FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE5431, 348 aa 1>>>pF1KE5431 348 - 348 aa - 348 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.5901+/-0.000826; mu= 15.4568+/- 0.050 mean_var=86.1176+/-17.133, 0's: 0 Z-trim(108.6): 70 B-trim: 0 in 0/52 Lambda= 0.138206 statistics sampled from 10270 (10347) to 10270 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.696), E-opt: 0.2 (0.318), width: 16 Scan time: 1.780 The best scores are: opt bits E(32554) CCDS4578.1 HFE gene_id:3077|Hs108|chr6 ( 348) 2411 490.5 8.7e-139 CCDS75412.1 HFE gene_id:3077|Hs108|chr6 ( 337) 2324 473.1 1.4e-133 CCDS47387.1 HFE gene_id:3077|Hs108|chr6 ( 325) 2100 428.5 3.9e-120 CCDS4580.1 HFE gene_id:3077|Hs108|chr6 ( 260) 1636 335.9 2.3e-92 CCDS54974.1 HFE gene_id:3077|Hs108|chr6 ( 334) 1466 302.1 4.5e-82 CCDS4579.1 HFE gene_id:3077|Hs108|chr6 ( 256) 985 206.1 2.7e-53 CCDS4581.1 HFE gene_id:3077|Hs108|chr6 ( 168) 978 204.5 5.1e-53 CCDS54975.1 HFE gene_id:3077|Hs108|chr6 ( 246) 907 190.5 1.3e-48 CCDS47386.1 HFE gene_id:3077|Hs108|chr6 ( 242) 894 187.9 7.5e-48 CCDS1342.1 MR1 gene_id:3140|Hs108|chr1 ( 341) 789 167.1 2e-41 CCDS34373.1 A gene_id:3105|Hs108|chr6 ( 365) 766 162.5 4.9e-40 CCDS34394.1 B gene_id:3106|Hs108|chr6 ( 362) 761 161.5 9.8e-40 CCDS34393.1 C gene_id:3107|Hs108|chr6 ( 366) 732 155.7 5.4e-38 CCDS43438.1 F gene_id:3134|Hs108|chr6 ( 346) 726 154.5 1.2e-37 CCDS43437.1 F gene_id:3134|Hs108|chr6 ( 442) 726 154.6 1.4e-37 CCDS34379.1 E gene_id:3133|Hs108|chr6 ( 358) 723 153.9 1.9e-37 CCDS4668.1 G gene_id:3135|Hs108|chr6 ( 338) 718 152.9 3.5e-37 CCDS5680.1 AZGP1 gene_id:563|Hs108|chr7 ( 298) 698 148.9 5.1e-36 CCDS43449.1 MICB gene_id:4277|Hs108|chr6 ( 383) 499 109.3 5.5e-24 CCDS53440.1 MR1 gene_id:3140|Hs108|chr1 ( 249) 492 107.8 1e-23 CCDS12770.1 FCGRT gene_id:2217|Hs108|chr19 ( 365) 492 107.9 1.4e-23 CCDS53441.1 MR1 gene_id:3140|Hs108|chr1 ( 214) 488 106.9 1.6e-23 CCDS56412.1 MICA gene_id:100507436|Hs108|chr6 ( 332) 479 105.3 7.7e-23 CCDS75423.1 MICB gene_id:4277|Hs108|chr6 ( 351) 476 104.7 1.2e-22 CCDS75421.1 MICA gene_id:100507436|Hs108|chr6 ( 235) 388 87.0 1.7e-17 CCDS1173.1 CD1D gene_id:912|Hs108|chr1 ( 335) 342 77.9 1.3e-14 CCDS43439.1 F gene_id:3134|Hs108|chr6 ( 254) 332 75.9 4.2e-14 CCDS75422.1 MICB gene_id:4277|Hs108|chr6 ( 340) 325 74.6 1.4e-13 CCDS4582.1 HFE gene_id:3077|Hs108|chr6 ( 76) 315 72.1 1.7e-13 CCDS1174.1 CD1A gene_id:909|Hs108|chr1 ( 327) 315 72.6 5.3e-13 CCDS59006.1 