FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE4110, 481 aa 1>>>pF1KE4110 481 - 481 aa - 481 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 7.7984+/-0.000484; mu= 7.0241+/- 0.030 mean_var=204.3373+/-44.010, 0's: 0 Z-trim(116.3): 239 B-trim: 1633 in 2/52 Lambda= 0.089722 statistics sampled from 27047 (27341) to 27047 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.682), E-opt: 0.2 (0.321), width: 16 Scan time: 10.080 The best scores are: opt bits E(85289) NP_006769 (OMIM: 605701) tripartite motif-containi ( 481) 3287 438.6 1.8e-122 XP_011512523 (OMIM: 605701) PREDICTED: tripartite ( 499) 3156 421.7 2.4e-117 XP_011512524 (OMIM: 605701) PREDICTED: tripartite ( 499) 3156 421.7 2.4e-117 XP_011512525 (OMIM: 605701) PREDICTED: tripartite ( 499) 3156 421.7 2.4e-117 NP_439893 (OMIM: 605701) tripartite motif-containi ( 395) 2536 341.3 2.9e-93 XP_011512527 (OMIM: 605701) PREDICTED: tripartite ( 413) 2405 324.4 3.8e-88 XP_005249434 (OMIM: 600830) PREDICTED: tripartite ( 539) 905 130.3 1.3e-29 NP_003440 (OMIM: 600830) tripartite motif-containi ( 539) 905 130.3 1.3e-29 XP_005249433 (OMIM: 600830) PREDICTED: tripartite ( 539) 905 130.3 1.3e-29 XP_005249435 (OMIM: 600830) PREDICTED: tripartite ( 539) 905 130.3 1.3e-29 NP_001229712 (OMIM: 600830) tripartite motif-conta ( 539) 905 130.3 1.3e-29 XP_006715243 (OMIM: 600830) PREDICTED: tripartite ( 539) 905 130.3 1.3e-29 XP_005249432 (OMIM: 600830) PREDICTED: tripartite ( 539) 905 130.3 1.3e-29 XP_005249431 (OMIM: 600830) PREDICTED: tripartite ( 539) 905 130.3 1.3e-29 NP_060543 (OMIM: 613184) E3 ubiquitin-protein liga ( 485) 808 117.7 7.2e-26 NP_976038 (OMIM: 609315) tripartite motif-containi ( 511) 754 110.8 9.4e-24 NP_006501 (OMIM: 602165) zinc finger protein RFP [ ( 513) 746 109.7 1.9e-23 NP_742013 (OMIM: 605700) E3 ubiquitin-protein liga ( 488) 704 104.3 8.1e-22 NP_477514 (OMIM: 607564) tripartite motif-containi ( 488) 692 102.7 2.4e-21 NP_001003818 (OMIM: 607564) tripartite motif-conta ( 516) 692 102.8 2.5e-21 NP_067629 (OMIM: 605684) tripartite motif-containi ( 488) 630 94.7 6.2e-19 NP_001003827 (OMIM: 605684) tripartite motif-conta ( 488) 630 94.7 6.2e-19 NP_067076 (OMIM: 605700) E3 ubiquitin-protein liga ( 518) 618 93.2 1.9e-18 NP_291027 (OMIM: 610530) E3 ubiquitin-protein liga ( 630) 619 93.4 2e-18 XP_006714995 (OMIM: 610530) PREDICTED: E3 ubiquiti ( 520) 615 92.8 2.5e-18 XP_006714992 (OMIM: 610530) PREDICTED: E3 ubiquiti ( 543) 615 92.8 2.6e-18 NP_963921 (OMIM: 610530) E3 ubiquitin-protein liga ( 518) 613 92.5 3e-18 XP_006714994 (OMIM: 610530) PREDICTED: E3 ubiquiti ( 525) 613 92.5 3e-18 XP_006714993 (OMIM: 610530) PREDICTED: E3 ubiquiti ( 541) 613 92.5 3.1e-18 XP_011512567 (OMIM: 609316) PREDICTED: E3 ubiquiti ( 421) 600 90.8 8.3e-18 NP_008959 (OMIM: 609316) E3 ubiquitin-protein liga ( 425) 600 90.8 8.3e-18 XP_011512566 (OMIM: 609316) PREDICTED: E3 ubiquiti ( 424) 583 88.6 3.8e-17 NP_149023 (OMIM: 608487) tripartite motif-containi ( 493) 579 88.1 6.1e-17 XP_005253240 (OMIM: 608487) PREDICTED: tripartite ( 493) 579 88.1 6.1e-17 NP_976042 (OMIM: 609315) tripartite motif-containi ( 329) 572 87.0 8.6e-17 XP_011512568 (OMIM: 609316) PREDICTED: E3 ubiquiti ( 261) 564 85.9 1.5e-16 