FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE4583, 840 aa 1>>>pF1KE4583 840 - 840 aa - 840 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.6804+/-0.00049; mu= 18.0250+/- 0.030 mean_var=71.2118+/-14.624, 0's: 0 Z-trim(109.1): 83 B-trim: 73 in 1/49 Lambda= 0.151984 statistics sampled from 17203 (17286) to 17203 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.552), E-opt: 0.2 (0.203), width: 16 Scan time: 8.730 The best scores are: opt bits E(85289) NP_001494 (OMIM: 602515) phosphatidylinositol-glyc ( 840) 5685 1256.8 0 XP_016866242 (OMIM: 602515) PREDICTED: phosphatidy ( 850) 5660 1251.3 0 XP_016866243 (OMIM: 602515) PREDICTED: phosphatidy ( 677) 4398 974.5 0 XP_011512811 (OMIM: 602515) PREDICTED: phosphatidy ( 518) 3456 767.9 0 NP_002195 (OMIM: 605025,614748) integrin alpha-3 p (1051) 237 62.2 1.4e-08 XP_011544151 (OMIM: 153370) PREDICTED: integrin al (1074) 237 62.2 1.4e-08 NP_001107852 (OMIM: 153370) integrin alpha-L isofo (1086) 237 62.2 1.4e-08 XP_006721107 (OMIM: 153370) PREDICTED: integrin al (1087) 237 62.2 1.4e-08 XP_005255370 (OMIM: 153370) PREDICTED: integrin al (1169) 237 62.3 1.5e-08 NP_002200 (OMIM: 153370) integrin alpha-L isoform (1170) 237 62.3 1.5e-08 XP_005268907 (OMIM: 600536,613204) PREDICTED: inte ( 979) 225 59.6 8.1e-08 XP_005268905 (OMIM: 600536,613204) PREDICTED: inte (1023) 225 59.6 8.4e-08 XP_005268906 (OMIM: 600536,613204) PREDICTED: inte (1023) 225 59.6 8.4e-08 XP_005268903 (OMIM: 600536,613204) PREDICTED: inte (1024) 225 59.6 8.4e-08 NP_001138469 (OMIM: 600536,613204) integrin alpha- (1044) 225 59.6 8.5e-08 XP_016874754 (OMIM: 600536,613204) PREDICTED: inte (1051) 225 59.6 8.6e-08 XP_005268901 (OMIM: 600536,613204) PREDICTED: inte (1068) 225 59.6 8.7e-08 XP_005268899 (OMIM: 600536,613204) PREDICTED: inte (1131) 225 59.6 9.2e-08 NP_002197 (OMIM: 600536,613204) integrin alpha-7 i (1137) 225 59.6 9.2e-08 NP_001138468 (OMIM: 600536,613204) integrin alpha- (1141) 225 59.6 9.2e-08 XP_005268898 (OMIM: 600536,613204) PREDICTED: inte (1162) 225 59.6 9.4e-08 XP_005268897 (OMIM: 600536,613204) PREDICTED: inte (1175) 225 59.6 9.5e-08 XP_005268896 (OMIM: 600536,613204) PREDICTED: inte (1181) 225 59.6 9.5e-08 XP_011523052 (OMIM: 187800,273800,607759) PREDICTE (1000) 219 58.3 2e-07 XP_011523051 (OMIM: 187800,273800,607759) PREDICTE (1005) 219 58.3 2.1e-07 NP_000410 (OMIM: 187800,273800,607759) integrin al (1039) 219 58.3 2.1e-07 XP_006721108 (OMIM: 120980,609939) PREDICTED: inte ( 613) 203 54.7 1.5e-06 NP_000623 (OMIM: 120980,609939) integrin alpha-M i (1152) 203 54.8 2.6e-06 XP_016878705 (OMIM: 120980,609939) PREDICTED: inte ( 917) 198 53.7 4.6e-06 XP_011544152 (OMIM: 120980,609939) PREDICTED: