Result of FASTA (omim) for
pFN21AE4134
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE4134, 539 aa
1>>>pF1KE4134 539 - 539 aa - 539 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 9.4948+/-0.0005; mu= 0.4400+/- 0.031
mean_var=341.9380+/-70.806, 0's: 0 Z-trim(119.2): 165 B-trim: 1714 in 1/52
Lambda= 0.069359
statistics sampled from 32816 (32990) to 32816 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.719), E-opt: 0.2 (0.387), width: 16
Scan time: 11.220
The best scores are: opt bits E(85289)
XP_005249431 (OMIM: 600830) PREDICTED: tripartite ( 539) 3647 379.3 1.7e-104
XP_005249432 (OMIM: 600830) PREDICTED: tripartite ( 539) 3647 379.3 1.7e-104
XP_005249434 (OMIM: 600830) PREDICTED: tripartite ( 539) 3647 379.3 1.7e-104
XP_005249433 (OMIM: 600830) PREDICTED: tripartite ( 539) 3647 379.3 1.7e-104
NP_001229712 (OMIM: 600830) tripartite motif-conta ( 539) 3647 379.3 1.7e-104
XP_005249435 (OMIM: 600830) PREDICTED: tripartite ( 539) 3647 379.3 1.7e-104
XP_006715243 (OMIM: 600830) PREDICTED: tripartite ( 539) 3647 379.3 1.7e-104
NP_003440 (OMIM: 600830) tripartite motif-containi ( 539) 3647 379.3 1.7e-104
XP_011513161 (OMIM: 600830) PREDICTED: tripartite ( 462) 1962 210.6 8.6e-54
XP_016866752 (OMIM: 600830) PREDICTED: tripartite ( 462) 1962 210.6 8.6e-54
NP_006769 (OMIM: 605701) tripartite motif-containi ( 481) 905 104.8 6.1e-22
NP_439893 (OMIM: 605701) tripartite motif-containi ( 395) 898 104.0 8.7e-22
XP_011512525 (OMIM: 605701) PREDICTED: tripartite ( 499) 839 98.2 6.1e-20
XP_011512524 (OMIM: 605701) PREDICTED: tripartite ( 499) 839 98.2 6.1e-20
XP_011512523 (OMIM: 605701) PREDICTED: tripartite ( 499) 839 98.2 6.1e-20
XP_011512527 (OMIM: 605701) PREDICTED: tripartite ( 413) 832 97.5 8.8e-20
XP_011512567 (OMIM: 609316) PREDICTED: E3 ubiquiti ( 421) 637 78.0 6.6e-14
NP_008959 (OMIM: 609316) E3 ubiquitin-protein liga ( 425) 637 78.0 6.7e-14
NP_477514 (OMIM: 607564) tripartite motif-containi ( 488) 637 78.0 7.3e-14
NP_001003818 (OMIM: 607564) tripartite motif-conta ( 516) 637 78.1 7.6e-14
NP_006501 (OMIM: 602165) zinc finger protein RFP [ ( 513) 627 77.0 1.5e-13
XP_011512566 (OMIM: 609316) PREDICTED: E3 ubiquiti ( 424) 619 76.2 2.3e-13
NP_060543 (OMIM: 613184) E3 ubiquitin-protein liga ( 485) 603 74.6 7.7e-13
XP_011512568 (OMIM: 609316) PREDICTED: E3 ubiquiti ( 261) 586 72.6 1.7e-12
NP_006065 (OMIM: 606559) E3 ubiquitin-protein liga ( 498) 574 71.7 5.8e-12
NP_742013 (OMIM: 605700) E3 ubiquitin-protein liga ( 488) 548 69.1 3.5e-11
NP_976038 (OMIM: 609315) tripartite motif-containi ( 511) 547 69.0 3.9e-11
NP_067076 (OMIM: 605700) E3 ubiquitin-protein liga ( 518) 537 68.0 7.8e-11
NP_291027 (OMIM: 610530) E3 ubiquitin-protein liga ( 630) 532 67.6 1.3e-10
XP_006714995 (OMIM: 610530) PREDICTED: E3 ubiquiti ( 520) 519 66.2 2.7e-10
XP_006714992 (OMIM: 610530) PREDICTED: E3 ubiquiti ( 543) 519 66.3 2.8e-10
NP_963921 (OMIM: 610530) E3 ubiquitin-protein liga ( 518) 506 64.9 6.7e-10
XP_006714993 (OMIM: 610530) PREDICTED: E3 ubiquiti ( 541) 506 65.0 6.9e-10
NP_149023 (OMIM: 608487) tripartite motif-containi ( 493) 500 64.3 9.8e-10
XP_005253240 (OMIM: 608487) PREDICTED: tripartite ( 493) 500 64.3 9.8e-10
NP_067629 (OMIM: 605684) tripartite motif-containi ( 488) 495 63.8 1.4e-09
NP_001003827 (OMIM: 605684) tripartite motif-conta ( 488) 495 63.8 1.4e-09
XP_006714994 (OMIM: 610530) PREDICTED: E3 ubiquiti ( 525) 495 63.9 1.5e-09