DQB1 gene_id:3119|Hs108|chr6 ( 269) 310 71.5 9.2e-13 CCDS43451.1 DQB1 gene_id:3119|Hs108|chr6 ( 261) 306 70.7 1.6e-12 CCDS78128.1 DQB2 gene_id:3120|Hs108|chr6 ( 264) 305 70.5 1.8e-12 CCDS4751.1 DRB5 gene_id:3127|Hs108|chr6 ( 266) 276 64.7 1e-10 CCDS47409.1 DRB1 gene_id:3123|Hs108|chr6 ( 266) 276 64.7 1e-10 >>CCDS4578.1 HFE gene_id:3077|Hs108|chr6 (348 aa) initn: 2411 init1: 2411 opt: 2411 Z-score: 2605.1 bits: 490.5 E(32554): 8.7e-139 Smith-Waterman score: 2411; 100.0% identity (100.0% similar) in 348 aa overlap (1-348:1-348) 10 20 30 40 50 60 pF1KE5 MGPRARPALLLLMLLQTAVLQGRLLRSHSLHYLFMGASEQDLGLSLFEALGYVDDQLFVF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 MGPRARPALLLLMLLQTAVLQGRLLRSHSLHYLFMGASEQDLGLSLFEALGYVDDQLFVF 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 YDHESRRVEPRTPWVSSRISSQMWLQLSQSLKGWDHMFTVDFWTIMENHNHSKESHTLQV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 YDHESRRVEPRTPWVSSRISSQMWLQLSQSLKGWDHMFTVDFWTIMENHNHSKESHTLQV 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE5 ILGCEMQEDNSTEGYWKYGYDGQDHLEFCPDTLDWRAAEPRAWPTKLEWERHKIRARQNR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 ILGCEMQEDNSTEGYWKYGYDGQDHLEFCPDTLDWRAAEPRAWPTKLEWERHKIRARQNR 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE5 AYLERDCPAQLQQLLELGRGVLDQQVPPLVKVTHHVTSSVTTLRCRALNYYPQNITMKWL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 AYLERDCPAQLQQLLELGRGVLDQQVPPLVKVTHHVTSSVTTLRCRALNYYPQNITMKWL 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE5 KDKQPMDAKEFEPKDVLPNGDGTYQGWITLAVPPGEEQRYTCQVEHPGLDQPLIVIWEPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 KDKQPMDAKEFEPKDVLPNGDGTYQGWITLAVPPGEEQRYTCQVEHPGLDQPLIVIWEPS 250 260 270 280 290 300 310 320 330 340 pF1KE5 PSGTLVIGVISGIAVFVVILFIGILFIILRKRQGSRGAMGHYVLAERE :::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 PSGTLVIGVISGIAVFVVILFIGILFIILRKRQGSRGAMGHYVLAERE 310 320 330 340 >>CCDS75412.1 HFE gene_id:3077|Hs108|chr6 (337 aa) initn: 2324 init1: 2324 opt: 2324 Z-score: 2511.5 bits: 473.1 E(32554): 1.4e-133 Smith-Waterman score: 2324; 100.0% identity (100.0% similar) in 335 aa overlap (1-335:1-335) 10 20 30 40 50 60 pF1KE5 MGPRARPALLLLMLLQTAVLQGRLLRSHSLHYLFMGASEQDLGLSLFEALGYVDDQLFVF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS75 MGPRARPALLLLMLLQTAVLQGRLLRSHSLHYLFMGASEQDLGLSLFEALGYVDDQLFVF 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 YDHESRRVEPRTPWVSSRISSQMWLQLSQSLKGWDHMFTVDFWTIMENHNHSKESHTLQV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS75 