inte (1091) 198 53.7 5.4e-06 NP_001139280 (OMIM: 120980,609939) integrin alpha- (1153) 198 53.7 5.6e-06 NP_001138471 (OMIM: 193210) integrin alpha-V isofo (1002) 178 49.3 0.0001 NP_001138472 (OMIM: 193210) integrin alpha-V isofo (1012) 178 49.3 0.00011 NP_002201 (OMIM: 193210) integrin alpha-V isoform (1048) 178 49.3 0.00011 XP_016859497 (OMIM: 147556,226730) PREDICTED: inte ( 944) 174 48.4 0.00018 NP_001303235 (OMIM: 147556,226730) integrin alpha- ( 954) 174 48.4 0.00018 XP_016859496 (OMIM: 147556,226730) PREDICTED: inte ( 959) 174 48.4 0.00018 XP_016859495 (OMIM: 147556,226730) PREDICTED: inte ( 962) 174 48.4 0.00019 XP_016859494 (OMIM: 147556,226730) PREDICTED: inte ( 977) 174 48.4 0.00019 XP_006712574 (OMIM: 147556,226730) PREDICTED: inte (1058) 174 48.4 0.0002 NP_000201 (OMIM: 147556,226730) integrin alpha-6 i (1073) 174 48.4 0.0002 XP_006712573 (OMIM: 147556,226730) PREDICTED: inte (1076) 174 48.4 0.0002 NP_001073286 (OMIM: 147556,226730) integrin alpha- (1091) 174 48.4 0.00021 NP_002198 (OMIM: 603963) integrin alpha-9 precurso (1035) 172 48.0 0.00027 NP_000876 (OMIM: 192975) integrin alpha-4 isoform (1032) 170 47.5 0.00036 XP_016880076 (OMIM: 604682) PREDICTED: integrin al ( 848) 163 46.0 0.00088 XP_005254285 (OMIM: 604789) PREDICTED: integrin al (1086) 164 46.2 0.00094 XP_011519665 (OMIM: 604789) PREDICTED: integrin al (1119) 164 46.2 0.00096 NP_001004439 (OMIM: 604789) integrin alpha-11 prec (1188) 164 46.3 0.001 NP_001278423 (OMIM: 191830,604063) integrin alpha- (1048) 163 46.0 0.0011 >>NP_001494 (OMIM: 602515) phosphatidylinositol-glycan-s (840 aa) initn: 5685 init1: 5685 opt: 5685 Z-score: 6732.6 bits: 1256.8 E(85289): 0 Smith-Waterman score: 5685; 100.0% identity (100.0% similar) in 840 aa overlap (1-840:1-840) 10 20 30 40 50 60 pF1KE4 MSAFRLWPGLLIMLGSLCHRGSPCGLSTHVEIGHRALEFLQLHNGRVNYRELLLEHQDAY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MSAFRLWPGLLIMLGSLCHRGSPCGLSTHVEIGHRALEFLQLHNGRVNYRELLLEHQDAY 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE4 QAGIVFPDCFYPSICKGGKFHDVSESTHWTPFLNASVHYIRENYPLPWEKDTEKLVAFLF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 QAGIVFPDCFYPSICKGGKFHDVSESTHWTPFLNASVHYIRENYPLPWEKDTEKLVAFLF 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE4 GITSHMAADVSWHSLGLEQGFLRTMGAIDFHGSYSEAHSAGDFGGDVLSQFEFNFNYLAR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 GITSHMAADVSWHSLGLEQGFLRTMGAIDFHGSYSEAHSAGDFGGDVLSQFEFNFNYLAR 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE4 RWYVPVKDLLGIYEKLYGRKVITENVIVDCSHIQFLEMYGEMLAVSKLYPTYSTKSPFLV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 RWYVPVKDLLGIYEKLYGRKVITENVIVDCSHIQFLEMYGEMLAVSKLYPTYSTKSPFLV 