FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE6553, 147 aa 1>>>pF1KE6553 147 - 147 aa - 147 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.0657+/-0.000612; mu= 13.6296+/- 0.037 mean_var=69.9294+/-13.461, 0's: 0 Z-trim(112.1): 35 B-trim: 0 in 0/52 Lambda= 0.153371 statistics sampled from 12904 (12938) to 12904 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.776), E-opt: 0.2 (0.397), width: 16 Scan time: 1.130 The best scores are: opt bits E(32554) CCDS4706.1 AIF1 gene_id:199|Hs108|chr6 ( 147) 955 219.3 6.9e-58 CCDS6939.1 AIF1L gene_id:83543|Hs108|chr9 ( 150) 632 147.8 2.3e-36 CCDS34398.1 AIF1 gene_id:199|Hs108|chr6 ( 93) 599 140.3 2.5e-34 CCDS55348.1 AIF1L gene_id:83543|Hs108|chr9 ( 176) 517 122.4 1.2e-28 CCDS55349.1 AIF1L gene_id:83543|Hs108|chr9 ( 102) 449 107.2 2.6e-24 >>CCDS4706.1 AIF1 gene_id:199|Hs108|chr6 (147 aa) initn: 955 init1: 955 opt: 955 Z-score: 1152.7 bits: 219.3 E(32554): 6.9e-58 Smith-Waterman score: 955; 100.0% identity (100.0% similar) in 147 aa overlap (1-147:1-147) 10 20 30 40 50 60 pF1KE6 MSQTRDLQGGKAFGLLKAQQEERLDEINKQFLDDPKYSSDEDLPSKLEGFKEKYMEFDLN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 MSQTRDLQGGKAFGLLKAQQEERLDEINKQFLDDPKYSSDEDLPSKLEGFKEKYMEFDLN 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 GNGDIDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFSYPDFLRMMLGKRSAILKM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 GNGDIDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFSYPDFLRMMLGKRSAILKM 70 80 90 100 110 120 130 140 pF1KE6 ILMYEEKAREKEKPTGPPAKKAISELP ::::::::::::::::::::::::::: CCDS47 ILMYEEKAREKEKPTGPPAKKAISELP 130 140 >>CCDS6939.1 AIF1L gene_id:83543|Hs108|chr9 (150 aa) initn: 630 init1: 579 opt: 632 Z-score: 766.3 bits: 147.8 E(32554): 2.3e-36 Smith-Waterman score: 632; 66.2% identity (89.4% similar) in 142 aa overlap (7-147:9-150) 10 20 30 40 50 pF1KE6 MSQTRDLQGGKAFGLLKAQQEERLDEINKQFLDDPKYSSDEDLPSKLEGFKEKYMEFD .:::::::::::.::.:: :::..:: : :::..:.:: :: .::::::::: CCDS69 MSGELSNRFQGGKAFGLLKARQERRLAEINREFLCDQKYSDEENLPEKLTAFKEKYMEFD 10 20 30 40 50 60 60 70 80 90 100 110 pF1KE6 LNGNGDIDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFSYPDFLRMMLGKRSAIL ::..:.::.::::::.:::::::::::.::.:.::..: ..:.:: ::. ::::::::.: CCDS69 LNNEGEIDLMSLKRMMEKLGVPKTHLEMKKMISEVTGGVSDTISYRDFVNMMLGKRSAVL 70 80 90 100 110 120 120 130 140 pF1KE6 KMILMYEEKAREKE-KPTGPPAKKAISELP :...:.: :: :. ::.::: .. :. :: CCDS69 KLVMMFEGKANESSPKPVGPPPERDIASLP 130 140 150 >>CCDS34398.1 AIF1 gene_id:199|Hs108|chr6 (93 aa) initn: 599 init1: 599 opt: 599 Z-score: 729.7 bits: 140.3 E(32554): 2.5e-34 Smith-Waterman score: 599; 100.0% identity (100.0% similar) in 93 aa overlap (55-147:1-93) 30 40 50 60 70 80 pF1KE6 DEINKQFLDDPKYSSDEDLPSKLEGFKEKYMEFDLNGNGDIDIMSLKRMLEKLGVPKTHL :::::::::::::::::::::::::::::: CCDS34 MEFDLNGNGDIDIMSLKRMLEKLGVPKTHL 10 20 30 90 100 110 120 130 140 pF1KE6 ELKKLIGEVSSGSGETFSYPDFLRMMLGKRSAILKMILMYEEKAREKEKPTGPPAKKAIS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 ELKKLIGEVSSGSGETFSYPDFLRMMLGKRSAILKMILMYEEKAREKEKPTGPPAKKAIS 40 50 60 70 80 90 pF1KE6 ELP ::: CCDS34 ELP >>CCDS55348.1 AIF1L gene_id:83543|Hs108|chr9 (176 aa) initn: 615 init1: 461 opt: 517 Z-score: 627.8 bits: 122.4 E(32554): 1.2e-28 Smith-Waterman score: 570; 56.0% identity (75.6% similar) in 168 aa overlap (7-147:9-176) 10 20 30 pF1KE6 MSQTRDLQGGKAFGLLKAQQEERLDEINK--------------------------QFL .:::::::::::.::.:: :::. .:: CCDS55 MSGELSNRFQGGKAFGLLKARQERRLAEINRYCAGREPQLQRISCSQHSCLLALLFQEFL 10 20 30 40 50 60 40 50 60 70 80 90 pF1KE6 DDPKYSSDEDLPSKLEGFKEKYMEFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKKLIGE : :::..:.:: :: .:::::::::::..:.::.::::::.:::::::::::.::.:.: CCDS55 CDQKYSDEENLPEKLTAFKEKYMEFDLNNEGEIDLMSLKRMMEKLGVPKTHLEMKKMISE 70 80 90 100 110 120 100 110 120 130 140 pF1KE6 VSSGSGETFSYPDFLRMMLGKRSAILKMILMYEEKAREKE-KPTGPPAKKAISELP :..: ..:.:: ::. ::::::::.::...:.: :: :. ::.::: .. :. :: CCDS55 VTGGVSDTISYRDFVNMMLGKRSAVLKLVMMFEGKANESSPKPVGPPPERDIASLP 130 140 150 160 170 >>CCDS55349.1 AIF1L gene_id:83543|Hs108|chr9 (102 aa) initn: 449 init1: 449 opt: 449 Z-score: 549.8 bits: 107.2 E(32554): 2.6e-24 Smith-Waterman score: 449; 73.6% identity (94.5% similar) in 91 aa overlap (7-97:9-99) 10 20 30 40 50 pF1KE6 MSQTRDLQGGKAFGLLKAQQEERLDEINKQFLDDPKYSSDEDLPSKLEGFKEKYMEFD .:::::::::::.::.:: :::..:: : :::..:.:: :: .::::::::: CCDS55 MSGELSNRFQGGKAFGLLKARQERRLAEINREFLCDQKYSDEENLPEKLTAFKEKYMEFD 10 20 30 40 50 60 60 70 80 90 100 110 pF1KE6 LNGNGDIDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFSYPDFLRMMLGKRSAIL ::..:.::.::::::.:::::::::::.::.:.::..:: CCDS55 LNNEGEIDLMSLKRMMEKLGVPKTHLEMKKMISEVTGGSHDV 70 80 90 100 120 130 140 pF1KE6 KMILMYEEKAREKEKPTGPPAKKAISELP 147 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 14:21:34 2016 done: Tue Nov 8 14:21:34 2016 Total Scan time: 1.130 Total Display time: -0.030 Function used was FASTA [36.3.4 Apr, 2011]