NP_976040 (OMIM: 609315) tripartite motif-containi ( 303) 561 85.6 2.2e-16 NP_976041 (OMIM: 609315) tripartite motif-containi ( 303) 561 85.6 2.2e-16 XP_016865392 (OMIM: 609315) PREDICTED: tripartite ( 303) 561 85.6 2.2e-16 NP_976039 (OMIM: 609315) tripartite motif-containi ( 303) 561 85.6 2.2e-16 NP_006065 (OMIM: 606559) E3 ubiquitin-protein liga ( 498) 541 83.2 1.8e-15 XP_016873951 (OMIM: 608487) PREDICTED: tripartite ( 300) 534 82.1 2.4e-15 XP_005253241 (OMIM: 608487) PREDICTED: tripartite ( 326) 534 82.1 2.6e-15 NP_149084 (OMIM: 608487) tripartite motif-containi ( 326) 534 82.1 2.6e-15 NP_149083 (OMIM: 608487) tripartite motif-containi ( 347) 534 82.1 2.7e-15 NP_660215 (OMIM: 607868) E3 ubiquitin-protein liga ( 468) 536 82.5 2.8e-15 NP_060677 (OMIM: 616755) E3 ubiquitin-protein liga ( 475) 536 82.5 2.8e-15 NP_003132 (OMIM: 109092) E3 ubiquitin-protein liga ( 475) 534 82.3 3.3e-15 XP_016857118 (OMIM: 616755) PREDICTED: E3 ubiquiti ( 555) 533 82.2 4.1e-15 XP_011518729 (OMIM: 608487) PREDICTED: tripartite ( 271) 520 80.2 7.9e-15 >>NP_006769 (OMIM: 605701) tripartite motif-containing p (481 aa) initn: 3287 init1: 3287 opt: 3287 Z-score: 2319.7 bits: 438.6 E(85289): 1.8e-122 Smith-Waterman score: 3287; 100.0% identity (100.0% similar) in 481 aa overlap (1-481:1-481) 10 20 30 40 50 60 pF1KE4 MASAASVTSLADEVNCPICQGTLREPVTIDCGHNFCRACLTRYCEIPGPDLEESPTCPLC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_006 MASAASVTSLADEVNCPICQGTLREPVTIDCGHNFCRACLTRYCEIPGPDLEESPTCPLC 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE4 KEPFRPGSFRPNWQLANVVENIERLQLVSTLGLGEEDVCQEHGEKIYFFCEDDEMQLCVV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_006 KEPFRPGSFRPNWQLANVVENIERLQLVSTLGLGEEDVCQEHGEKIYFFCEDDEMQLCVV 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE4 CREAGEHATHTMRFLEDAAAPYREQIHKCLKCLRKEREEIQEIQSRENKRMQVLLTQVST :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_006 CREAGEHATHTMRFLEDAAAPYREQIHKCLKCLRKEREEIQEIQSRENKRMQVLLTQVST 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE4 KRQQVISEFAHLRKFLEEQQSILLAQLESQDGDILRQRDEFDLLVAGEICRFSALIEELE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_006 KRQQVISEFAHLRKFLEEQQSILLAQLESQDGDILRQRDEFDLLVAGEICRFSALIEELE 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE4 EKNERPARELLTDIRSTLIRCETRKCRKPVAVSPELGQRIRDFPQQALPLQREMKMFLEK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_006 EKNERPARELLTDIRSTLIRCETRKCRKPVAVSPELGQRIRDFPQQALPLQREMKMFLEK 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE4 LCFELDYEPAHISLDPQTSHPKLLLSEDHQRAQFSYKWQNSPDNPQRFDRATCVLAHTGI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_006 LCFELDYEPAHISLDPQTSHPKLLLSEDHQRAQFSYKWQNSPDNPQRFDRATCVLAHTGI 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE4 TGGRHTWVVSIDLAHGGSCTVGVVSEDVQRKGELRLRPEEGVWAVRLAWGFVSALGSFPT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_006 TGGRHTWVVSIDLAHGGSCTVGVVSEDVQRKGELRLRPEEGVWAVRLAWGFVSALGSFPT 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE4 RLTLKEQPRQVRVSLDYEVGWVTFTNAVTREPIYTFTASFTRKVIPFFGLWGRGSSFSLS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_006 RLTLKEQPRQVRVSLDYEVGWVTFTNAVTREPIYTFTASFTRKVIPFFGLWGRGSSFSLS 430 440 450 460 470 480 pF1KE4 S : NP_006 S >>XP_011512523 (OMIM: 605701) PREDICTED: tripartite moti (499 aa) initn: 3156 init1: 3156 opt: 3156 Z-score: 2227.9 bits: 421.7 E(85289): 2.4e-117 Smith-Waterman score: 3156; 100.0% identity (100.0% similar) in 461 aa overlap (21-481:39-499) 10 20 30 40 50 pF1KE4 MASAASVTSLADEVNCPICQGTLREPVTIDCGHNFCRACLTRYCEIPGPD :::::::::::::::::::::::::::::: XP_011 LHSVTQSPTCPQKNISSDSGQLTYHHFPSTGTLREPVTIDCGHNFCRACLTRYCEIPGPD 10 20 30 40 50 60 60 70 80 90 100 110 pF1KE4 LEESPTCPLCKEPFRPGSFRPNWQLANVVENIERLQLVSTLGLGEEDVCQEHGEKIYFFC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 LEESPTCPLCKEPFRPGSFRPNWQLANVVENIERLQLVSTLGLGEEDVCQEHGEKIYFFC 70 80 90 100 110 120 120 130 140 150 160 170 pF1KE4 EDDEMQLCVVCREAGEHATHTMRFLEDAAAPYREQIHKCLKCLRKEREEIQEIQSRENKR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 EDDEMQLCVVCREAGEHATHTMRFLEDAAAPYREQIHKCLKCLRKEREEIQEIQSRENKR 130 140 150 160 170 180 180 190 200 210 220 230 pF1KE4 MQVLLTQVSTKRQQVISEFAHLRKFLEEQQSILLAQLESQDGDILRQRDEFDLLVAGEIC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 MQVLLTQVSTKRQQVISEFAHLRKFLEEQQSILLAQLESQDGDILRQRDEFDLLVAGEIC 190 200 210 220 230 240 240 250 260 270 280 290 pF1KE4 RFSALIEELEEKNERPARELLTDIRSTLIRCETRKCRKPVAVSPELGQRIRDFPQQALPL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 RFSALIEELEEKNERPARELLTDIRSTLIRCETRKCRKPVAVSPELGQRIRDFPQQALPL 250 260 270 280 290 300 300 310 320 330 340 350 pF1KE4 QREMKMFLEKLCFELDYEPAHISLDPQTSHPKLLLSEDHQRAQFSYKWQNSPDNPQRFDR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 QREMKMFLEKLCFELDYEPAHISLDPQTSHPKLLLSEDHQRAQFSYKWQNSPDNPQRFDR 310 320 330 340 350 360 360 370 380 390 400 410 pF1KE4 ATCVLAHTGITGGRHTWVVSIDLAHGGSCTVGVVSEDVQRKGELRLRPEEGVWAVRLAWG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 ATCVLAHTGITGGRHTWVVSIDLAHGGSCTVGVVSEDVQRKGELRLRPEEGVWAVRLAWG 370 380 390 400 410 420 420 430 440 450 460 470 pF1KE4 FVSALGSFPTRLTLKEQPRQVRVSLDYEVGWVTFTNAVTREPIYTFTASFTRKVIPFFGL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 FVSALGSFPTRLTLKEQPRQVRVSLDYEVGWVTFTNAVTREPIYTFTASFTRKVIPFFGL 430 440 450 460 470 480 480 pF1KE4 WGRGSSFSLSS ::::::::::: XP_011 WGRGSSFSLSS 490 >>XP_011512524 (OMIM: 605701) PREDICTED: tripartite moti (499 aa) initn: 3156 init1: 3156 opt: 3156 Z-score: 2227.9 bits: 421.7 E(85289): 2.4e-117 Smith-Waterman score: 3156; 100.0% identity (100.0% similar) in 461 aa overlap (21-481:39-499) 10 20 30 40 50 pF1KE4 MASAASVTSLADEVNCPICQGTLREPVTIDCGHNFCRACLTRYCEIPGPD :::::::::::::::::::::::::::::: XP_011 LHSVTQSPTCPQKNISSDSGQLTYHHFPSTGTLREPVTIDCGHNFCRACLTRYCEIPGPD 10 20 30 40 50 60 60 70 80 90 100 110 pF1KE4 LEESPTCPLCKEPFRPGSFRPNWQLANVVENIERLQLVSTLGLGEEDVCQEHGEKIYFFC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 LEESPTCPLCKEPFRPGSFRPNWQLANVVENIERLQLVSTLGLGEEDVCQEHGEKIYFFC 70 80 90 100 110 120 120 130 140 150 160 170 pF1KE4 EDDEMQLCVVCREAGEHATHTMRFLEDAAAPYREQIHKCLKCLRKEREEIQEIQSRENKR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 EDDEMQLCVVCREAGEHATHTMRFLEDAAAPYREQIHKCLKCLRKEREEIQEIQSRENKR 130 140 150 160 170 180 180 190 200 210 220 230 pF1KE4 MQVLLTQVSTKRQQVISEFAHLRKFLEEQQSILLAQLESQDGDILRQRDEFDLLVAGEIC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 MQVLLTQVSTKRQQVISEFAHLRKFLEEQQSILLAQLESQDGDILRQRDEFDLLVAGEIC 190 200 210 220 230 240 240 