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE4 EQFQEYFLGGLDDMAFWSTNIYHLTSFMLENGTSDCNLPENPLFIACGGQQNHTQGSKMQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 EQFQEYFLGGLDDMAFWSTNIYHLTSFMLENGTSDCNLPENPLFIACGGQQNHTQGSKMQ 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE4 KNDFHRNLTTSLTESVDRNINYTERGVFFSVNSWTPDSMSFIYKALERNIRTMFIGGSQL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 KNDFHRNLTTSLTESVDRNINYTERGVFFSVNSWTPDSMSFIYKALERNIRTMFIGGSQL 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE4 SQKHVSSPLASYFLSFPYARLGWAMTSADLNQDGHGDLVVGAPGYSRPGHIHIGRVYLIY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 SQKHVSSPLASYFLSFPYARLGWAMTSADLNQDGHGDLVVGAPGYSRPGHIHIGRVYLIY 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE4 GNDLGLPPVDLDLDKEAHRILEGFQPSGRFGSALAVLDFNVDGVPDLAVGAPSVGSEQLT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 GNDLGLPPVDLDLDKEAHRILEGFQPSGRFGSALAVLDFNVDGVPDLAVGAPSVGSEQLT 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE4 YKGAVYVYFGSKQGGMSSSPNITISCQDIYCNLGWTLLAADVNGDSEPDLVIGSPFAPGG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 YKGAVYVYFGSKQGGMSSSPNITISCQDIYCNLGWTLLAADVNGDSEPDLVIGSPFAPGG 490 500 510 520 530 540 550 560 570 580 590 600 pF1KE4 GKQKGIVAAFYSGPSLSDKEKLNVEAANWTVRGEEDFSWFGYSLHGVTVDNRTLLLVGSP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 GKQKGIVAAFYSGPSLSDKEKLNVEAANWTVRGEEDFSWFGYSLHGVTVDNRTLLLVGSP 550 560 570 580 590 600 610 620 630 640 650 660 pF1KE4 TWKNASRLGHLLHIRDEKKSLGRVYGYFPPNGQSWFTISGDKAMGKLGTSLSSGHVLMNG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 TWKNASRLGHLLHIRDEKKSLGRVYGYFPPNGQSWFTISGDKAMGKLGTSLSSGHVLMNG 610 620 630 640 650 660 670 680 690 700 710 720 pF1KE4 TLKQVLLVGAPTYDDVSKVAFLTVTLHQGGATRMYALTSDAQPLLLSTFSGDRRFSRFGG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 TLKQVLLVGAPTYDDVSKVAFLTVTLHQGGATRMYALTSDAQPLLLSTFSGDRRFSRFGG 670 680 690 700 710 720 730 740 750 760 770 780 pF1KE4 VLHLSDLDDDGLDEIIMAAPLRIADVTSGLIGGEDGRVYVYNGKETTLGDMTGKCKSWIT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 VLHLSDLDDDGLDEIIMAAPLRIADVTSGLIGGEDGRVYVYNGKETTLGDMTGKCKSWIT 730 740 750 760 770 780 790 800 810 820 830 840 pF1KE4 PCPEEKAQYVLISPEASSRFGSSLITVRSKAKNQVVIAAGRSSLGARLSGALHVYSLGSD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 PCPEEKAQYVLISPEASSRFGSSLITVRSKAKNQVVIAAGRSSLGARLSGALHVYSLGSD 790 800 810 820 830 840 >>XP_016866242 (OMIM: 602515) PREDICTED: phosphatidylino (850 aa) initn: 5660 init1: 5660 opt: 5660 Z-score: 6702.9 bits: 1251.3 E(85289): 0 Smith-Waterman score: 5660; 100.0% identity (100.0% similar) in 836 aa overlap (5-840:15-850) 10 20 30 40 50 pF1KE4 MSAFRLWPGLLIMLGSLCHRGSPCGLSTHVEIGHRALEFLQLHNGRVNYR :::::::::::::::::::::::::::::::::::::::::::::: XP_016 