XP_016856907 (OMIM: 606123) PREDICTED: E3 ubiquiti ( 262) 469 60.9 5.6e-09
XP_016856908 (OMIM: 606123) PREDICTED: E3 ubiquiti ( 262) 469 60.9 5.6e-09
NP_001128327 (OMIM: 606123) E3 ubiquitin-protein l ( 343) 469 61.0 6.7e-09
NP_569074 (OMIM: 605684) tripartite motif-containi ( 270) 466 60.6 7e-09
NP_001020111 (OMIM: 606123) E3 ubiquitin-protein l ( 477) 469 61.2 8.3e-09
XP_006711842 (OMIM: 606123) PREDICTED: E3 ubiquiti ( 477) 469 61.2 8.3e-09
XP_011542512 (OMIM: 606123) PREDICTED: E3 ubiquiti ( 477) 469 61.2 8.3e-09
NP_057186 (OMIM: 606123) E3 ubiquitin-protein liga ( 477) 469 61.2 8.3e-09
XP_011542511 (OMIM: 606123) PREDICTED: E3 ubiquiti ( 477) 469 61.2 8.3e-09
NP_001186502 (OMIM: 606559) E3 ubiquitin-protein l ( 494) 446 58.9 4.2e-08
XP_011518729 (OMIM: 608487) PREDICTED: tripartite ( 271) 425 56.5 1.2e-07
XP_006718421 (OMIM: 608487) PREDICTED: tripartite ( 265) 423 56.3 1.4e-07
>>XP_005249431 (OMIM: 600830) PREDICTED: tripartite moti (539 aa)
initn: 3647 init1: 3647 opt: 3647 Z-score: 1997.1 bits: 379.3 E(85289): 1.7e-104
Smith-Waterman score: 3647; 100.0% identity (100.0% similar) in 539 aa overlap (1-539:1-539)
10 20 30 40 50 60
pF1KE4 MATSAPLRSLEEEVTCSICLDYLRDPVTIDCGHVFCRSCTTDVRPISGSRPVCPLCKKPF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MATSAPLRSLEEEVTCSICLDYLRDPVTIDCGHVFCRSCTTDVRPISGSRPVCPLCKKPF
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE4 KKENIRPVWQLASLVENIERLKVDKGRQPGEVTREQQDAKLCERHREKLHYYCEDDGKLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 KKENIRPVWQLASLVENIERLKVDKGRQPGEVTREQQDAKLCERHREKLHYYCEDDGKLL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE4 CVMCRESREHRPHTAVLMEKAAQPHREKILNHLSTLRRDRDKIQGFQAKGEADILAALKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 CVMCRESREHRPHTAVLMEKAAQPHREKILNHLSTLRRDRDKIQGFQAKGEADILAALKK
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE4 LQDQRQYIVAEFEQGHQFLREREEHLLEQLAKLEQELTEGREKFKSRGVGELARLALVIS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LQDQRQYIVAEFEQGHQFLREREEHLLEQLAKLEQELTEGREKFKSRGVGELARLALVIS
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE4 ELEGKAQQPAAELMQDTRDFLNRYPRKKFWVGKPIARVVKKKTGEFSDKLLSLQRGLREF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ELEGKAQQPAAELMQDTRDFLNRYPRKKFWVGKPIARVVKKKTGEFSDKLLSLQRGLREF
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE4 QGKLLRDLEYKTVSVTLDPQSASGYLQLSEDWKCVTYTSLYKSAYLHPQQFDCEPGVLGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 QGKLLRDLEYKTVSVTLDPQSASGYLQLSEDWKCVTYTSLYKSAYLHPQQFDCEPGVLGS
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE4 KGFTWGKVYWEVEVEREGWSEDEEEGDEEEEGEEEEEEEEAGYGDGYDDWETDEDEESLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 KGFTWGKVYWEVEVEREGWSEDEEEGDEEEEGEEEEEEEEAGYGDGYDDWETDEDEESLG
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE4 DEEEEEEEEEEEVLESCMVGVARDSVKRKGDLSLRPEDGVWALRLSSSGIWANTSPEAEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 DEEEEEEEEEEEVLESCMVGVARDSVKRKGDLSLRPEDGVWALRLSSSGIWANTSPEAEL
430 440 450 460 470 480
490 500 510 520 530
pF1KE4 FPALRPRRVGIALDYEGGTVTFTNAESQELIYTFTATFTRRLVPFLWLKWPGTRLLLRP
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 FPALRPRRVGIALDYEGGTVTFTNAESQELIYTFTATFTRRLVPFLWLKWPGTRLLLRP
490 500 510 520 530
>>XP_005249432 (OMIM: 600830) PREDICTED: tripartite moti (539 aa)
initn: 3647 init1: 3647 opt: 3647 Z-score: 1997.1 bits: 379.3 E(85289): 1.7e-104
Smith-Waterman score: 3647; 100.0% identity (100.0% similar) in 539 aa overlap (1-539:1-539)
