FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE6501, 136 aa
  1>>>pF1KE6501 136 - 136 aa - 136 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 10.6695+/-0.000831; mu= -9.6212+/- 0.050
 mean_var=419.1942+/-85.070, 0's: 0 Z-trim(120.6): 14  B-trim: 225 in 1/53
 Lambda= 0.062642
 statistics sampled from 22198 (22213) to 22198 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.894), E-opt: 0.2 (0.682), width:  16
 Scan time:  1.760

The best scores are:                                      opt bits E(32554)
CCDS4694.1 PSORS1C2 gene_id:170680|Hs108|chr6      ( 136) 1074 108.8 1.1e-24


>>CCDS4694.1 PSORS1C2 gene_id:170680|Hs108|chr6           (136 aa)
 initn: 1074 init1: 1074 opt: 1074  Z-score: 556.6  bits: 108.8 E(32554): 1.1e-24
Smith-Waterman score: 1074; 100.0% identity (100.0% similar) in 136 aa overlap (1-136:1-136)

               10        20        30        40        50        60
pF1KE6 MILNWKLLGILVLCLHTRGISGSEGHPSHPPAEDREEAGSPTLPQGPPVPGDPWPGAPPL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 MILNWKLLGILVLCLHTRGISGSEGHPSHPPAEDREEAGSPTLPQGPPVPGDPWPGAPPL
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE6 FEDPPPTRPSRPWRDLPETGVWLPEPPRTDPPQPPRPDDPWPAGPQPPENPWPPAPEVDN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 FEDPPPTRPSRPWRDLPETGVWLPEPPRTDPPQPPRPDDPWPAGPQPPENPWPPAPEVDN
               70        80        90       100       110       120

              130      
pF1KE6 RPQEEPDLDPPREEYR
       ::::::::::::::::
CCDS46 RPQEEPDLDPPREEYR
              130      




136 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Tue Nov  8 13:53:26 2016 done: Tue Nov  8 13:53:26 2016
 Total Scan time:  1.760 Total Display time: -0.020

Function used was FASTA [36.3.4 Apr, 2011]