FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE6553, 147 aa 1>>>pF1KE6553 147 - 147 aa - 147 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 4.4365+/-0.000278; mu= 17.6138+/- 0.018 mean_var=69.1991+/-13.233, 0's: 0 Z-trim(119.5): 55 B-trim: 105 in 1/53 Lambda= 0.154179 statistics sampled from 33635 (33698) to 33635 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.77), E-opt: 0.2 (0.395), width: 16 Scan time: 4.830 The best scores are: opt bits E(85289) NP_001614 (OMIM: 601833) allograft inflammatory fa ( 147) 955 220.2 9.8e-58 NP_001305899 (OMIM: 601833) allograft inflammatory ( 93) 599 140.8 4.9e-34 NP_116573 (OMIM: 601833) allograft inflammatory fa ( 93) 599 140.8 4.9e-34 XP_005248927 (OMIM: 601833) PREDICTED: allograft i ( 186) 433 104.1 1e-22 XP_016865821 (OMIM: 601833) PREDICTED: allograft i ( 132) 347 84.9 4.7e-17 XP_005246057 (OMIM: 616450) PREDICTED: EF-hand dom ( 195) 158 43.0 0.00028 NP_077305 (OMIM: 616450) EF-hand domain-containing ( 240) 156 42.7 0.00044 NP_001230181 (OMIM: 611617) EF-hand domain-contain ( 143) 152 41.5 0.00057 NP_001292553 (OMIM: 114182,616249) calmodulin isof ( 197) 152 41.7 0.0007 NP_079478 (OMIM: 611617) EF-hand domain-containing ( 239) 150 41.3 0.0011 NP_001316851 (OMIM: 114183) calmodulin isoform 1 [ ( 149) 146 40.2 0.0015 NP_001734 (OMIM: 114182,616249) calmodulin isoform ( 149) 146 40.2 0.0015 NP_005175 (OMIM: 114183) calmodulin isoform 1 [Hom ( 149) 146 40.2 0.0015 NP_008819 (OMIM: 114180,614916,616247) calmodulin ( 149) 146 40.2 0.0015 XP_006720321 (OMIM: 114180,614916,616247) PREDICTE ( 150) 146 40.2 0.0015 NP_004057 (OMIM: 603187) centrin-1 [Homo sapiens] ( 172) 146 40.3 0.0016 NP_004335 (OMIM: 300006) centrin-2 [Homo sapiens] ( 172) 137 38.3 0.0065 NP_005176 (OMIM: 114184) calmodulin-like protein 3 ( 149) 134 37.5 0.0093 >>NP_001614 (OMIM: 601833) allograft inflammatory factor (147 aa) initn: 955 init1: 955 opt: 955 Z-score: 1157.5 bits: 220.2 E(85289): 9.8e-58 Smith-Waterman score: 955; 100.0% identity (100.0% similar) in 147 aa overlap (1-147:1-147) 10 20 30 40 50 60 pF1KE6 MSQTRDLQGGKAFGLLKAQQEERLDEINKQFLDDPKYSSDEDLPSKLEGFKEKYMEFDLN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MSQTRDLQGGKAFGLLKAQQEERLDEINKQFLDDPKYSSDEDLPSKLEGFKEKYMEFDLN 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 GNGDIDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFSYPDFLRMMLGKRSAILKM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 GNGDIDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFSYPDFLRMMLGKRSAILKM 70 80 90 100 110 120 130 140 pF1KE6 ILMYEEKAREKEKPTGPPAKKAISELP ::::::::::::::::::::::::::: NP_001 ILMYEEKAREKEKPTGPPAKKAISELP 130 140 >>NP_001305899 (OMIM: 601833) allograft inflammatory fac (93 aa) initn: 599 init1: 599 opt: 599 Z-score: 732.0 bits: 140.8 E(85289): 4.9e-34 Smith-Waterman score: 599; 100.0% identity (100.0% similar) in 93 aa overlap (55-147:1-93) 30 40 50 60 70 80 pF1KE6 DEINKQFLDDPKYSSDEDLPSKLEGFKEKYMEFDLNGNGDIDIMSLKRMLEKLGVPKTHL :::::::::::::::::::::::::::::: NP_001 MEFDLNGNGDIDIMSLKRMLEKLGVPKTHL 10 20 30 90 100 110 120 130 140 pF1KE6 ELKKLIGEVSSGSGETFSYPDFLRMMLGKRSAILKMILMYEEKAREKEKPTGPPAKKAIS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 