10 20 30 40 50 60
pF1KE4 MATSAPLRSLEEEVTCSICLDYLRDPVTIDCGHVFCRSCTTDVRPISGSRPVCPLCKKPF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MATSAPLRSLEEEVTCSICLDYLRDPVTIDCGHVFCRSCTTDVRPISGSRPVCPLCKKPF
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE4 KKENIRPVWQLASLVENIERLKVDKGRQPGEVTREQQDAKLCERHREKLHYYCEDDGKLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 KKENIRPVWQLASLVENIERLKVDKGRQPGEVTREQQDAKLCERHREKLHYYCEDDGKLL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE4 CVMCRESREHRPHTAVLMEKAAQPHREKILNHLSTLRRDRDKIQGFQAKGEADILAALKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 CVMCRESREHRPHTAVLMEKAAQPHREKILNHLSTLRRDRDKIQGFQAKGEADILAALKK
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE4 LQDQRQYIVAEFEQGHQFLREREEHLLEQLAKLEQELTEGREKFKSRGVGELARLALVIS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LQDQRQYIVAEFEQGHQFLREREEHLLEQLAKLEQELTEGREKFKSRGVGELARLALVIS
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE4 ELEGKAQQPAAELMQDTRDFLNRYPRKKFWVGKPIARVVKKKTGEFSDKLLSLQRGLREF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ELEGKAQQPAAELMQDTRDFLNRYPRKKFWVGKPIARVVKKKTGEFSDKLLSLQRGLREF
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE4 QGKLLRDLEYKTVSVTLDPQSASGYLQLSEDWKCVTYTSLYKSAYLHPQQFDCEPGVLGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 QGKLLRDLEYKTVSVTLDPQSASGYLQLSEDWKCVTYTSLYKSAYLHPQQFDCEPGVLGS
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE4 KGFTWGKVYWEVEVEREGWSEDEEEGDEEEEGEEEEEEEEAGYGDGYDDWETDEDEESLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 KGFTWGKVYWEVEVEREGWSEDEEEGDEEEEGEEEEEEEEAGYGDGYDDWETDEDEESLG
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE4 DEEEEEEEEEEEVLESCMVGVARDSVKRKGDLSLRPEDGVWALRLSSSGIWANTSPEAEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 DEEEEEEEEEEEVLESCMVGVARDSVKRKGDLSLRPEDGVWALRLSSSGIWANTSPEAEL
430 440 450 460 470 480
490 500 510 520 530
pF1KE4 FPALRPRRVGIALDYEGGTVTFTNAESQELIYTFTATFTRRLVPFLWLKWPGTRLLLRP
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 FPALRPRRVGIALDYEGGTVTFTNAESQELIYTFTATFTRRLVPFLWLKWPGTRLLLRP
490 500 510 520 530
>>XP_005249434 (OMIM: 600830) PREDICTED: tripartite moti (539 aa)
initn: 3647 init1: 3647 opt: 3647 Z-score: 1997.1 bits: 379.3 E(85289): 1.7e-104
Smith-Waterman score: 3647; 100.0% identity (100.0% similar) in 539 aa overlap (1-539:1-539)
10 20 30 40 50 60
pF1KE4 MATSAPLRSLEEEVTCSICLDYLRDPVTIDCGHVFCRSCTTDVRPISGSRPVCPLCKKPF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MATSAPLRSLEEEVTCSICLDYLRDPVTIDCGHVFCRSCTTDVRPISGSRPVCPLCKKPF
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE4 KKENIRPVWQLASLVENIERLKVDKGRQPGEVTREQQDAKLCERHREKLHYYCEDDGKLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 KKENIRPVWQLASLVENIERLKVDKGRQPGEVTREQQDAKLCERHREKLHYYCEDDGKLL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE4 CVMCRESREHRPHTAVLMEKAAQPHREKILNHLSTLRRDRDKIQGFQAKGEADILAALKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 CVMCRESREHRPHTAVLMEKAAQPHREKILNHLSTLRRDRDKIQGFQAKGEADILAALKK
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE4 LQDQRQYIVAEFEQGHQFLREREEHLLEQLAKLEQELTEGREKFKSRGVGELARLALVIS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LQDQRQYIVAEFEQGHQFLREREEHLLEQLAKLEQELTEGREKFKSRGVGELARLALVIS
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE4 ELEGKAQQPAAELMQDTRDFLNRYPRKKFWVGKPIARVVKKKTGEFSDKLLSLQRGLREF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ELEGKAQQPAAELMQDTRDFLNRYPRKKFWVGKPIARVVKKKTGEFSDKLLSLQRGLREF
