQAEAQSRDQFQLEKLRFLENYTC 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 LDQWAMEQFVQVIMEAWVKGVNPKGNSTNPSNWDFGSSFFFAGTVVTTIGYGNLAPSTEA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_115 LDQWAMEQFVQVIMEAWVKGVNPKGNSTNPSNWDFGSSFFFAGTVVTTIGYGNLAPSTEA 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE5 GQVFCVFYALLGIPLNVIFLNHLGTGLRAHLAAIERWEDRPRRSQVLQVLGLALFLTLGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_115 GQVFCVFYALLGIPLNVIFLNHLGTGLRAHLAAIERWEDRPRRSQVLQVLGLALFLTLGT 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE5 LVILIFPPMVFSHVEGWSFSEGFYFAFITLSTIGFGDYVVGHPLNFITPSGLLPSQEPFQ ::::::::::::::::::::::::::::::::::::::::: NP_115 LVILIFPPMVFSHVEGWSFSEGFYFAFITLSTIGFGDYVVGTDPSKHYISVYRSLAAIWI 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE5 TPHGKPESQQIPGSFQKVSSMNVWPLSGMHSPGLAFPLPDCNIPDQERFRPLHPGAWKFW NP_115 LLGLAWLALILPLGPLLLHRCCQLWLLSLRQGCGAKAAPGRRPRRGSTAARGVQVTPQDF 250 260 270 280 290 300 >>XP_011513237 (OMIM: 607369) PREDICTED: potassium chann (197 aa) initn: 1064 init1: 1047 opt: 1047 Z-score: 978.5 bits: 188.6 E(85289): 9.2e-48 Smith-Waterman score: 1047; 100.0% identity (100.0% similar) in 156 aa overlap (66-221:1-156) 40 50 60 70 80 90 pF1KE5 ERQAEAQSRDQFQLEKLRFLENYTCLDQWAMEQFVQVIMEAWVKGVNPKGNSTNPSNWDF :::::::::::::::::::::::::::::: XP_011 MEQFVQVIMEAWVKGVNPKGNSTNPSNWDF 10 20 30 100 110 120 130 140 150 pF1KE5 GSSFFFAGTVVTTIGYGNLAPSTEAGQVFCVFYALLGIPLNVIFLNHLGTGLRAHLAAIE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 GSSFFFAGTVVTTIGYGNLAPSTEAGQVFCVFYALLGIPLNVIFLNHLGTGLRAHLAAIE 40 50 60 70 80 90 160 170 180 190 200 210 pF1KE5 RWEDRPRRSQVLQVLGLALFLTLGTLVILIFPPMVFSHVEGWSFSEGFYFAFITLSTIGF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 RWEDRPRRSQVLQVLGLALFLTLGTLVILIFPPMVFSHVEGWSFSEGFYFAFITLSTIGF 100 110 120 130 140 150 220 230 240 250 260 270 pF1KE5 GDYVVGHPLNFITPSGLLPSQEPFQTPHGKPESQQIPGSFQKVSSMNVWPLSGMHSPGLA :::::: XP_011 GDYVVGLRQGCGAKAAPGRRPRRGSTAARGVQVTPQDFPISKKGLGS 160 170 180 190 >>NP_113648 (OMIM: 607370) potassium channel subfamily K (332 aa) initn: 639 init1: 406 opt: 641 Z-score: 602.3 bits: 119.7 E(85289): 8.3e-27 Smith-Waterman score: 645; 37.4% identity (67.4% similar) in 313 aa overlap (2-309:10-302) 10 20 30 40 50 pF1KE5 MPSAGLCSCWGGRVLPLLLAYVCYLLLGATIFQLLERQAEAQSRDQFQLEKL : . . .: .. :::::. :: ::. .: :: .: .: .:: .: NP_113 MYRPRARAAPEGRVRGCAVPSTVLLLLAYLAYLALGTGVFWTLEGRAAQDSSRSFQRDKW 10 20 30 40 50 60 60 70 80 90 100 110 pF1KE5 RFLENYTCLDQWAMEQFVQVIMEAWVKGVNPKGNSTNPSNWDFGSSFFFAGTVVTTIGYG ..:.:.::::. :...... ...:. .:.. .:.:. . :.. .::::. ...:::::: NP_113 