MQVAMARATTATGNRLWPGLLIMLGSLCHRGSPCGLSTHVEIGHRALEFLQLHNGRVNYR 10 20 30 40 50 60 60 70 80 90 100 110 pF1KE4 ELLLEHQDAYQAGIVFPDCFYPSICKGGKFHDVSESTHWTPFLNASVHYIRENYPLPWEK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 ELLLEHQDAYQAGIVFPDCFYPSICKGGKFHDVSESTHWTPFLNASVHYIRENYPLPWEK 70 80 90 100 110 120 120 130 140 150 160 170 pF1KE4 DTEKLVAFLFGITSHMAADVSWHSLGLEQGFLRTMGAIDFHGSYSEAHSAGDFGGDVLSQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 DTEKLVAFLFGITSHMAADVSWHSLGLEQGFLRTMGAIDFHGSYSEAHSAGDFGGDVLSQ 130 140 150 160 170 180 180 190 200 210 220 230 pF1KE4 FEFNFNYLARRWYVPVKDLLGIYEKLYGRKVITENVIVDCSHIQFLEMYGEMLAVSKLYP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 FEFNFNYLARRWYVPVKDLLGIYEKLYGRKVITENVIVDCSHIQFLEMYGEMLAVSKLYP 190 200 210 220 230 240 240 250 260 270 280 290 pF1KE4 TYSTKSPFLVEQFQEYFLGGLDDMAFWSTNIYHLTSFMLENGTSDCNLPENPLFIACGGQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 TYSTKSPFLVEQFQEYFLGGLDDMAFWSTNIYHLTSFMLENGTSDCNLPENPLFIACGGQ 250 260 270 280 290 300 300 310 320 330 340 350 pF1KE4 QNHTQGSKMQKNDFHRNLTTSLTESVDRNINYTERGVFFSVNSWTPDSMSFIYKALERNI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 QNHTQGSKMQKNDFHRNLTTSLTESVDRNINYTERGVFFSVNSWTPDSMSFIYKALERNI 310 320 330 340 350 360 360 370 380 390 400 410 pF1KE4 RTMFIGGSQLSQKHVSSPLASYFLSFPYARLGWAMTSADLNQDGHGDLVVGAPGYSRPGH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 RTMFIGGSQLSQKHVSSPLASYFLSFPYARLGWAMTSADLNQDGHGDLVVGAPGYSRPGH 370 380 390 400 410 420 420 430 440 450 460 470 pF1KE4 IHIGRVYLIYGNDLGLPPVDLDLDKEAHRILEGFQPSGRFGSALAVLDFNVDGVPDLAVG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 IHIGRVYLIYGNDLGLPPVDLDLDKEAHRILEGFQPSGRFGSALAVLDFNVDGVPDLAVG 430 440 450 460 470 480 480 490 500 510 520 530 pF1KE4 APSVGSEQLTYKGAVYVYFGSKQGGMSSSPNITISCQDIYCNLGWTLLAADVNGDSEPDL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 APSVGSEQLTYKGAVYVYFGSKQGGMSSSPNITISCQDIYCNLGWTLLAADVNGDSEPDL 490 500 510 520 530 540 540 550 560 570 580 590 pF1KE4 VIGSPFAPGGGKQKGIVAAFYSGPSLSDKEKLNVEAANWTVRGEEDFSWFGYSLHGVTVD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 VIGSPFAPGGGKQKGIVAAFYSGPSLSDKEKLNVEAANWTVRGEEDFSWFGYSLHGVTVD 550 560 570 580 590 600 600 610 620 630 640 650 pF1KE4 NRTLLLVGSPTWKNASRLGHLLHIRDEKKSLGRVYGYFPPNGQSWFTISGDKAMGKLGTS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 NRTLLLVGSPTWKNASRLGHLLHIRDEKKSLGRVYGYFPPNGQSWFTISGDKAMGKLGTS 610 620 630 640 650 660 660 670 680 690 700 710 pF1KE4 LSSGHVLMNGTLKQVLLVGAPTYDDVSKVAFLTVTLHQGGATRMYALTSDAQPLLLSTFS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 LSSGHVLMNGTLKQVLLVGAPTYDDVSKVAFLTVTLHQGGATRMYALTSDAQPLLLSTFS 670 680 690 700 710 720 720 730 740 750 760 770 pF1KE4 