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE4 QGKLLRDLEYKTVSVTLDPQSASGYLQLSEDWKCVTYTSLYKSAYLHPQQFDCEPGVLGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 QGKLLRDLEYKTVSVTLDPQSASGYLQLSEDWKCVTYTSLYKSAYLHPQQFDCEPGVLGS
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE4 KGFTWGKVYWEVEVEREGWSEDEEEGDEEEEGEEEEEEEEAGYGDGYDDWETDEDEESLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 KGFTWGKVYWEVEVEREGWSEDEEEGDEEEEGEEEEEEEEAGYGDGYDDWETDEDEESLG
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE4 DEEEEEEEEEEEVLESCMVGVARDSVKRKGDLSLRPEDGVWALRLSSSGIWANTSPEAEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 DEEEEEEEEEEEVLESCMVGVARDSVKRKGDLSLRPEDGVWALRLSSSGIWANTSPEAEL
430 440 450 460 470 480
490 500 510 520 530
pF1KE4 FPALRPRRVGIALDYEGGTVTFTNAESQELIYTFTATFTRRLVPFLWLKWPGTRLLLRP
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 FPALRPRRVGIALDYEGGTVTFTNAESQELIYTFTATFTRRLVPFLWLKWPGTRLLLRP
490 500 510 520 530
>>XP_005249433 (OMIM: 600830) PREDICTED: tripartite moti (539 aa)
initn: 3647 init1: 3647 opt: 3647 Z-score: 1997.1 bits: 379.3 E(85289): 1.7e-104
Smith-Waterman score: 3647; 100.0% identity (100.0% similar) in 539 aa overlap (1-539:1-539)
10 20 30 40 50 60
pF1KE4 MATSAPLRSLEEEVTCSICLDYLRDPVTIDCGHVFCRSCTTDVRPISGSRPVCPLCKKPF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MATSAPLRSLEEEVTCSICLDYLRDPVTIDCGHVFCRSCTTDVRPISGSRPVCPLCKKPF
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE4 KKENIRPVWQLASLVENIERLKVDKGRQPGEVTREQQDAKLCERHREKLHYYCEDDGKLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 KKENIRPVWQLASLVENIERLKVDKGRQPGEVTREQQDAKLCERHREKLHYYCEDDGKLL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE4 CVMCRESREHRPHTAVLMEKAAQPHREKILNHLSTLRRDRDKIQGFQAKGEADILAALKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 CVMCRESREHRPHTAVLMEKAAQPHREKILNHLSTLRRDRDKIQGFQAKGEADILAALKK
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE4 LQDQRQYIVAEFEQGHQFLREREEHLLEQLAKLEQELTEGREKFKSRGVGELARLALVIS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LQDQRQYIVAEFEQGHQFLREREEHLLEQLAKLEQELTEGREKFKSRGVGELARLALVIS
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE4 ELEGKAQQPAAELMQDTRDFLNRYPRKKFWVGKPIARVVKKKTGEFSDKLLSLQRGLREF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ELEGKAQQPAAELMQDTRDFLNRYPRKKFWVGKPIARVVKKKTGEFSDKLLSLQRGLREF
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE4 QGKLLRDLEYKTVSVTLDPQSASGYLQLSEDWKCVTYTSLYKSAYLHPQQFDCEPGVLGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 QGKLLRDLEYKTVSVTLDPQSASGYLQLSEDWKCVTYTSLYKSAYLHPQQFDCEPGVLGS
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE4 KGFTWGKVYWEVEVEREGWSEDEEEGDEEEEGEEEEEEEEAGYGDGYDDWETDEDEESLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 KGFTWGKVYWEVEVEREGWSEDEEEGDEEEEGEEEEEEEEAGYGDGYDDWETDEDEESLG
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE4 DEEEEEEEEEEEVLESCMVGVARDSVKRKGDLSLRPEDGVWALRLSSSGIWANTSPEAEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 DEEEEEEEEEEEVLESCMVGVARDSVKRKGDLSLRPEDGVWALRLSSSGIWANTSPEAEL
430 440 450 460 470 480
490 500 510 520 530
pF1KE4 FPALRPRRVGIALDYEGGTVTFTNAESQELIYTFTATFTRRLVPFLWLKWPGTRLLLRP
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 FPALRPRRVGIALDYEGGTVTFTNAESQELIYTFTATFTRRLVPFLWLKWPGTRLLLRP
490 500 510 520 530
>>NP_001229712 (OMIM: 600830) tripartite motif-containin (539 aa)
initn: 3647 init1: 3647 opt: 3647 Z-score: 1997.1 bits: 379.3 E(85289): 1.7e-104