YDHESRRVEPRTPWVSSRISSQMWLQLSQSLKGWDHMFTVDFWTIMENHNHSKESHTLQV 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE5 ILGCEMQEDNSTEGYWKYGYDGQDHLEFCPDTLDWRAAEPRAWPTKLEWERHKIRARQNR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS75 ILGCEMQEDNSTEGYWKYGYDGQDHLEFCPDTLDWRAAEPRAWPTKLEWERHKIRARQNR 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE5 AYLERDCPAQLQQLLELGRGVLDQQVPPLVKVTHHVTSSVTTLRCRALNYYPQNITMKWL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS75 AYLERDCPAQLQQLLELGRGVLDQQVPPLVKVTHHVTSSVTTLRCRALNYYPQNITMKWL 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE5 KDKQPMDAKEFEPKDVLPNGDGTYQGWITLAVPPGEEQRYTCQVEHPGLDQPLIVIWEPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS75 KDKQPMDAKEFEPKDVLPNGDGTYQGWITLAVPPGEEQRYTCQVEHPGLDQPLIVIWEPS 250 260 270 280 290 300 310 320 330 340 pF1KE5 PSGTLVIGVISGIAVFVVILFIGILFIILRKRQGSRGAMGHYVLAERE ::::::::::::::::::::::::::::::::::: CCDS75 PSGTLVIGVISGIAVFVVILFIGILFIILRKRQGSSF 310 320 330 >>CCDS47387.1 HFE gene_id:3077|Hs108|chr6 (325 aa) initn: 2241 init1: 2100 opt: 2100 Z-score: 2270.4 bits: 428.5 E(32554): 3.9e-120 Smith-Waterman score: 2198; 93.1% identity (93.1% similar) in 348 aa overlap (1-348:1-325) 10 20 30 40 50 60 pF1KE5 MGPRARPALLLLMLLQTAVLQGRLLRSHSLHYLFMGASEQDLGLSLFEALGYVDDQLFVF ::::::::::::::::::::::::: ::::::::::: CCDS47 MGPRARPALLLLMLLQTAVLQGRLL-----------------------PLGYVDDQLFVF 10 20 30 70 80 90 100 110 120 pF1KE5 YDHESRRVEPRTPWVSSRISSQMWLQLSQSLKGWDHMFTVDFWTIMENHNHSKESHTLQV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 YDHESRRVEPRTPWVSSRISSQMWLQLSQSLKGWDHMFTVDFWTIMENHNHSKESHTLQV 40 50 60 70 80 90 130 140 150 160 170 180 pF1KE5 ILGCEMQEDNSTEGYWKYGYDGQDHLEFCPDTLDWRAAEPRAWPTKLEWERHKIRARQNR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 ILGCEMQEDNSTEGYWKYGYDGQDHLEFCPDTLDWRAAEPRAWPTKLEWERHKIRARQNR 100 110 120 130 140 150 190 200 210 220 230 240 pF1KE5 AYLERDCPAQLQQLLELGRGVLDQQVPPLVKVTHHVTSSVTTLRCRALNYYPQNITMKWL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 AYLERDCPAQLQQLLELGRGVLDQQVPPLVKVTHHVTSSVTTLRCRALNYYPQNITMKWL 160 170 180 190 200 210 250 260 270 280 290 300 pF1KE5 KDKQPMDAKEFEPKDVLPNGDGTYQGWITLAVPPGEEQRYTCQVEHPGLDQPLIVIWEPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 KDKQPMDAKEFEPKDVLPNGDGTYQGWITLAVPPGEEQRYTCQVEHPGLDQPLIVIWEPS 220 230 240 250 260 270 310 320 330 340 pF1KE5 PSGTLVIGVISGIAVFVVILFIGILFIILRKRQGSRGAMGHYVLAERE :::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 PSGTLVIGVISGIAVFVVILFIGILFIILRKRQGSRGAMGHYVLAERE 280 290 300 310 320 >>CCDS4580.1 HFE gene_id:3077|Hs108|chr6 (260 aa) initn: 1636 init1: 1636 opt: 1636 Z-score: 1771.7 bits: 335.9 E(32554): 2.3e-92 Smith-Waterman score: 1636; 99.6% identity (100.0% similar) in 235 aa overlap (114-348:26-260) 90 100 110 120 130 140 pF1KE5 WLQLSQSLKGWDHMFTVDFWTIMENHNHSKESHTLQVILGCEMQEDNSTEGYWKYGYDGQ .::::::::::::::::::::::::::::: CCDS45 MGPRARPALLLLMLLQTAVLQGRLLQSHTLQVILGCEMQEDNSTEGYWKYGYDGQ 10 20 30 40 50 150 160 170 180 190 200 pF1KE5 DHLEFCPDTLDWRAAEPRAWPTKLEWERHKIRARQNRAYLERDCPAQLQQLLELGRGVLD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 DHLEFCPDTLDWRAAEPRAWPTKLEWERHKIRARQNRAYLERDCPAQLQQLLELGRGVLD 60 70 80 90 100 110 210 220 230 240 250 260 pF1KE5 QQVPPLVKVTHHVTSSVTTLRCRALNYYPQNITMKWLKDKQPMDAKEFEPKDVLPNGDGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 QQVPPLVKVTHHVTSSVTTLRCRALNYYPQNITMKWLKDKQPMDAKEFEPKDVLPNGDGT 120 130 140 150 160 170 270 280 290 300 310 320 pF1KE5 YQGWITLAVPPGEEQRYTCQVEHPGLDQPLIVIWEPSPSGTLVIGVISGIAVFVVILFIG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 YQGWITLAVPPGEEQRYTCQVEHPGLDQPLIVIWEPSPSGTLVIGVISGIAVFVVILFIG 180 190 200 210 220 230 330 340 pF1KE5 ILFIILRKRQGSRGAMGHYVLAERE ::::::::::::::::::::::::: CCDS45 ILFIILRKRQGSRGAMGHYVLAERE 240 250 260 >>CCDS54974.1 HFE gene_id:3077|Hs108|chr6 (334 aa) initn: 1468 init1: 1445 opt: 1466 Z-score: 1587.0 bits: 302.1 E(32554): 4.5e-82 Smith-Waterman score: 2282; 96.0% identity (96.0% similar) in 348 aa overlap (1-348:1-334) 10 20 30 40 50 60 pF1KE5 MGPRARPALLLLMLLQTAVLQGRLLRSHSLHYLFMGASEQDLGLSLFEALGYVDDQLFVF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS54 MGPRARPALLLLMLLQTAVLQGRLLRSHSLHYLFMGASEQDLGLSLFEALGYVDDQLFVF 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 YDHESRRVEPRTPWVSSRISSQMWLQLSQSLKGWDHMFTVDFWTIMENHNHSKESHTLQV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS54 YDHESRRVEPRTPWVSSRISSQMWLQLSQSLKGWDHMFTVDFWTIMENHNHSKESHTLQV 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE5 ILGCEMQEDNSTEGYWKYGYDGQDHLEFCPDTLDWRAAEPRAWPTKLEWERHKIRARQNR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS54 ILGCEMQEDNSTEGYWKYGYDGQDHLEFCPDTLDWRAAEPRAWPTKLEWERHKIRARQNR 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE5 AYLERDCPAQLQQLLELGRGVLDQQVPPLVKVTHHVTSSVTTLRCRALNYYPQNITMKWL :::::::::::::::::::::::::: :::::::::::::::::::: CCDS54 