250 260 270 280 290 pF1KE4 RFSALIEELEEKNERPARELLTDIRSTLIRCETRKCRKPVAVSPELGQRIRDFPQQALPL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 RFSALIEELEEKNERPARELLTDIRSTLIRCETRKCRKPVAVSPELGQRIRDFPQQALPL 250 260 270 280 290 300 300 310 320 330 340 350 pF1KE4 QREMKMFLEKLCFELDYEPAHISLDPQTSHPKLLLSEDHQRAQFSYKWQNSPDNPQRFDR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 QREMKMFLEKLCFELDYEPAHISLDPQTSHPKLLLSEDHQRAQFSYKWQNSPDNPQRFDR 310 320 330 340 350 360 360 370 380 390 400 410 pF1KE4 ATCVLAHTGITGGRHTWVVSIDLAHGGSCTVGVVSEDVQRKGELRLRPEEGVWAVRLAWG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 ATCVLAHTGITGGRHTWVVSIDLAHGGSCTVGVVSEDVQRKGELRLRPEEGVWAVRLAWG 370 380 390 400 410 420 420 430 440 450 460 470 pF1KE4 FVSALGSFPTRLTLKEQPRQVRVSLDYEVGWVTFTNAVTREPIYTFTASFTRKVIPFFGL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 FVSALGSFPTRLTLKEQPRQVRVSLDYEVGWVTFTNAVTREPIYTFTASFTRKVIPFFGL 430 440 450 460 470 480 480 pF1KE4 WGRGSSFSLSS ::::::::::: XP_011 WGRGSSFSLSS 490 >>XP_011512525 (OMIM: 605701) PREDICTED: tripartite moti (499 aa) initn: 3156 init1: 3156 opt: 3156 Z-score: 2227.9 bits: 421.7 E(85289): 2.4e-117 Smith-Waterman score: 3156; 100.0% identity (100.0% similar) in 461 aa overlap (21-481:39-499) 10 20 30 40 50 pF1KE4 MASAASVTSLADEVNCPICQGTLREPVTIDCGHNFCRACLTRYCEIPGPD :::::::::::::::::::::::::::::: XP_011 LHSVTQSPTCPQKNISSDSGQLTYHHFPSTGTLREPVTIDCGHNFCRACLTRYCEIPGPD 10 20 30 40 50 60 60 70 80 90 100 110 pF1KE4 LEESPTCPLCKEPFRPGSFRPNWQLANVVENIERLQLVSTLGLGEEDVCQEHGEKIYFFC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 LEESPTCPLCKEPFRPGSFRPNWQLANVVENIERLQLVSTLGLGEEDVCQEHGEKIYFFC 70 80 90 100 110 120 120 130 140 150 160 170 pF1KE4 EDDEMQLCVVCREAGEHATHTMRFLEDAAAPYREQIHKCLKCLRKEREEIQEIQSRENKR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 EDDEMQLCVVCREAGEHATHTMRFLEDAAAPYREQIHKCLKCLRKEREEIQEIQSRENKR 130 140 150 160 170 180 180 190 200 210 220 230 pF1KE4 MQVLLTQVSTKRQQVISEFAHLRKFLEEQQSILLAQLESQDGDILRQRDEFDLLVAGEIC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 MQVLLTQVSTKRQQVISEFAHLRKFLEEQQSILLAQLESQDGDILRQRDEFDLLVAGEIC 190 200 210 220 230 240 240 250 260 270 280 290 pF1KE4 RFSALIEELEEKNERPARELLTDIRSTLIRCETRKCRKPVAVSPELGQRIRDFPQQALPL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 RFSALIEELEEKNERPARELLTDIRSTLIRCETRKCRKPVAVSPELGQRIRDFPQQALPL 250 260 270 280 290 300 300 310 320 330 340 350 pF1KE4 QREMKMFLEKLCFELDYEPAHISLDPQTSHPKLLLSEDHQRAQFSYKWQNSPDNPQRFDR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 QREMKMFLEKLCFELDYEPAHISLDPQTSHPKLLLSEDHQRAQFSYKWQNSPDNPQRFDR 310 320 330 340 350 360 360 370 380 390 400 410 pF1KE4 ATCVLAHTGITGGRHTWVVSIDLAHGGSCTVGVVSEDVQRKGELRLRPEEGVWAVRLAWG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 ATCVLAHTGITGGRHTWVVSIDLAHGGSCTVGVVSEDVQRKGELRLRPEEGVWAVRLAWG 370 380 390 400 410 420 420 430 440 450 460 470 pF1KE4 FVSALGSFPTRLTLKEQPRQVRVSLDYEVGWVTFTNAVTREPIYTFTASFTRKVIPFFGL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 FVSALGSFPTRLTLKEQPRQVRVSLDYEVGWVTFTNAVTREPIYTFTASFTRKVIPFFGL 430 440 450 460 470 480 480 pF1KE4 WGRGSSFSLSS ::::::::::: XP_011 WGRGSSFSLSS 490 >>NP_439893 (OMIM: 605701) tripartite motif-containing p (395 aa) initn: 2534 init1: 2534 opt: 2536 Z-score: 1795.4 bits: 341.3 