Smith-Waterman score: 3647; 100.0% identity (100.0% similar) in 539 aa overlap (1-539:1-539)
10 20 30 40 50 60
pF1KE4 MATSAPLRSLEEEVTCSICLDYLRDPVTIDCGHVFCRSCTTDVRPISGSRPVCPLCKKPF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MATSAPLRSLEEEVTCSICLDYLRDPVTIDCGHVFCRSCTTDVRPISGSRPVCPLCKKPF
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE4 KKENIRPVWQLASLVENIERLKVDKGRQPGEVTREQQDAKLCERHREKLHYYCEDDGKLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KKENIRPVWQLASLVENIERLKVDKGRQPGEVTREQQDAKLCERHREKLHYYCEDDGKLL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE4 CVMCRESREHRPHTAVLMEKAAQPHREKILNHLSTLRRDRDKIQGFQAKGEADILAALKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 CVMCRESREHRPHTAVLMEKAAQPHREKILNHLSTLRRDRDKIQGFQAKGEADILAALKK
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE4 LQDQRQYIVAEFEQGHQFLREREEHLLEQLAKLEQELTEGREKFKSRGVGELARLALVIS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LQDQRQYIVAEFEQGHQFLREREEHLLEQLAKLEQELTEGREKFKSRGVGELARLALVIS
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE4 ELEGKAQQPAAELMQDTRDFLNRYPRKKFWVGKPIARVVKKKTGEFSDKLLSLQRGLREF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ELEGKAQQPAAELMQDTRDFLNRYPRKKFWVGKPIARVVKKKTGEFSDKLLSLQRGLREF
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE4 QGKLLRDLEYKTVSVTLDPQSASGYLQLSEDWKCVTYTSLYKSAYLHPQQFDCEPGVLGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QGKLLRDLEYKTVSVTLDPQSASGYLQLSEDWKCVTYTSLYKSAYLHPQQFDCEPGVLGS
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE4 KGFTWGKVYWEVEVEREGWSEDEEEGDEEEEGEEEEEEEEAGYGDGYDDWETDEDEESLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KGFTWGKVYWEVEVEREGWSEDEEEGDEEEEGEEEEEEEEAGYGDGYDDWETDEDEESLG
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE4 DEEEEEEEEEEEVLESCMVGVARDSVKRKGDLSLRPEDGVWALRLSSSGIWANTSPEAEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DEEEEEEEEEEEVLESCMVGVARDSVKRKGDLSLRPEDGVWALRLSSSGIWANTSPEAEL
430 440 450 460 470 480
490 500 510 520 530
pF1KE4 FPALRPRRVGIALDYEGGTVTFTNAESQELIYTFTATFTRRLVPFLWLKWPGTRLLLRP
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FPALRPRRVGIALDYEGGTVTFTNAESQELIYTFTATFTRRLVPFLWLKWPGTRLLLRP
490 500 510 520 530
>>XP_005249435 (OMIM: 600830) PREDICTED: tripartite moti (539 aa)
initn: 3647 init1: 3647 opt: 3647 Z-score: 1997.1 bits: 379.3 E(85289): 1.7e-104
Smith-Waterman score: 3647; 100.0% identity (100.0% similar) in 539 aa overlap (1-539:1-539)
10 20 30 40 50 60
pF1KE4 MATSAPLRSLEEEVTCSICLDYLRDPVTIDCGHVFCRSCTTDVRPISGSRPVCPLCKKPF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MATSAPLRSLEEEVTCSICLDYLRDPVTIDCGHVFCRSCTTDVRPISGSRPVCPLCKKPF
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE4 KKENIRPVWQLASLVENIERLKVDKGRQPGEVTREQQDAKLCERHREKLHYYCEDDGKLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 KKENIRPVWQLASLVENIERLKVDKGRQPGEVTREQQDAKLCERHREKLHYYCEDDGKLL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE4 CVMCRESREHRPHTAVLMEKAAQPHREKILNHLSTLRRDRDKIQGFQAKGEADILAALKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 CVMCRESREHRPHTAVLMEKAAQPHREKILNHLSTLRRDRDKIQGFQAKGEADILAALKK
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE4 LQDQRQYIVAEFEQGHQFLREREEHLLEQLAKLEQELTEGREKFKSRGVGELARLALVIS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LQDQRQYIVAEFEQGHQFLREREEHLLEQLAKLEQELTEGREKFKSRGVGELARLALVIS
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE4 ELEGKAQQPAAELMQDTRDFLNRYPRKKFWVGKPIARVVKKKTGEFSDKLLSLQRGLREF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ELEGKAQQPAAELMQDTRDFLNRYPRKKFWVGKPIARVVKKKTGEFSDKLLSLQRGLREF