GDRRFSRFGGVLHLSDLDDDGLDEIIMAAPLRIADVTSGLIGGEDGRVYVYNGKETTLGD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 GDRRFSRFGGVLHLSDLDDDGLDEIIMAAPLRIADVTSGLIGGEDGRVYVYNGKETTLGD 730 740 750 760 770 780 780 790 800 810 820 830 pF1KE4 MTGKCKSWITPCPEEKAQYVLISPEASSRFGSSLITVRSKAKNQVVIAAGRSSLGARLSG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 MTGKCKSWITPCPEEKAQYVLISPEASSRFGSSLITVRSKAKNQVVIAAGRSSLGARLSG 790 800 810 820 830 840 840 pF1KE4 ALHVYSLGSD :::::::::: XP_016 ALHVYSLGSD 850 >>XP_016866243 (OMIM: 602515) PREDICTED: phosphatidylino (677 aa) initn: 4397 init1: 4397 opt: 4398 Z-score: 5208.9 bits: 974.5 E(85289): 0 Smith-Waterman score: 4398; 99.7% identity (99.7% similar) in 661 aa overlap (182-840:17-677) 160 170 180 190 200 pF1KE4 GSYSEAHSAGDFGGDVLSQFEFNFNYLARRW--YVPVKDLLGIYEKLYGRKVITENVIVD : ::::::::::::::::::::::::::: XP_016 MSAGIVWALNKDSLGPWELYVPVKDLLGIYEKLYGRKVITENVIVD 10 20 30 40 210 220 230 240 250 260 pF1KE4 CSHIQFLEMYGEMLAVSKLYPTYSTKSPFLVEQFQEYFLGGLDDMAFWSTNIYHLTSFML :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 CSHIQFLEMYGEMLAVSKLYPTYSTKSPFLVEQFQEYFLGGLDDMAFWSTNIYHLTSFML 50 60 70 80 90 100 270 280 290 300 310 320 pF1KE4 ENGTSDCNLPENPLFIACGGQQNHTQGSKMQKNDFHRNLTTSLTESVDRNINYTERGVFF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 ENGTSDCNLPENPLFIACGGQQNHTQGSKMQKNDFHRNLTTSLTESVDRNINYTERGVFF 110 120 130 140 150 160 330 340 350 360 370 380 pF1KE4 SVNSWTPDSMSFIYKALERNIRTMFIGGSQLSQKHVSSPLASYFLSFPYARLGWAMTSAD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 SVNSWTPDSMSFIYKALERNIRTMFIGGSQLSQKHVSSPLASYFLSFPYARLGWAMTSAD 170 180 190 200 210 220 390 400 410 420 430 440 pF1KE4 LNQDGHGDLVVGAPGYSRPGHIHIGRVYLIYGNDLGLPPVDLDLDKEAHRILEGFQPSGR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 LNQDGHGDLVVGAPGYSRPGHIHIGRVYLIYGNDLGLPPVDLDLDKEAHRILEGFQPSGR 230 240 250 260 270 280 450 460 470 480 490 500 pF1KE4 FGSALAVLDFNVDGVPDLAVGAPSVGSEQLTYKGAVYVYFGSKQGGMSSSPNITISCQDI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 FGSALAVLDFNVDGVPDLAVGAPSVGSEQLTYKGAVYVYFGSKQGGMSSSPNITISCQDI 290 300 310 320 330 340 510 520 530 540 550 560 pF1KE4 YCNLGWTLLAADVNGDSEPDLVIGSPFAPGGGKQKGIVAAFYSGPSLSDKEKLNVEAANW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 YCNLGWTLLAADVNGDSEPDLVIGSPFAPGGGKQKGIVAAFYSGPSLSDKEKLNVEAANW 350 360 370 380 390 400 570 580 590 600 610 620 pF1KE4 TVRGEEDFSWFGYSLHGVTVDNRTLLLVGSPTWKNASRLGHLLHIRDEKKSLGRVYGYFP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 TVRGEEDFSWFGYSLHGVTVDNRTLLLVGSPTWKNASRLGHLLHIRDEKKSLGRVYGYFP 410 420 430 440 450 460 630 640 650 660 670 680 pF1KE4 PNGQSWFTISGDKAMGKLGTSLSSGHVLMNGTLKQVLLVGAPTYDDVSKVAFLTVTLHQG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 PNGQSWFTISGDKAMGKLGTSLSSGHVLMNGTLKQVLLVGAPTYDDVSKVAFLTVTLHQG 