E(85289): 2.9e-93 Smith-Waterman score: 2536; 97.4% identity (98.2% similar) in 379 aa overlap (1-379:1-379) 10 20 30 40 50 60 pF1KE4 MASAASVTSLADEVNCPICQGTLREPVTIDCGHNFCRACLTRYCEIPGPDLEESPTCPLC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_439 MASAASVTSLADEVNCPICQGTLREPVTIDCGHNFCRACLTRYCEIPGPDLEESPTCPLC 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE4 KEPFRPGSFRPNWQLANVVENIERLQLVSTLGLGEEDVCQEHGEKIYFFCEDDEMQLCVV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_439 KEPFRPGSFRPNWQLANVVENIERLQLVSTLGLGEEDVCQEHGEKIYFFCEDDEMQLCVV 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE4 CREAGEHATHTMRFLEDAAAPYREQIHKCLKCLRKEREEIQEIQSRENKRMQVLLTQVST :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_439 CREAGEHATHTMRFLEDAAAPYREQIHKCLKCLRKEREEIQEIQSRENKRMQVLLTQVST 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE4 KRQQVISEFAHLRKFLEEQQSILLAQLESQDGDILRQRDEFDLLVAGEICRFSALIEELE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_439 KRQQVISEFAHLRKFLEEQQSILLAQLESQDGDILRQRDEFDLLVAGEICRFSALIEELE 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE4 EKNERPARELLTDIRSTLIRCETRKCRKPVAVSPELGQRIRDFPQQALPLQREMKMFLEK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_439 EKNERPARELLTDIRSTLIRCETRKCRKPVAVSPELGQRIRDFPQQALPLQREMKMFLEK 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE4 LCFELDYEPAHISLDPQTSHPKLLLSEDHQRAQFSYKWQNSPDNPQRFDRATCVLAHTGI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_439 LCFELDYEPAHISLDPQTSHPKLLLSEDHQRAQFSYKWQNSPDNPQRFDRATCVLAHTGI 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE4 TGGRHTWVVSIDLAHGGSCTVGVVSEDVQRKGELRLRPEEGVWAVRLAWGFVSALGSFPT :::::::: . ..: NP_439 TGGRHTWVWMARVPGDSGCCQFCSPPSVLGTEVAA 370 380 390 >>XP_011512527 (OMIM: 605701) PREDICTED: tripartite moti (413 aa) initn: 2403 init1: 2403 opt: 2405 Z-score: 1703.5 bits: 324.4 E(85289): 3.8e-88 Smith-Waterman score: 2405; 97.2% identity (98.1% similar) in 359 aa overlap (21-379:39-397) 10 20 30 40 50 pF1KE4 MASAASVTSLADEVNCPICQGTLREPVTIDCGHNFCRACLTRYCEIPGPD :::::::::::::::::::::::::::::: XP_011 LHSVTQSPTCPQKNISSDSGQLTYHHFPSTGTLREPVTIDCGHNFCRACLTRYCEIPGPD 10 20 30 40 50 60 60 70 80 90 100 110 pF1KE4 LEESPTCPLCKEPFRPGSFRPNWQLANVVENIERLQLVSTLGLGEEDVCQEHGEKIYFFC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 LEESPTCPLCKEPFRPGSFRPNWQLANVVENIERLQLVSTLGLGEEDVCQEHGEKIYFFC 70 80 90 100 110 120 120 130 140 150 160 170 pF1KE4 EDDEMQLCVVCREAGEHATHTMRFLEDAAAPYREQIHKCLKCLRKEREEIQEIQSRENKR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 EDDEMQLCVVCREAGEHATHTMRFLEDAAAPYREQIHKCLKCLRKEREEIQEIQSRENKR 130 140 150 160 170 180 180 190 200 210 220 230 pF1KE4 MQVLLTQVSTKRQQVISEFAHLRKFLEEQQSILLAQLESQDGDILRQRDEFDLLVAGEIC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 MQVLLTQVSTKRQQVISEFAHLRKFLEEQQSILLAQLESQDGDILRQRDEFDLLVAGEIC 190 200 210 220 230 240 240 250 260 270 280 290 pF1KE4 RFSALIEELEEKNERPARELLTDIRSTLIRCETRKCRKPVAVSPELGQRIRDFPQQALPL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 RFSALIEELEEKNERPARELLTDIRSTLIRCETRKCRKPVAVSPELGQRIRDFPQQALPL 250 260 270 280 290 300 300 310 320 330 340 350 pF1KE4 QREMKMFLEKLCFELDYEPAHISLDPQTSHPKLLLSEDHQRAQFSYKWQNSPDNPQRFDR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 QREMKMFLEKLCFELDYEPAHISLDPQTSHPKLLLSEDHQRAQFSYKWQNSPDNPQRFDR 