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE4 QGKLLRDLEYKTVSVTLDPQSASGYLQLSEDWKCVTYTSLYKSAYLHPQQFDCEPGVLGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 QGKLLRDLEYKTVSVTLDPQSASGYLQLSEDWKCVTYTSLYKSAYLHPQQFDCEPGVLGS
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE4 KGFTWGKVYWEVEVEREGWSEDEEEGDEEEEGEEEEEEEEAGYGDGYDDWETDEDEESLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 KGFTWGKVYWEVEVEREGWSEDEEEGDEEEEGEEEEEEEEAGYGDGYDDWETDEDEESLG
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE4 DEEEEEEEEEEEVLESCMVGVARDSVKRKGDLSLRPEDGVWALRLSSSGIWANTSPEAEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 DEEEEEEEEEEEVLESCMVGVARDSVKRKGDLSLRPEDGVWALRLSSSGIWANTSPEAEL
430 440 450 460 470 480
490 500 510 520 530
pF1KE4 FPALRPRRVGIALDYEGGTVTFTNAESQELIYTFTATFTRRLVPFLWLKWPGTRLLLRP
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 FPALRPRRVGIALDYEGGTVTFTNAESQELIYTFTATFTRRLVPFLWLKWPGTRLLLRP
490 500 510 520 530
>>XP_006715243 (OMIM: 600830) PREDICTED: tripartite moti (539 aa)
initn: 3647 init1: 3647 opt: 3647 Z-score: 1997.1 bits: 379.3 E(85289): 1.7e-104
Smith-Waterman score: 3647; 100.0% identity (100.0% similar) in 539 aa overlap (1-539:1-539)
10 20 30 40 50 60
pF1KE4 MATSAPLRSLEEEVTCSICLDYLRDPVTIDCGHVFCRSCTTDVRPISGSRPVCPLCKKPF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 MATSAPLRSLEEEVTCSICLDYLRDPVTIDCGHVFCRSCTTDVRPISGSRPVCPLCKKPF
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE4 KKENIRPVWQLASLVENIERLKVDKGRQPGEVTREQQDAKLCERHREKLHYYCEDDGKLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 KKENIRPVWQLASLVENIERLKVDKGRQPGEVTREQQDAKLCERHREKLHYYCEDDGKLL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE4 CVMCRESREHRPHTAVLMEKAAQPHREKILNHLSTLRRDRDKIQGFQAKGEADILAALKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 CVMCRESREHRPHTAVLMEKAAQPHREKILNHLSTLRRDRDKIQGFQAKGEADILAALKK
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE4 LQDQRQYIVAEFEQGHQFLREREEHLLEQLAKLEQELTEGREKFKSRGVGELARLALVIS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 LQDQRQYIVAEFEQGHQFLREREEHLLEQLAKLEQELTEGREKFKSRGVGELARLALVIS
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE4 ELEGKAQQPAAELMQDTRDFLNRYPRKKFWVGKPIARVVKKKTGEFSDKLLSLQRGLREF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 ELEGKAQQPAAELMQDTRDFLNRYPRKKFWVGKPIARVVKKKTGEFSDKLLSLQRGLREF
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE4 QGKLLRDLEYKTVSVTLDPQSASGYLQLSEDWKCVTYTSLYKSAYLHPQQFDCEPGVLGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 QGKLLRDLEYKTVSVTLDPQSASGYLQLSEDWKCVTYTSLYKSAYLHPQQFDCEPGVLGS
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE4 KGFTWGKVYWEVEVEREGWSEDEEEGDEEEEGEEEEEEEEAGYGDGYDDWETDEDEESLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 KGFTWGKVYWEVEVEREGWSEDEEEGDEEEEGEEEEEEEEAGYGDGYDDWETDEDEESLG
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE4 DEEEEEEEEEEEVLESCMVGVARDSVKRKGDLSLRPEDGVWALRLSSSGIWANTSPEAEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 DEEEEEEEEEEEVLESCMVGVARDSVKRKGDLSLRPEDGVWALRLSSSGIWANTSPEAEL
430 440 450 460 470 480
490 500 510 520 530
pF1KE4 FPALRPRRVGIALDYEGGTVTFTNAESQELIYTFTATFTRRLVPFLWLKWPGTRLLLRP
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 FPALRPRRVGIALDYEGGTVTFTNAESQELIYTFTATFTRRLVPFLWLKWPGTRLLLRP
490 500 510 520 530
>>NP_003440 (OMIM: 600830) tripartite motif-containing p (539 aa)
