FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE3152, 364 aa 1>>>pF1KE3152 364 - 364 aa - 364 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 6.0634+/-0.000759; mu= 14.4481+/- 0.046 mean_var=102.2593+/-20.730, 0's: 0 Z-trim(111.5): 15 B-trim: 0 in 0/53 Lambda= 0.126830 statistics sampled from 12427 (12437) to 12427 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.736), E-opt: 0.2 (0.382), width: 16 Scan time: 2.650 The best scores are: opt bits E(32554) CCDS34417.1 STK19 gene_id:8859|Hs108|chr6 ( 364) 2485 464.7 5.4e-131 CCDS4733.1 STK19 gene_id:8859|Hs108|chr6 ( 368) 2467 461.5 5.3e-130 >>CCDS34417.1 STK19 gene_id:8859|Hs108|chr6 (364 aa) initn: 2485 init1: 2485 opt: 2485 Z-score: 2465.3 bits: 464.7 E(32554): 5.4e-131 Smith-Waterman score: 2485; 100.0% identity (100.0% similar) in 364 aa overlap (1-364:1-364) 10 20 30 40 50 60 pF1KE3 MQKWFSAFDDAIIQRQWRANPSRGGGGVSFTKEVDTNVATGAPPRRQRVPGRACPWREPI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 MQKWFSAFDDAIIQRQWRANPSRGGGGVSFTKEVDTNVATGAPPRRQRVPGRACPWREPI 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 RGRRGARPGGGDAGGTPGETVRHCSAPEDPIFRFSSLHSYPFPGTIKSRDMSWKRHHLIP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 RGRRGARPGGGDAGGTPGETVRHCSAPEDPIFRFSSLHSYPFPGTIKSRDMSWKRHHLIP 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 ETFGVKRRRKRGPVESDPLRGEPGSARAAVSELMQLFPRGLFEDALPPIVLRSQVYSLVP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 ETFGVKRRRKRGPVESDPLRGEPGSARAAVSELMQLFPRGLFEDALPPIVLRSQVYSLVP 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE3 DRTVADRQLKELQEQGEIRIVQLGFDLDAHGIIFTEDYRTRVLKACDGRPYAGAVQKFLA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 DRTVADRQLKELQEQGEIRIVQLGFDLDAHGIIFTEDYRTRVLKACDGRPYAGAVQKFLA 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE3 SVLPACGDLSFQQDQMTQTFGFRDSEITHLVNAGVLTVRDAGSWWLAVPGAGRFIKYFVK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 SVLPACGDLSFQQDQMTQTFGFRDSEITHLVNAGVLTVRDAGSWWLAVPGAGRFIKYFVK 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE3 GRQAVLSMVRKAKYRELLLSELLGRRAPVVVRLGLTYHVHDLIGAQLVDCISTTSGTLLR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 GRQAVLSMVRKAKYRELLLSELLGRRAPVVVRLGLTYHVHDLIGAQLVDCISTTSGTLLR 310 320 330 340 350 360 pF1KE3 LPET :::: CCDS34 LPET >>CCDS4733.1 STK19 gene_id:8859|Hs108|chr6 (368 aa) initn: 1549 init1: 1549 opt: 2467 Z-score: 2447.4 bits: 461.5 E(32554): 5.3e-130 Smith-Waterman score: 2467; 98.9% identity (98.9% similar) in 368 aa overlap (1-364:1-368) 10 20 30 40 50 60 pF1KE3 MQKWFSAFDDAIIQRQWRANPSRGGGGVSFTKEVDTNVATGAPPRRQRVPGRACPWREPI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 MQKWFSAFDDAIIQRQWRANPSRGGGGVSFTKEVDTNVATGAPPRRQRVPGRACPWREPI 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 RGRRGARPGGGDAGGTPGETVRHCSAPEDPIFRFSSLHSYPFPGTIKSRDMSWKRHHLIP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 RGRRGARPGGGDAGGTPGETVRHCSAPEDPIFRFSSLHSYPFPGTIKSRDMSWKRHHLIP 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 ETFGVKRRRKRGPVESDPLRGEPGSARAAVSELMQLFPRGLFEDALPPIVLRSQVYSLVP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 ETFGVKRRRKRGPVESDPLRGEPGSARAAVSELMQLFPRGLFEDALPPIVLRSQVYSLVP 130 140 150 160 170 180 190 200 210 220 230 pF1KE3 DRTVADRQLKELQEQGEIRIVQLGFDLDAHGIIFTEDYRTRV----LKACDGRPYAGAVQ :::::::::::::::::::::::::::::::::::::::::: :::::::::::::: CCDS47 DRTVADRQLKELQEQGEIRIVQLGFDLDAHGIIFTEDYRTRVCDCVLKACDGRPYAGAVQ 190 200 210 220 230 240 240 250 260 270 280 290 pF1KE3 KFLASVLPACGDLSFQQDQMTQTFGFRDSEITHLVNAGVLTVRDAGSWWLAVPGAGRFIK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 KFLASVLPACGDLSFQQDQMTQTFGFRDSEITHLVNAGVLTVRDAGSWWLAVPGAGRFIK 250 260 270 280 290 300 300 310 320 330 340 350 pF1KE3 YFVKGRQAVLSMVRKAKYRELLLSELLGRRAPVVVRLGLTYHVHDLIGAQLVDCISTTSG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 YFVKGRQAVLSMVRKAKYRELLLSELLGRRAPVVVRLGLTYHVHDLIGAQLVDCISTTSG 310 320 330 340 350 360 360 pF1KE3 TLLRLPET :::::::: CCDS47 TLLRLPET 364 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 16:51:26 2016 done: Sun Nov 6 16:51:26 2016 Total Scan time: 2.650 Total Display time: 0.010 Function used was FASTA [36.3.4 Apr, 2011]