310 320 330 340 350 360 360 370 380 390 400 410 pF1KE4 ATCVLAHTGITGGRHTWVVSIDLAHGGSCTVGVVSEDVQRKGELRLRPEEGVWAVRLAWG :::::::::::::::::: . ..: XP_011 ATCVLAHTGITGGRHTWVWMARVPGDSGCCQFCSPPSVLGTEVAA 370 380 390 400 410 >>XP_005249434 (OMIM: 600830) PREDICTED: tripartite moti (539 aa) initn: 1225 init1: 549 opt: 905 Z-score: 652.7 bits: 130.3 E(85289): 1.3e-29 Smith-Waterman score: 1044; 37.0% identity (60.5% similar) in 522 aa overlap (1-458:1-516) 10 20 30 40 50 60 pF1KE4 MASAASVTSLADEVNCPICQGTLREPVTIDCGHNFCRACLTRYCEIPGPDLEESPTCPLC ::..: . :: .::.: :: ::.:::::::: :::.: : : : :.:::: XP_005 MATSAPLRSLEEEVTCSICLDYLRDPVTIDCGHVFCRSCTTDVRPISGS----RPVCPLC 10 20 30 40 50 70 80 90 100 110 pF1KE4 KEPFRPGSFRPNWQLANVVENIERLQLVSTLGLGE-----ED--VCQEHGEKIYFFCEDD :.::. ..:: ::::..:::::::.. . :: .: .:..: ::....:::: XP_005 KKPFKKENIRPVWQLASLVENIERLKVDKGRQPGEVTREQQDAKLCERHREKLHYYCEDD 60 70 80 90 100 110 120 130 140 150 160 170 pF1KE4 EMQLCVVCREAGEHATHTMRFLEDAAAPYREQIHKCLKCLRKEREEIQEIQSRENKRMQV :::.:::. :: :: ..: :: :.::.: . :. ::..:..:: .:.. . . . XP_005 GKLLCVMCRESREHRPHTAVLMEKAAQPHREKILNHLSTLRRDRDKIQGFQAKGEADILA 120 130 140 150 160 170 180 190 200 210 220 230 pF1KE4 LLTQVSTKRQQVISEFAHLRKFLEEQQSILLAQLESQDGDILRQRDEFDLLVAGEICRFS : ... .:: ...:: . ..::.:.. :: :: . . .. . :..: .::. :.. XP_005 ALKKLQDQRQYIVAEFEQGHQFLREREEHLLEQLAKLEQELTEGREKFKSRGVGELARLA 180 190 200 210 220 230 240 250 260 270 280 290 pF1KE4 ALIEELEEKNERPARELLTDIRSTLIRCETRK--CRKPVAVSPELGQRIRDFPQQALPLQ .: ::: : ..:: ::. : :. : : .: ::.: . .. .: .. : :: XP_005 LVISELEGKAQQPAAELMQDTRDFLNRYPRKKFWVGKPIARV--VKKKTGEFSDKLLSLQ 240 250 260 270 280 290 300 310 320 330 340 350 pF1KE4 REMKMFLEKLCFELDYEPAHISLDPQTSHPKLLLSEDHQRAQFSYKWQNSPDNPQRFDRA : .. : :: .:.:. . ..::::.. : :::: . . .. .... .::.:: XP_005 RGLREFQGKLLRDLEYKTVSVTLDPQSASGYLQLSEDWKCVTYTSLYKSAYLHPQQFDCE 300 310 320 330 340 350 360 370 pF1KE4 TCVLAHTGITGGRHTWVVSI-------DLAHGG--------------------------- ::. :.: :. : : . : .: XP_005 PGVLGSKGFTWGKVYWEVEVEREGWSEDEEEGDEEEEGEEEEEEEEAGYGDGYDDWETDE 360 370 380 390 400 410 380 390 400 410 pF1KE4 ---------------------SCTVGVVSEDVQRKGELRLRPEEGVWAVRLAWGFVSALG :: :::. ..:.:::.: ::::.::::.::. . . : XP_005 DEESLGDEEEEEEEEEEEVLESCMVGVARDSVKRKGDLSLRPEDGVWALRLSSSGIWANT 420 430 440 450 460 470 420 430 440 450 460 470 pF1KE4 SFPTRLTLKEQPRQVRVSLDYEVGWVTFTNAVTREPIYTFTASFTRKVIPFFGLWGRGSS : ..: .::.: ..:::: : :::::: ..: :::::: XP_005 SPEAELFPALRPRRVGIALDYEGGTVTFTNAESQELIYTFTATFTRRLVPFLWLKWPGTR 480 490 500 510 520 530 480 pF1KE4 FSLSS XP_005 LLLRP >>NP_003440 (OMIM: 600830) tripartite motif-containing p (539 aa) initn: 1225 init1: 549 opt: 905 Z-score: 652.7 bits: 130.3 E(85289): 1.3e-29 Smith-Waterman score: 1044; 37.0% identity (60.5% similar) in 522 aa overlap (1-458:1-516) 10 20 30 40 50 60 pF1KE4 MASAASVTSLADEVNCPICQGTLREPVTIDCGHNFCRACLTRYCEIPGPDLEESPTCPLC ::..: . :: .::.: :: ::.:::::::: :::.: : : : :.:::: NP_003 MATSAPLRSLEEEVTCSICLDYLRDPVTIDCGHVFCRSCTTDVRPISGS----RPVCPLC 10 20 30 40 50 70 80 90 100 110 pF1KE4 KEPFRPGSFRPNWQLANVVENIERLQLVSTLGLGE-----ED--VCQEHGEKIYFFCEDD :.::. ..:: ::::..:::::::.. . :: .: .:..: ::....:::: NP_003 KKPFKKENIRPVWQLASLVENIERLKVDKGRQPGEVTREQQDAKLCERHREKLHYYCEDD 60 70 