initn: 3647 init1: 3647 opt: 3647 Z-score: 1997.1 bits: 379.3 E(85289): 1.7e-104
Smith-Waterman score: 3647; 100.0% identity (100.0% similar) in 539 aa overlap (1-539:1-539)
10 20 30 40 50 60
pF1KE4 MATSAPLRSLEEEVTCSICLDYLRDPVTIDCGHVFCRSCTTDVRPISGSRPVCPLCKKPF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 MATSAPLRSLEEEVTCSICLDYLRDPVTIDCGHVFCRSCTTDVRPISGSRPVCPLCKKPF
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE4 KKENIRPVWQLASLVENIERLKVDKGRQPGEVTREQQDAKLCERHREKLHYYCEDDGKLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 KKENIRPVWQLASLVENIERLKVDKGRQPGEVTREQQDAKLCERHREKLHYYCEDDGKLL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE4 CVMCRESREHRPHTAVLMEKAAQPHREKILNHLSTLRRDRDKIQGFQAKGEADILAALKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 CVMCRESREHRPHTAVLMEKAAQPHREKILNHLSTLRRDRDKIQGFQAKGEADILAALKK
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE4 LQDQRQYIVAEFEQGHQFLREREEHLLEQLAKLEQELTEGREKFKSRGVGELARLALVIS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 LQDQRQYIVAEFEQGHQFLREREEHLLEQLAKLEQELTEGREKFKSRGVGELARLALVIS
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE4 ELEGKAQQPAAELMQDTRDFLNRYPRKKFWVGKPIARVVKKKTGEFSDKLLSLQRGLREF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 ELEGKAQQPAAELMQDTRDFLNRYPRKKFWVGKPIARVVKKKTGEFSDKLLSLQRGLREF
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE4 QGKLLRDLEYKTVSVTLDPQSASGYLQLSEDWKCVTYTSLYKSAYLHPQQFDCEPGVLGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 QGKLLRDLEYKTVSVTLDPQSASGYLQLSEDWKCVTYTSLYKSAYLHPQQFDCEPGVLGS
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE4 KGFTWGKVYWEVEVEREGWSEDEEEGDEEEEGEEEEEEEEAGYGDGYDDWETDEDEESLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 KGFTWGKVYWEVEVEREGWSEDEEEGDEEEEGEEEEEEEEAGYGDGYDDWETDEDEESLG
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE4 DEEEEEEEEEEEVLESCMVGVARDSVKRKGDLSLRPEDGVWALRLSSSGIWANTSPEAEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 DEEEEEEEEEEEVLESCMVGVARDSVKRKGDLSLRPEDGVWALRLSSSGIWANTSPEAEL
430 440 450 460 470 480
490 500 510 520 530
pF1KE4 FPALRPRRVGIALDYEGGTVTFTNAESQELIYTFTATFTRRLVPFLWLKWPGTRLLLRP
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 FPALRPRRVGIALDYEGGTVTFTNAESQELIYTFTATFTRRLVPFLWLKWPGTRLLLRP
490 500 510 520 530
>>XP_011513161 (OMIM: 600830) PREDICTED: tripartite moti (462 aa)
initn: 1927 init1: 1927 opt: 1962 Z-score: 1086.7 bits: 210.6 E(85289): 8.6e-54
Smith-Waterman score: 2999; 85.7% identity (85.7% similar) in 539 aa overlap (1-539:1-462)
10 20 30 40 50 60
pF1KE4 MATSAPLRSLEEEVTCSICLDYLRDPVTIDCGHVFCRSCTTDVRPISGSRPVCPLCKKPF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MATSAPLRSLEEEVTCSICLDYLRDPVTIDCGHVFCRSCTTDVRPISGSRPVCPLCKKPF
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE4 KKENIRPVWQLASLVENIERLKVDKGRQPGEVTREQQDAKLCERHREKLHYYCEDDGKLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KKENIRPVWQLASLVENIERLKVDKGRQPGEVTREQQDAKLCERHREKLHYYCEDDGKLL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE4 CVMCRESREHRPHTAVLMEKAAQPHREKILNHLSTLRRDRDKIQGFQAKGEADILAALKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 CVMCRESREHRPHTAVLMEKAAQPHREKILNHLSTLRRDRDKIQGFQAKGEADILAAL--
130 140 150 160 170
190 200 210 220 230 240
pF1KE4 LQDQRQYIVAEFEQGHQFLREREEHLLEQLAKLEQELTEGREKFKSRGVGELARLALVIS
XP_011 ------------------------------------------------------------
250 260 270 280 290 300
pF1KE4 ELEGKAQQPAAELMQDTRDFLNRYPRKKFWVGKPIARVVKKKTGEFSDKLLSLQRGLREF
:::::::::::::::::::::::::::::::::::::::::::::