ELLQNFTCLDRPALDSLIRDVVQAYKNGASLLSNTTSMGRWELVGSFFFSVSTITTIGYG 70 80 90 100 110 120 120 130 140 150 160 pF1KE5 NLAPSTEAGQVFCVFYALLGIPLNVIFLNHLGTGLRA---HLAAIE--RWEDRPRRSQVL ::.:.: :...::.:.::.:::::.. ::.:: .. : :. :.: : ... : NP_113 NLSPNTMAARLFCIFFALVGIPLNLVVLNRLGHLMQQGVNHWASRLGGTWQD-PDKARWL 130 140 150 160 170 170 180 190 200 210 220 pF1KE5 QVLGLALFLTLGTLVILIFPPMVFSHVEGWSFSEGFYFAFITLSTIGFGDYVVGHPLNFI : . .:. : :..:..::..:::.::::..::::::::::::.::::::.: .: NP_113 A--GSGALLS-GLLLFLLLPPLLFSHMEGWSYTEGFYFAFITLSTVGFGDYVIG--MN-- 180 190 200 210 220 230 230 240 250 260 270 280 pF1KE5 TPSGLLPSQEPFQTPHGKPESQQIPGSFQKVSSMNVWPLSGMHSPGLAFPLPDCNIPDQE :::. . . . : : .. .. . :: ...:: . :. ..: NP_113 ------PSQR-YPLWYKNMVSLWILFGMAWLALIIKLILSQLETPGRVCSC--CHHSSKE 240 250 260 270 280 290 300 310 320 pF1KE5 RFRPLHPGAWKFWPLPLPSSNSKWAPMWLGSSAQV :. .:. : : :.: NP_113 DFKS---QSWRQGPDREPESHSPQQGCYPEGPMGIIQHLEPSAHAAGCGKDS 290 300 310 320 330 >>NP_001128583 (OMIM: 607370) potassium channel subfamil (271 aa) initn: 631 init1: 406 opt: 632 Z-score: 595.3 bits: 118.1 E(85289): 2e-26 Smith-Waterman score: 632; 43.8% identity (76.3% similar) in 224 aa overlap (2-220:10-229) 10 20 30 40 50 pF1KE5 MPSAGLCSCWGGRVLPLLLAYVCYLLLGATIFQLLERQAEAQSRDQFQLEKL : . . .: .. :::::. :: ::. .: :: .: .: .:: .: NP_001 MYRPRARAAPEGRVRGCAVPSTVLLLLAYLAYLALGTGVFWTLEGRAAQDSSRSFQRDKW 10 20 30 40 50 60 60 70 80 90 100 110 pF1KE5 RFLENYTCLDQWAMEQFVQVIMEAWVKGVNPKGNSTNPSNWDFGSSFFFAGTVVTTIGYG ..:.:.::::. :...... ...:. .:.. .:.:. . :.. .::::. ...:::::: NP_001 ELLQNFTCLDRPALDSLIRDVVQAYKNGASLLSNTTSMGRWELVGSFFFSVSTITTIGYG 70 80 90 100 110 120 120 130 140 150 160 pF1KE5 NLAPSTEAGQVFCVFYALLGIPLNVIFLNHLGTGLRA---HLAAIE--RWEDRPRRSQVL ::.:.: :...::.:.::.:::::.. ::.:: .. : :. :.: : ... : NP_001 NLSPNTMAARLFCIFFALVGIPLNLVVLNRLGHLMQQGVNHWASRLGGTWQD-PDKARWL 130 140 150 160 170 170 180 190 200 210 220 pF1KE5 QVLGLALFLTLGTLVILIFPPMVFSHVEGWSFSEGFYFAFITLSTIGFGDYVVGHPLNFI : . .:. : :..:..::..:::.::::..::::::::::::.::::::. NP_001 A--GSGALLS-GLLLFLLLPPLLFSHMEGWSYTEGFYFAFITLSTVGFGDYVIASCLISD 180 190 200 210 220 230 230 240 250 260 270 280 pF1KE5 TPSGLLPSQEPFQTPHGKPESQQIPGSFQKVSSMNVWPLSGMHSPGLAFPLPDCNIPDQE NP_001 TRKPNRDWQTLERTSKSSGGLLKYRFLAGHGGSHL 240 250 260 270 >>NP_066984 (OMIM: 605873) potassium channel subfamily K (538 aa) initn: 445 init1: 277 opt: 600 Z-score: 561.7 bits: 112.9 E(85289): 1.5e-24 Smith-Waterman score: 600; 41.1% identity (76.6% similar) in 214 aa overlap (14-221:72-285) 10 20 30 40 pF1KE5 MPSAGLCSCWGGRVLPLLLAYVCYLLLGATIFQLLERQAEAQS :. .... : ::. :. .:. ::. :... NP_066 RLSISSRATVVARMEGTSQGGLQTVMKWKTVVAIFVVVVVYLVTGGLVFRALEQPFESSQ 50 60 70 80 90 100 50 60 70 80 90 100 pF1KE5 RDQFQLEKLRFLENYTCLDQWAMEQFVQVIMEAWVKGVNPKGNSTN-PSNWDFGSSFFFA .. . ::: .::....:.. .: ..: ..: ::.: :::.: :.::.::.:::: NP_066 KNTIALEKAEFLRDHVCVSPQELETLIQHALDADNAGVSPIGNSSNNSSHWDLGSAFFFA 110 120 130 140 150 160 110 120 130 140 150 pF1KE5 GTVVTTIGYGNLAPSTEAGQVFCVFYALLGIPLNVIFL----NHLGTGLRAHLAAIERWE :::.:::::::.:::::.:..::..::..:::: ..: ..::: . .: .:. NP_066 GTVITTIGYGNIAPSTEGGKIFCILYAIFGIPLFGFLLAGIGDQLGTIFGKSIARVEKVF 170 180 190 200 210 220 160 170 180 190 200 210 pF1KE5 DRPRRSQV-LQVLGLALFLTLGTLVILIFPPMVFSHVEGWSFSEGFYFAFITLSTIGFGD . . ::. ..:.. ::. : .:.. .: ..:...:::. :..::. .::.:.:::: NP_066 RKKQVSQTKIRVISTILFILAGCIVFVTIPAVIFKYIEGWTALESIYFVVVTLTTVGFGD 230 240 250 260 270 280 220 230 240 250 260 270 pF1KE5 YVVGHPLNFITPSGLLPSQEPFQTPHGKPESQQIPGSFQKVSSMNVWPLSGMHSPGLAFP .:.: NP_066 FVAGGNAGINYREWYKPLVWFWILVGLAYFAAVLSMIGDWLRVLSKKTKEEVGEIKAHAA 290 300 310 320 330 340 >>NP_612191 (OMIM: 605873) potassium channel subfamily K (543 aa) initn: 445 init1: 277 opt: 600 Z-score: 561.6 bits: 112.9 E(85289): 1.5e-24 Smith-Waterman score: 600; 41.1% identity (76.6% similar) in 214 aa overlap (14-221:77-290) 10 20 30 40 pF1KE5 MPSAGLCSCWGGRVLPLLLAYVCYLLLGATIFQLLERQAEAQS :. .... : ::. :. .:. ::. :... NP_612 RLSISSRATVVARMEGTSQGGLQTVMKWKTVVAIFVVVVVYLVTGGLVFRALEQPFESSQ 50 60 70 80 90 100 50 60 70 80 90 100 pF1KE5 RDQFQLEKLRFLENYTCLDQWAMEQFVQVIMEAWVKGVNPKGNSTN-PSNWDFGSSFFFA .. . ::: .::....:.. .: ..: ..: ::.: :::.: :.::.::.:::: NP_612 KNTIALEKAEFLRDHVCVSPQELETLIQHALDADNAGVSPIGNSSNNSSHWDLGSAFFFA 110 120 130 140 150 160 110 120 130 140 150 pF1KE5 GTVVTTIGYGNLAPSTEAGQVFCVFYALLGIPLNVIFL----NHLGTGLRAHLAAIERWE :::.:::::::.:::::.:..::..::..:::: ..: ..::: . .: .:. NP_612 GTVITTIGYGNIAPSTEGGKIFCILYAIFGIPLFGFLLAGIGDQLGTIFGKSIARVEKVF 170 180 190 200 210 220 160 170 180 190 200 210 pF1KE5 DRPRRSQV-LQVLGLALFLTLGTLVILIFPPMVFSHVEGWSFSEGFYFAFITLSTIGFGD . . ::. ..:.. ::. : .:.. .: ..:...:::. :..::. .::.:.:::: NP_612 RKKQVSQTKIRVISTILFILAGCIVFVTIPAVIFKYIEGWTALESIYFVVVTLTTVGFGD 230 240 250 260 270 280 220 230 240 250 260 270 pF1KE5 YVVGHPLNFITPSGLLPSQEPFQTPHGKPESQQIPGSFQKVSSMNVWPLSGMHSPGLAFP .:.: NP_612 FVAGGNAGINYREWYKPLVWFWILVGLAYFAAVLSMIGDWLRVLSKKTKEEVGEIKAHAA 290 300 310 320 330 340 322 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 00:50:29 2016 done: Tue Nov 8 00:50:30 2016 Total Scan time: 7.460 Total Display time: 0.010 Function used was FASTA [36.3.4 Apr, 2011]