ELKKLIGEVSSGSGETFSYPDFLRMMLGKRSAILKMILMYEEKAREKEKPTGPPAKKAIS 40 50 60 70 80 90 pF1KE6 ELP ::: NP_001 ELP >>NP_116573 (OMIM: 601833) allograft inflammatory factor (93 aa) initn: 599 init1: 599 opt: 599 Z-score: 732.0 bits: 140.8 E(85289): 4.9e-34 Smith-Waterman score: 599; 100.0% identity (100.0% similar) in 93 aa overlap (55-147:1-93) 30 40 50 60 70 80 pF1KE6 DEINKQFLDDPKYSSDEDLPSKLEGFKEKYMEFDLNGNGDIDIMSLKRMLEKLGVPKTHL :::::::::::::::::::::::::::::: NP_116 MEFDLNGNGDIDIMSLKRMLEKLGVPKTHL 10 20 30 90 100 110 120 130 140 pF1KE6 ELKKLIGEVSSGSGETFSYPDFLRMMLGKRSAILKMILMYEEKAREKEKPTGPPAKKAIS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_116 ELKKLIGEVSSGSGETFSYPDFLRMMLGKRSAILKMILMYEEKAREKEKPTGPPAKKAIS 40 50 60 70 80 90 pF1KE6 ELP ::: NP_116 ELP >>XP_005248927 (OMIM: 601833) PREDICTED: allograft infla (186 aa) initn: 766 init1: 433 opt: 433 Z-score: 528.7 bits: 104.1 E(85289): 1e-22 Smith-Waterman score: 598; 63.1% identity (63.1% similar) in 179 aa overlap (1-113:1-179) 10 20 30 40 50 60 pF1KE6 MSQTRDLQGGKAFGLLKAQQEERLDEINKQFLDDPKYSSDEDLPSKLEGFKEKYMEFDLN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 MSQTRDLQGGKAFGLLKAQQEERLDEINKQFLDDPKYSSDEDLPSKLEGFKEKYMEFDLN 10 20 30 40 50 60 pF1KE6 GNGDI------------------------------------------------------- ::::: XP_005 GNGDIGEKRVICGGRVVCRPKKTEVSPTCSIPHDLGGGPPTTVGGRRMGMRKWERRERVS 70 80 90 100 110 120 70 80 90 100 110 pF1KE6 -----------DIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFSYPDFLRMMLGKR :::::::::::::::::::::::::::::::::::::::::::::::: XP_005 PPSPHPHPLPPDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFSYPDFLRMMLGKR 130 140 150 160 170 180 120 130 140 pF1KE6 SAILKMILMYEEKAREKEKPTGPPAKKAISELP XP_005 SAILKM >>XP_016865821 (OMIM: 601833) PREDICTED: allograft infla (132 aa) initn: 410 init1: 347 opt: 347 Z-score: 427.2 bits: 84.9 E(85289): 4.7e-17 Smith-Waterman score: 347; 100.0% identity (100.0% similar) in 55 aa overlap (66-120:78-132) 40 50 60 70 80 90 pF1KE6 KYSSDEDLPSKLEGFKEKYMEFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKKLIGEVSS :::::::::::::::::::::::::::::: XP_016 TVGGRRMGMRKWERRERVSPPSPHPHPLPPDIMSLKRMLEKLGVPKTHLELKKLIGEVSS 50 60 70 80 90 100 100 110 120 130 140 pF1KE6 GSGETFSYPDFLRMMLGKRSAILKMILMYEEKAREKEKPTGPPAKKAISELP ::::::::::::::::::::::::: XP_016 GSGETFSYPDFLRMMLGKRSAILKM 110 120 130 >>XP_005246057 (OMIM: 616450) PREDICTED: EF-hand domain- (195 aa) initn: 121 init1: 121 opt: 158 Z-score: 197.9 bits: 43.0 E(85289): 0.00028 Smith-Waterman score: 158; 29.7% identity (63.4% similar) in 101 aa overlap (46-146:93-190) 20 30 40 50 60 70 pF1KE6 LKAQQEERLDEINKQFLDDPKYSSDEDLPSKLEGFKEKYMEFDLNGNGDIDIMSLKRMLE ... ... . ..: . .: ::.: :: :.: XP_005 ADLNQGIGEPQSPSRRVFNPYTEFKEFSRKQIKDMEKMFKQYDAGRDGFIDLMELKLMME 70 80 90 100 110 120 80 90 100 110 120 130 pF1KE6 KLGVPKTHLELKKLIGEVSSGSGETFSYPDFLRMMLGKRSAILKMILMYEEKAREKEKPT :::.:.::: ::..: ::. .:. . . ...: .. . :.. :.:. XP_005 KLGAPQTHLGLKNMIKEVDEDFDSKLSFREVQAINVSSR---FEEEIKAEQEERKKQAEE 130 140 150 160 170 140 pF1KE6 GPPAKKAISELP : :..:: XP_005 MKQRKAAFKELQSTFK 180 190 >>NP_077305 (OMIM: 616450) EF-hand domain-containing pro (240 aa) initn: 135 init1: 135 opt: 156 Z-score: 194.4 bits: 