XP_011 ---------------DTRDFLNRYPRKKFWVGKPIARVVKKKTGEFSDKLLSLQRGLREF
180 190 200 210 220
310 320 330 340 350 360
pF1KE4 QGKLLRDLEYKTVSVTLDPQSASGYLQLSEDWKCVTYTSLYKSAYLHPQQFDCEPGVLGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QGKLLRDLEYKTVSVTLDPQSASGYLQLSEDWKCVTYTSLYKSAYLHPQQFDCEPGVLGS
230 240 250 260 270 280
370 380 390 400 410 420
pF1KE4 KGFTWGKVYWEVEVEREGWSEDEEEGDEEEEGEEEEEEEEAGYGDGYDDWETDEDEESLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KGFTWGKVYWEVEVEREGWSEDEEEGDEEEEGEEEEEEEEAGYGDGYDDWETDEDEESLG
290 300 310 320 330 340
430 440 450 460 470 480
pF1KE4 DEEEEEEEEEEEVLESCMVGVARDSVKRKGDLSLRPEDGVWALRLSSSGIWANTSPEAEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DEEEEEEEEEEEVLESCMVGVARDSVKRKGDLSLRPEDGVWALRLSSSGIWANTSPEAEL
350 360 370 380 390 400
490 500 510 520 530
pF1KE4 FPALRPRRVGIALDYEGGTVTFTNAESQELIYTFTATFTRRLVPFLWLKWPGTRLLLRP
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 FPALRPRRVGIALDYEGGTVTFTNAESQELIYTFTATFTRRLVPFLWLKWPGTRLLLRP
410 420 430 440 450 460
>>XP_016866752 (OMIM: 600830) PREDICTED: tripartite moti (462 aa)
initn: 1927 init1: 1927 opt: 1962 Z-score: 1086.7 bits: 210.6 E(85289): 8.6e-54
Smith-Waterman score: 2999; 85.7% identity (85.7% similar) in 539 aa overlap (1-539:1-462)
10 20 30 40 50 60
pF1KE4 MATSAPLRSLEEEVTCSICLDYLRDPVTIDCGHVFCRSCTTDVRPISGSRPVCPLCKKPF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MATSAPLRSLEEEVTCSICLDYLRDPVTIDCGHVFCRSCTTDVRPISGSRPVCPLCKKPF
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE4 KKENIRPVWQLASLVENIERLKVDKGRQPGEVTREQQDAKLCERHREKLHYYCEDDGKLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KKENIRPVWQLASLVENIERLKVDKGRQPGEVTREQQDAKLCERHREKLHYYCEDDGKLL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE4 CVMCRESREHRPHTAVLMEKAAQPHREKILNHLSTLRRDRDKIQGFQAKGEADILAALKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 CVMCRESREHRPHTAVLMEKAAQPHREKILNHLSTLRRDRDKIQGFQAKGEADILAAL--
130 140 150 160 170
190 200 210 220 230 240
pF1KE4 LQDQRQYIVAEFEQGHQFLREREEHLLEQLAKLEQELTEGREKFKSRGVGELARLALVIS
XP_016 ------------------------------------------------------------
250 260 270 280 290 300
pF1KE4 ELEGKAQQPAAELMQDTRDFLNRYPRKKFWVGKPIARVVKKKTGEFSDKLLSLQRGLREF
:::::::::::::::::::::::::::::::::::::::::::::
XP_016 ---------------DTRDFLNRYPRKKFWVGKPIARVVKKKTGEFSDKLLSLQRGLREF
180 190 200 210 220
310 320 330 340 350 360
pF1KE4 QGKLLRDLEYKTVSVTLDPQSASGYLQLSEDWKCVTYTSLYKSAYLHPQQFDCEPGVLGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QGKLLRDLEYKTVSVTLDPQSASGYLQLSEDWKCVTYTSLYKSAYLHPQQFDCEPGVLGS
230 240 250 260 270 280
370 380 390 400 410 420
pF1KE4 KGFTWGKVYWEVEVEREGWSEDEEEGDEEEEGEEEEEEEEAGYGDGYDDWETDEDEESLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KGFTWGKVYWEVEVEREGWSEDEEEGDEEEEGEEEEEEEEAGYGDGYDDWETDEDEESLG
290 300 310 320 330 340
430 440 450 460 470 480
pF1KE4 DEEEEEEEEEEEVLESCMVGVARDSVKRKGDLSLRPEDGVWALRLSSSGIWANTSPEAEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DEEEEEEEEEEEVLESCMVGVARDSVKRKGDLSLRPEDGVWALRLSSSGIWANTSPEAEL
350 360 370 380 390 400
490 500 510 520 530
pF1KE4 FPALRPRRVGIALDYEGGTVTFTNAESQELIYTFTATFTRRLVPFLWLKWPGTRLLLRP
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 FPALRPRRVGIALDYEGGTVTFTNAESQELIYTFTATFTRRLVPFLWLKWPGTRLLLRP
410 420 430 440 450 460
539 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 16:53:07 2016 done: Sun Nov 6 16:53:09 2016
Total Scan time: 11.220 Total Display time: 0.100
Function used was FASTA [36.3.4 Apr, 2011]