AYLERDCPAQLQQLLELGRGVLDQQV--------------TTLRCRALNYYPQNITMKWL 190 200 210 220 250 260 270 280 290 300 pF1KE5 KDKQPMDAKEFEPKDVLPNGDGTYQGWITLAVPPGEEQRYTCQVEHPGLDQPLIVIWEPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS54 KDKQPMDAKEFEPKDVLPNGDGTYQGWITLAVPPGEEQRYTCQVEHPGLDQPLIVIWEPS 230 240 250 260 270 280 310 320 330 340 pF1KE5 PSGTLVIGVISGIAVFVVILFIGILFIILRKRQGSRGAMGHYVLAERE :::::::::::::::::::::::::::::::::::::::::::::::: CCDS54 PSGTLVIGVISGIAVFVVILFIGILFIILRKRQGSRGAMGHYVLAERE 290 300 310 320 330 >>CCDS4579.1 HFE gene_id:3077|Hs108|chr6 (256 aa) initn: 976 init1: 976 opt: 985 Z-score: 1070.3 bits: 206.1 E(32554): 2.7e-53 Smith-Waterman score: 1551; 73.6% identity (73.6% similar) in 348 aa overlap (1-348:1-256) 10 20 30 40 50 60 pF1KE5 MGPRARPALLLLMLLQTAVLQGRLLRSHSLHYLFMGASEQDLGLSLFEALGYVDDQLFVF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 MGPRARPALLLLMLLQTAVLQGRLLRSHSLHYLFMGASEQDLGLSLFEALGYVDDQLFVF 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 YDHESRRVEPRTPWVSSRISSQMWLQLSQSLKGWDHMFTVDFWTIMENHNHSKESHTLQV ::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 YDHESRRVEPRTPWVSSRISSQMWLQLSQSLKGWDHMFTVDFWTIMENHNHSK------- 70 80 90 100 110 130 140 150 160 170 180 pF1KE5 ILGCEMQEDNSTEGYWKYGYDGQDHLEFCPDTLDWRAAEPRAWPTKLEWERHKIRARQNR CCDS45 ------------------------------------------------------------ 190 200 210 220 230 240 pF1KE5 AYLERDCPAQLQQLLELGRGVLDQQVPPLVKVTHHVTSSVTTLRCRALNYYPQNITMKWL ::::::::::::::::::::::::::::::::::: CCDS45 -------------------------VPPLVKVTHHVTSSVTTLRCRALNYYPQNITMKWL 120 130 140 250 260 270 280 290 300 pF1KE5 KDKQPMDAKEFEPKDVLPNGDGTYQGWITLAVPPGEEQRYTCQVEHPGLDQPLIVIWEPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 KDKQPMDAKEFEPKDVLPNGDGTYQGWITLAVPPGEEQRYTCQVEHPGLDQPLIVIWEPS 150 160 170 180 190 200 310 320 330 340 pF1KE5 PSGTLVIGVISGIAVFVVILFIGILFIILRKRQGSRGAMGHYVLAERE :::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 PSGTLVIGVISGIAVFVVILFIGILFIILRKRQGSRGAMGHYVLAERE 210 220 230 240 250 >>CCDS4581.1 HFE gene_id:3077|Hs108|chr6 (168 aa) initn: 1111 init1: 970 opt: 978 Z-score: 1065.3 bits: 204.5 E(32554): 5.1e-53 Smith-Waterman score: 978; 90.4% identity (93.4% similar) in 166 aa overlap (185-348:4-168) 160 170 180 190 200 210 pF1KE5 WRAAEPRAWPTKLEWERHKIRARQNRAYLERDCPAQLQQLLELGRGVLDQQV--PPLVKV : :: : .: : .::. .. :::::: CCDS45 MGPRARPALLLLML-LQTAVLQGRLLLPPLVKV 10 20 30 220 230 240 250 260 270 pF1KE5 THHVTSSVTTLRCRALNYYPQNITMKWLKDKQPMDAKEFEPKDVLPNGDGTYQGWITLAV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 