42.7 E(85289): 0.00044 Smith-Waterman score: 156; 36.6% identity (71.8% similar) in 71 aa overlap (46-116:93-162) 20 30 40 50 60 70 pF1KE6 LKAQQEERLDEINKQFLDDPKYSSDEDLPSKLEGFKEKYMEFDLNGNGDIDIMSLKRMLE ... ... . ..: . .: ::.: :: :.: NP_077 ADLNQGIGEPQSPSRRVFNPYTEFKEFSRKQIKDMEKMFKQYDAGRDGFIDLMELKLMME 70 80 90 100 110 120 80 90 100 110 120 130 pF1KE6 KLGVPKTHLELKKLIGEVSSGSGETFSYPDFLRMMLGKRSAILKMILMYEEKAREKEKPT :::.:.::: ::..: ::. .:. .:: ... : .: NP_077 KLGAPQTHLGLKNMIKEVDEDFDSKLSFREFL-LIFRKAAAGELQEDSGLCVLARLSEID 130 140 150 160 170 180 140 pF1KE6 GPPAKKAISELP NP_077 VSSEGVKGAKSFFEAKVQAINVSSRFEEEIKAEQEERKKQAEEMKQRKAAFKELQSTFK 190 200 210 220 230 240 >>NP_001230181 (OMIM: 611617) EF-hand domain-containing (143 aa) initn: 133 init1: 133 opt: 152 Z-score: 192.3 bits: 41.5 E(85289): 0.00057 Smith-Waterman score: 152; 41.9% identity (72.6% similar) in 62 aa overlap (55-116:4-64) 30 40 50 60 70 80 pF1KE6 DEINKQFLDDPKYSSDEDLPSKLEGFKEKYMEFDLNGNGDIDIMSLKRMLEKLGVPKTHL ...: . .: ::.: :: :.::::.:.::: NP_001 MGELQYDAGRDGFIDLMELKLMMEKLGAPQTHL 10 20 30 90 100 110 120 130 140 pF1KE6 ELKKLIGEVSSGSGETFSYPDFLRMMLGKRSAILKMILMYEEKAREKEKPTGPPAKKAIS ::..: ::. .:. .:: ... : .: NP_001 GLKSMIKEVDEDFDGKLSFREFL-LIFHKAAAGELQEDSGLMALAKLSEIDVALEGVKGA 40 50 60 70 80 90 pF1KE6 ELP NP_001 KNFFEAKVQALSSASKFEAELKAEQDERKREEEERRLRQAAFQKLKANFNT 100 110 120 130 140 >>NP_001292553 (OMIM: 114182,616249) calmodulin isoform (197 aa) initn: 246 init1: 141 opt: 152 Z-score: 190.6 bits: 41.7 E(85289): 0.0007 Smith-Waterman score: 152; 32.2% identity (64.4% similar) in 87 aa overlap (27-113:39-124) 10 20 30 40 50 pF1KE6 MSQTRDLQGGKAFGLLKAQQEERLDEINKQFLDDPKYSSDEDLPSKLEGFKEKYME : ..: ..: ..:. .. ::: . NP_001 RISPSGESELSGCVVASRKPVALAAWLALYIASHFAQQPC-KADQLTEEQIAEFKEAFSL 10 20 30 40 50 60 60 70 80 90 100 110 pF1KE6 FDLNGNGDIDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFSYPDFLRMMLGKRSA :: .:.: : : ....:: :. ::. .:.::.. .. :...:.:: :: : NP_001 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKD 70 80 90 100 110 120 120 130 140 pF1KE6 ILKMILMYEEKAREKEKPTGPPAKKAISELP NP_001 TDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNY 130 140 150 160 170 180 >>NP_079478 (OMIM: 611617) EF-hand domain-containing pro (239 aa) initn: 153 init1: 133 opt: 150 Z-score: 187.2 bits: 41.3 E(85289): 0.0011 Smith-Waterman score: 150; 33.9% identity (62.4% similar) in 109 aa overlap (16-116:55-160) 10 20 30 40 pF1KE6 MSQTRDLQGGKAFGLLKAQQEERLDEINKQFLDDPK----YSSDE :.:: .::: ::. :. .. NP_079 QLAPLGAPAPEPKPEPEPPARAPTASADAELSAQLSRRLD-INEG-AARPRRCRVFNPYT 30 40 50 60 70 80 50 60 70 80 90 pF1KE6 DLP--SK--LEGFKEKYMEFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGS ..: :. .. .. . .: . .: ::.: :: :.::::.:.::: ::..: ::. NP_079 EFPEFSRRLIKDLESMFKLYDAGRDGFIDLMELKLMMEKLGAPQTHLGLKSMIKEVDEDF 90 100 110 120 130 140 100 110 120 130 140 pF1KE6 GETFSYPDFLRMMLGKRSAILKMILMYEEKAREKEKPTGPPAKKAISELP .:. .:: ... : .: NP_079 DGKLSFREFL-LIFHKAAAGELQEDSGLMALAKLSEIDVALEGVKGAKNFFEAKVQALSS 150 160 170 180 190 200 147 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 14:21:34 2016 done: Tue Nov 8 14:21:35 2016 Total Scan time: 4.830 Total Display time: -0.010 Function used was FASTA [36.3.4 Apr, 2011]