470 480 490 500 510 520 690 700 710 720 730 740 pF1KE4 GATRMYALTSDAQPLLLSTFSGDRRFSRFGGVLHLSDLDDDGLDEIIMAAPLRIADVTSG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 GATRMYALTSDAQPLLLSTFSGDRRFSRFGGVLHLSDLDDDGLDEIIMAAPLRIADVTSG 530 540 550 560 570 580 750 760 770 780 790 800 pF1KE4 LIGGEDGRVYVYNGKETTLGDMTGKCKSWITPCPEEKAQYVLISPEASSRFGSSLITVRS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 LIGGEDGRVYVYNGKETTLGDMTGKCKSWITPCPEEKAQYVLISPEASSRFGSSLITVRS 590 600 610 620 630 640 810 820 830 840 pF1KE4 KAKNQVVIAAGRSSLGARLSGALHVYSLGSD ::::::::::::::::::::::::::::::: XP_016 KAKNQVVIAAGRSSLGARLSGALHVYSLGSD 650 660 670 >>XP_011512811 (OMIM: 602515) PREDICTED: phosphatidylino (518 aa) initn: 3456 init1: 3456 opt: 3456 Z-score: 4094.4 bits: 767.9 E(85289): 0 Smith-Waterman score: 3456; 100.0% identity (100.0% similar) in 503 aa overlap (5-507:15-517) 10 20 30 40 50 pF1KE4 MSAFRLWPGLLIMLGSLCHRGSPCGLSTHVEIGHRALEFLQLHNGRVNYR :::::::::::::::::::::::::::::::::::::::::::::: XP_011 MQVAMARATTATGNRLWPGLLIMLGSLCHRGSPCGLSTHVEIGHRALEFLQLHNGRVNYR 10 20 30 40 50 60 60 70 80 90 100 110 pF1KE4 ELLLEHQDAYQAGIVFPDCFYPSICKGGKFHDVSESTHWTPFLNASVHYIRENYPLPWEK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 ELLLEHQDAYQAGIVFPDCFYPSICKGGKFHDVSESTHWTPFLNASVHYIRENYPLPWEK 70 80 90 100 110 120 120 130 140 150 160 170 pF1KE4 DTEKLVAFLFGITSHMAADVSWHSLGLEQGFLRTMGAIDFHGSYSEAHSAGDFGGDVLSQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 DTEKLVAFLFGITSHMAADVSWHSLGLEQGFLRTMGAIDFHGSYSEAHSAGDFGGDVLSQ 130 140 150 160 170 180 180 190 200 210 220 230 pF1KE4 FEFNFNYLARRWYVPVKDLLGIYEKLYGRKVITENVIVDCSHIQFLEMYGEMLAVSKLYP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 FEFNFNYLARRWYVPVKDLLGIYEKLYGRKVITENVIVDCSHIQFLEMYGEMLAVSKLYP 190 200 210 220 230 240 240 250 260 270 280 290 pF1KE4 TYSTKSPFLVEQFQEYFLGGLDDMAFWSTNIYHLTSFMLENGTSDCNLPENPLFIACGGQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 TYSTKSPFLVEQFQEYFLGGLDDMAFWSTNIYHLTSFMLENGTSDCNLPENPLFIACGGQ 250 260 270 280 290 300 300 310 320 330 340 350 pF1KE4 QNHTQGSKMQKNDFHRNLTTSLTESVDRNINYTERGVFFSVNSWTPDSMSFIYKALERNI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 QNHTQGSKMQKNDFHRNLTTSLTESVDRNINYTERGVFFSVNSWTPDSMSFIYKALERNI 310 320 330 340 350 360 360 370 380 390 400 410 pF1KE4 RTMFIGGSQLSQKHVSSPLASYFLSFPYARLGWAMTSADLNQDGHGDLVVGAPGYSRPGH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 RTMFIGGSQLSQKHVSSPLASYFLSFPYARLGWAMTSADLNQDGHGDLVVGAPGYSRPGH 370 380 390 400 410 420 420 430 440 450 460 470 pF1KE4 IHIGRVYLIYGNDLGLPPVDLDLDKEAHRILEGFQPSGRFGSALAVLDFNVDGVPDLAVG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 IHIGRVYLIYGNDLGLPPVDLDLDKEAHRILEGFQPSGRFGSALAVLDFNVDGVPDLAVG 430 440 450 460 470 480 