THHVTSSVTTLRCRALNYYPQNITMKWLKDKQPMDAKEFEPKDVLPNGDGTYQGWITLAV 40 50 60 70 80 90 280 290 300 310 320 330 pF1KE5 PPGEEQRYTCQVEHPGLDQPLIVIWEPSPSGTLVIGVISGIAVFVVILFIGILFIILRKR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 PPGEEQRYTCQVEHPGLDQPLIVIWEPSPSGTLVIGVISGIAVFVVILFIGILFIILRKR 100 110 120 130 140 150 340 pF1KE5 QGSRGAMGHYVLAERE :::::::::::::::: CCDS45 QGSRGAMGHYVLAERE 160 >>CCDS54975.1 HFE gene_id:3077|Hs108|chr6 (246 aa) initn: 1058 init1: 883 opt: 907 Z-score: 986.5 bits: 190.5 E(32554): 1.3e-48 Smith-Waterman score: 1507; 93.6% identity (94.0% similar) in 235 aa overlap (114-348:26-246) 90 100 110 120 130 140 pF1KE5 WLQLSQSLKGWDHMFTVDFWTIMENHNHSKESHTLQVILGCEMQEDNSTEGYWKYGYDGQ .::::::::::::::::::::::::::::: CCDS54 MGPRARPALLLLMLLQTAVLQGRLLQSHTLQVILGCEMQEDNSTEGYWKYGYDGQ 10 20 30 40 50 150 160 170 180 190 200 pF1KE5 DHLEFCPDTLDWRAAEPRAWPTKLEWERHKIRARQNRAYLERDCPAQLQQLLELGRGVLD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS54 DHLEFCPDTLDWRAAEPRAWPTKLEWERHKIRARQNRAYLERDCPAQLQQLLELGRGVLD 60 70 80 90 100 110 210 220 230 240 250 260 pF1KE5 QQVPPLVKVTHHVTSSVTTLRCRALNYYPQNITMKWLKDKQPMDAKEFEPKDVLPNGDGT ::: ::::::::::::::::::::::::::::::::::::::::::: CCDS54 QQV--------------TTLRCRALNYYPQNITMKWLKDKQPMDAKEFEPKDVLPNGDGT 120 130 140 150 160 270 280 290 300 310 320 pF1KE5 YQGWITLAVPPGEEQRYTCQVEHPGLDQPLIVIWEPSPSGTLVIGVISGIAVFVVILFIG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS54 YQGWITLAVPPGEEQRYTCQVEHPGLDQPLIVIWEPSPSGTLVIGVISGIAVFVVILFIG 170 180 190 200 210 220 330 340 pF1KE5 ILFIILRKRQGSRGAMGHYVLAERE ::::::::::::::::::::::::: CCDS54 ILFIILRKRQGSRGAMGHYVLAERE 230 240 >>CCDS47386.1 HFE gene_id:3077|Hs108|chr6 (242 aa) initn: 888 init1: 888 opt: 894 Z-score: 972.6 bits: 187.9 E(32554): 7.5e-48 Smith-Waterman score: 1432; 69.5% identity (69.5% similar) in 348 aa overlap (1-348:1-242) 10 20 30 40 50 60 pF1KE5 MGPRARPALLLLMLLQTAVLQGRLLRSHSLHYLFMGASEQDLGLSLFEALGYVDDQLFVF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 MGPRARPALLLLMLLQTAVLQGRLLRSHSLHYLFMGASEQDLGLSLFEALGYVDDQLFVF 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 YDHESRRVEPRTPWVSSRISSQMWLQLSQSLKGWDHMFTVDFWTIMENHNHSKESHTLQV ::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 YDHESRRVEPRTPWVSSRISSQMWLQLSQSLKGWDHMFTVDFWTIMENHNHSK------- 70 80 90 100 110 130 140 150 160 170 180 pF1KE5 ILGCEMQEDNSTEGYWKYGYDGQDHLEFCPDTLDWRAAEPRAWPTKLEWERHKIRARQNR CCDS47 ------------------------------------------------------------ 190 200 210 220 230 240 pF1KE5 AYLERDCPAQLQQLLELGRGVLDQQVPPLVKVTHHVTSSVTTLRCRALNYYPQNITMKWL ::::::::::::::::::::: CCDS47 ---------------------------------------VTTLRCRALNYYPQNITMKWL 120 130 250 260 270 280 290 300 pF1KE5 KDKQPMDAKEFEPKDVLPNGDGTYQGWITLAVPPGEEQRYTCQVEHPGLDQPLIVIWEPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 KDKQPMDAKEFEPKDVLPNGDGTYQGWITLAVPPGEEQRYTCQVEHPGLDQPLIVIWEPS 140 150 160 170 180 190 310 320 330 340 pF1KE5 PSGTLVIGVISGIAVFVVILFIGILFIILRKRQGSRGAMGHYVLAERE :::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 PSGTLVIGVISGIAVFVVILFIGILFIILRKRQGSRGAMGHYVLAERE 200 210 220 230 240 >>CCDS1342.1 MR1 gene_id:3140|Hs108|chr1 (341 aa) initn: 631 init1: 398 opt: 789 Z-score: 857.4 bits: 167.1 E(32554): 2e-41 Smith-Waterman score: 789; 37.7% identity (69.8% similar) in 324 aa overlap (10-332:7-326) 10 20 30 40 50 60 pF1KE5 MGPRARPALLLLMLLQTAVLQGRLLRSHSLHYLFMGASEQDLGLSLFEALGYVDDQLFVF .:: :. . ... :.:::.:. .:.:. :. : ..::::.. .. CCDS13 MGELMAFLLPLIIVLMVKHSDSRTHSLRYFRLGVSDPIHGVPEFISVGYVDSHPITT 10 20 30 40 50 70 80 90 100 110 120 pF1KE5 YDHESRRVEPRTPWVSSRISSQMWLQLSQSLKGWDHMFTVDFWTIMENHNHSKESHTLQV :: .:. :::.::.. .. . : . .: :.::..:: :.. .....::: ::: : CCDS13 YDSVTRQKEPRAPWMAENLAPDHWERYTQLLRGWQQMFKVELKRLQRHYNHSG-SHTYQR 60 70 80 90 100 110 130 140 150 160 170 180 pF1KE5 ILGCEMQEDNSTEGYWKYGYDGQDHLEFCPDTLDWRAAEPRAWPTKLEWERHKIRARQNR ..:::. ::.:: :. .:.::::: : : :::.: :.. : : :: .. . .. CCDS13 MIGCELLEDGSTTGFLQYAYDGQDFLIFNKDTLSWLAVDNVAHTIKQAWEANQHELLYQK 120 130 140 150 160 170 190 200 210 220 230 pF1KE5 AYLERDCPAQLQQLLELGRGVLDQQVPPLVKVTHHVT-SSVTTLRCRALNYYPQNITMKW .::..: : :...:: :. .:.. ::::.:... : .::.: :.: ..:: .: : : CCDS13 NWLEEECIAWLKRFLEYGKDTLQRTEPPLVRVNRKETFPGVTALFCKAHGFYPPEIYMTW 180 190 200 210 220 230 240 250 260 270 280 290 pF1KE5 LKDKQPMDAKEFEPKDVLPNGDGTYQGWITLAVPPGEEQRYTCQVEHPGLDQPLIVIWEP .:. . . ..:.. :.::.::::::.: .. . : . :.:.::: :. . : : : CCDS13 MKNGEEI-VQEIDYGDILPSGDGTYQAWASIELDPQSSNLYSCHVEHCGVHMVLQVPQE- 240 250 260 270 280 290 300 310 320 330 340 pF1KE5 SPSGTLVIGVISGIAVFVVILFIGILFIILRKRQGSRGAMGHYVLAERE : . ::. ..:: :.:..: :. .. :.: CCDS13 SETIPLVMKAVSGSIVLVIVL-AGVGVLVWRRRPREQNGAIYLPTPDR 300 310 320 330 340 348 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 00:42:13 2016 done: Tue Nov 8 00:42:14 2016 Total Scan time: 1.780 Total Display time: 0.040 Function used was FASTA [36.3.4 Apr, 2011]