80 90 100 110 120 130 140 150 160 170 pF1KE4 EMQLCVVCREAGEHATHTMRFLEDAAAPYREQIHKCLKCLRKEREEIQEIQSRENKRMQV :::.:::. :: :: ..: :: :.::.: . :. ::..:..:: .:.. . . . NP_003 GKLLCVMCRESREHRPHTAVLMEKAAQPHREKILNHLSTLRRDRDKIQGFQAKGEADILA 120 130 140 150 160 170 180 190 200 210 220 230 pF1KE4 LLTQVSTKRQQVISEFAHLRKFLEEQQSILLAQLESQDGDILRQRDEFDLLVAGEICRFS : ... .:: ...:: . ..::.:.. :: :: . . .. . :..: .::. :.. NP_003 ALKKLQDQRQYIVAEFEQGHQFLREREEHLLEQLAKLEQELTEGREKFKSRGVGELARLA 180 190 200 210 220 230 240 250 260 270 280 290 pF1KE4 ALIEELEEKNERPARELLTDIRSTLIRCETRK--CRKPVAVSPELGQRIRDFPQQALPLQ .: ::: : ..:: ::. : :. : : .: ::.: . .. .: .. : :: NP_003 LVISELEGKAQQPAAELMQDTRDFLNRYPRKKFWVGKPIARV--VKKKTGEFSDKLLSLQ 240 250 260 270 280 290 300 310 320 330 340 350 pF1KE4 REMKMFLEKLCFELDYEPAHISLDPQTSHPKLLLSEDHQRAQFSYKWQNSPDNPQRFDRA : .. : :: .:.:. . ..::::.. : :::: . . .. .... .::.:: NP_003 RGLREFQGKLLRDLEYKTVSVTLDPQSASGYLQLSEDWKCVTYTSLYKSAYLHPQQFDCE 300 310 320 330 340 350 360 370 pF1KE4 TCVLAHTGITGGRHTWVVSI-------DLAHGG--------------------------- ::. :.: :. : : . : .: NP_003 PGVLGSKGFTWGKVYWEVEVEREGWSEDEEEGDEEEEGEEEEEEEEAGYGDGYDDWETDE 360 370 380 390 400 410 380 390 400 410 pF1KE4 ---------------------SCTVGVVSEDVQRKGELRLRPEEGVWAVRLAWGFVSALG :: :::. ..:.:::.: ::::.::::.::. . . : NP_003 DEESLGDEEEEEEEEEEEVLESCMVGVARDSVKRKGDLSLRPEDGVWALRLSSSGIWANT 420 430 440 450 460 470 420 430 440 450 460 470 pF1KE4 SFPTRLTLKEQPRQVRVSLDYEVGWVTFTNAVTREPIYTFTASFTRKVIPFFGLWGRGSS : ..: .::.: ..:::: : :::::: ..: :::::: NP_003 SPEAELFPALRPRRVGIALDYEGGTVTFTNAESQELIYTFTATFTRRLVPFLWLKWPGTR 480 490 500 510 520 530 480 pF1KE4 FSLSS NP_003 LLLRP >>XP_005249433 (OMIM: 600830) PREDICTED: tripartite moti (539 aa) initn: 1225 init1: 549 opt: 905 Z-score: 652.7 bits: 130.3 E(85289): 1.3e-29 Smith-Waterman score: 1044; 37.0% identity (60.5% similar) in 522 aa overlap (1-458:1-516) 10 20 30 40 50 60 pF1KE4 MASAASVTSLADEVNCPICQGTLREPVTIDCGHNFCRACLTRYCEIPGPDLEESPTCPLC ::..: . :: .::.: :: ::.:::::::: :::.: : : : :.:::: XP_005 MATSAPLRSLEEEVTCSICLDYLRDPVTIDCGHVFCRSCTTDVRPISGS----RPVCPLC 10 20 30 40 50 70 80 90 100 110 pF1KE4 KEPFRPGSFRPNWQLANVVENIERLQLVSTLGLGE-----ED--VCQEHGEKIYFFCEDD :.::. ..:: ::::..:::::::.. . :: .: .:..: ::....:::: XP_005 KKPFKKENIRPVWQLASLVENIERLKVDKGRQPGEVTREQQDAKLCERHREKLHYYCEDD 60 70 80 90 100 110 120 130 140 150 160 170 pF1KE4 EMQLCVVCREAGEHATHTMRFLEDAAAPYREQIHKCLKCLRKEREEIQEIQSRENKRMQV :::.:::. :: :: ..: :: :.::.: . :. ::..:..:: .:.. . . . XP_005 GKLLCVMCRESREHRPHTAVLMEKAAQPHREKILNHLSTLRRDRDKIQGFQAKGEADILA 120 130 140 150 160 170 180 190 200 210 220 230 pF1KE4 LLTQVSTKRQQVISEFAHLRKFLEEQQSILLAQLESQDGDILRQRDEFDLLVAGEICRFS : ... .:: ...:: . ..::.:.. :: :: . . .. . :..: .::. :.. XP_005 ALKKLQDQRQYIVAEFEQGHQFLREREEHLLEQLAKLEQELTEGREKFKSRGVGELARLA 180 190 200 210 220 230 240 250 260 270 280 290 pF1KE4 ALIEELEEKNERPARELLTDIRSTLIRCETRK--CRKPVAVSPELGQRIRDFPQQALPLQ .: ::: : ..:: ::. : :. : : .: ::.: . .. .: .. : :: XP_005 LVISELEGKAQQPAAELMQDTRDFLNRYPRKKFWVGKPIARV--VKKKTGEFSDKLLSLQ 240 250 260 270 280 290 300 310 320 330 340 350 pF1KE4 REMKMFLEKLCFELDYEPAHISLDPQTSHPKLLLSEDHQRAQFSYKWQNSPDNPQRFDRA : .. : :: .:.:. . ..::::.. : :::: . . .. .... .::.:: XP_005 RGLREFQGKLLRDLEYKTVSVTLDPQSASGYLQLSEDWKCVTYTSLYKSAYLHPQQFDCE 300 310 320 330 340 350 360 370 pF1KE4 TCVLAHTGITGGRHTWVVSI-------DLAHGG--------------------------- ::. :.: :. : : . : .: XP_005 PGVLGSKGFTWGKVYWEVEVEREGWSEDEEEGDEEEEGEEEEEEEEAGYGDGYDDWETDE 360 370 380 390 400 410 380 390 400 410 pF1KE4 ---------------------SCTVGVVSEDVQRKGELRLRPEEGVWAVRLAWGFVSALG :: :::. ..:.:::.: ::::.::::.::. . . : XP_005 DEESLGDEEEEEEEEEEEVLESCMVGVARDSVKRKGDLSLRPEDGVWALRLSSSGIWANT 420 430 440 450 460 470 420 430 440 450 460 470 pF1KE4 SFPTRLTLKEQPRQVRVSLDYEVGWVTFTNAVTREPIYTFTASFTRKVIPFFGLWGRGSS : ..: .::.: ..:::: : :::::: ..: :::::: XP_005 SPEAELFPALRPRRVGIALDYEGGTVTFTNAESQELIYTFTATFTRRLVPFLWLKWPGTR 480 490 500 510 520 530 480 pF1KE4 FSLSS XP_005 LLLRP >>XP_005249435 (OMIM: 600830) PREDICTED: tripartite moti (539 aa) initn: 1225 init1: 549 opt: 905 Z-score: 652.7 bits: 130.3 E(85289): 1.3e-29 Smith-Waterman score: 1044; 37.0% identity (60.5% similar) in 522 aa overlap (1-458:1-516) 10 20 30 40 50 60 pF1KE4 MASAASVTSLADEVNCPICQGTLREPVTIDCGHNFCRACLTRYCEIPGPDLEESPTCPLC ::..: . :: .::.: :: ::.:::::::: :::.: : : : :.:::: XP_005 MATSAPLRSLEEEVTCSICLDYLRDPVTIDCGHVFCRSCTTDVRPISGS----RPVCPLC 10 20 30 40 50 70 80 90 100 110 pF1KE4 KEPFRPGSFRPNWQLANVVENIERLQLVSTLGLGE-----ED--VCQEHGEKIYFFCEDD :.::. ..:: ::::..:::::::.. . :: .: .:..: ::....:::: XP_005 KKPFKKENIRPVWQLASLVENIERLKVDKGRQPGEVTREQQDAKLCERHREKLHYYCEDD 60 70 80 90 100 110 120 130 140 150 160 170 pF1KE4 EMQLCVVCREAGEHATHTMRFLEDAAAPYREQIHKCLKCLRKEREEIQEIQSRENKRMQV :::.:::. :: :: ..: :: :.::.: . :. ::..:..:: .:.. . . . XP_005 GKLLCVMCRESREHRPHTAVLMEKAAQPHREKILNHLSTLRRDRDKIQGFQAKGEADILA 120 130 140 150 160 170 180 190 200 210 220 230 pF1KE4 LLTQVSTKRQQVISEFAHLRKFLEEQQSILLAQLESQDGDILRQRDEFDLLVAGEICRFS : ... .:: ...:: . ..::.:.. :: :: . . .. . :..: .::. :.. XP_005 ALKKLQDQRQYIVAEFEQGHQFLREREEHLLEQLAKLEQELTEGREKFKSRGVGELARLA 180 190 200 210 220 230 240 250 260 270 280 290 pF1KE4 ALIEELEEKNERPARELLTDIRSTLIRCETRK--CRKPVAVSPELGQRIRDFPQQALPLQ .: ::: : ..:: ::. : :. : : .: ::.: . .. .: .. : :: XP_005 LVISELEGKAQQPAAELMQDTRDFLNRYPRKKFWVGKPIARV--VKKKTGEFSDKLLSLQ 240 250 260 270 280 290 300 310 320 330 340 350 pF1KE4 REMKMFLEKLCFELDYEPAHISLDPQTSHPKLLLSEDHQRAQFSYKWQNSPDNPQRFDRA : .. : :: .:.:. . ..::::.. : :::: . . .. .... .::.:: XP_005 RGLREFQGKLLRDLEYKTVSVTLDPQSASGYLQLSEDWKCVTYTSLYKSAYLHPQQFDCE 300 310 320 330 340 350 360 370 pF1KE4 TCVLAHTGITGGRHTWVVSI-------DLAHGG--------------------------- ::. :.: :. : : . : .: XP_005 PGVLGSKGFTWGKVYWEVEVEREGWSEDEEEGDEEEEGEEEEEEEEAGYGDGYDDWETDE 360 370 380 390 400 410 380 390 400 410 pF1KE4 ---------------------SCTVGVVSEDVQRKGELRLRPEEGVWAVRLAWGFVSALG :: :::. ..:.:::.: ::::.::::.::. . . : XP_005 DEESLGDEEEEEEEEEEEVLESCMVGVARDSVKRKGDLSLRPEDGVWALRLSSSGIWANT 420 430 440 450 460 470 420 430 440 450 460 470 pF1KE4 SFPTRLTLKEQPRQVRVSLDYEVGWVTFTNAVTREPIYTFTASFTRKVIPFFGLWGRGSS : ..: .::.: ..:::: : :::::: ..: :::::: XP_005 SPEAELFPALRPRRVGIALDYEGGTVTFTNAESQELIYTFTATFTRRLVPFLWLKWPGTR 480 490 500 510 520 530 480 pF1KE4 FSLSS XP_005 LLLRP 481 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 03:14:02 2016 done: Sun Nov 6 03:14:04 2016 Total Scan time: 10.080 Total Display time: 0.070 Function used was FASTA [36.3.4 Apr, 2011]