480 490 500 510 520 530 pF1KE4 APSVGSEQLTYKGAVYVYFGSKQGGMSSSPNITISCQDIYCNLGWTLLAADVNGDSEPDL ::::::::::::::::::::::::::::::::::::: XP_011 APSVGSEQLTYKGAVYVYFGSKQGGMSSSPNITISCQM 490 500 510 540 550 560 570 580 590 pF1KE4 VIGSPFAPGGGKQKGIVAAFYSGPSLSDKEKLNVEAANWTVRGEEDFSWFGYSLHGVTVD >>NP_002195 (OMIM: 605025,614748) integrin alpha-3 prepr (1051 aa) initn: 178 init1: 177 opt: 237 Z-score: 275.1 bits: 62.2 E(85289): 1.4e-08 Smith-Waterman score: 244; 28.7% identity (58.1% similar) in 296 aa overlap (258-534:186-452) 230 240 250 260 270 280 pF1KE4 LYPTYSTKSPFLVEQFQEYFLGGLDDMAFWSTNIYHLTSFMLENGTSDCNLPENPLFIAC ..: .: . : . ::: .. .: .... NP_002 RRMVGKCYVRGNDLELDSSDDWQTYHNEMCNSNTDYLETGMCQLGTSG-GFTQNTVYFGA 160 170 180 190 200 210 290 300 310 320 330 340 pF1KE4 GGQQNHTQGSKM-QKNDFHRNLTT-SLTESVDRNINYTERGVFFSVNSWT--PDSMSFIY : : .: : :.... .:. : . :.. : : ..:.:. : ..... NP_002 PGAYNWKGNSYMIQRKEW--DLSEYSYKDPEDQGNLYI--GYTMQVGSFILHPKNITIVT 220 230 240 250 260 270 350 360 370 380 390 pF1KE4 KA-LERNIRTMFI----GGSQLSQKHV--SSPLASYFLSFPYARLGWAMTSADLNQDGHG : .:.. ..:. .:..: ...: .: ...:: : :.. ::::.:: NP_002 GAPRHRHMGAVFLLSQEAGGDLRRRQVLEGSQVGAYF--------GSAIALADLNNDGWQ 280 290 300 310 320 400 410 420 430 440 450 pF1KE4 DLVVGAPGYSRPGHIHIGRVYLIYGNDLGLP-PVDLDLDKEAHRILEGFQPSGR-FGSAL ::.:::: : . . ..: . .. :. : :. .: .:.: ::: :: .. NP_002 DLLVGAPYYFERKE-EVGGAIYVFMNQAGTSFPAHPSL------LLHG--PSGSAFGLSV 330 340 350 360 370 460 470 480 490 500 pF1KE4 AVL-DFNVDGVPDLAVGAPSVGSEQLTYKGAVYVYFGSKQGGMSSSPNITISCQDI---- : . :.: :: :.::::: : : ::.: .:..: . .:. .: . . NP_002 ASIGDINQDGFQDIAVGAPFEG------LGKVYIYHSSSKG-LLRQPQQVIHGEKLGLPG 380 390 400 410 420 510 520 530 540 550 560 pF1KE4 YCNLGWTLLAA-DVNGDSEPDLVIGSPFAPGGGKQKGIVAAFYSGPSLSDKEKLNVEAAN ..:..: . ::. . :::..:: NP_002 LATFGYSLSGQMDVDENFYPDLLVGSLSDHIVLLRARPVINIVHKTLVPRPAVLDPALCT 430 440 450 460 470 480 >>XP_011544151 (OMIM: 153370) PREDICTED: integrin alpha- (1074 aa) initn: 118 init1: 72 opt: 237 Z-score: 275.0 bits: 62.2 E(85289): 1.4e-08 Smith-Waterman score: 247; 27.1% identity (56.9% similar) in 295 aa overlap (259-534:241-507) 230 240 250 260 270 280 pF1KE4 YPTYSTKSPFLVEQFQEYFLGGLDDMAFWSTNIYHLTSFMLENGTS--DCNLPENPLFIA :. :::: .: ..: . .: .. .. XP_011 ASEFVKILDTFEKLKDLFTELQKKIYVIEGTSKQDLTSFNMELSSSGISADLSRGHAVVG 220 230 240 250 260 270 290 300 310 320 330 340 pF1KE4 CGGQQNHTQGSKMQKNDFHRNLTTSLTESVDRNINYTERGVFFSVNSWTPDSM--SFIYK : .. . : : :.. . : .: . .. : ..: .: :. . :.. . XP_011 AVGAKDWAGGFLDLKADLQDD-TFIGNEPLTPEVRAGYLG--YTV-TWLPSRQKTSLLAS 280 290 300 310 320 350 360 370 380 390 pF1KE4 ALERNI---RTMFI----GGSQLSQKHV--SSPLASYFLSFPYARLGWAMTSADLNQDGH . : :.... ::.. :: .. .. ..::: : . ..:..:::. XP_011 GAPRYQHMGRVLLFQEPQGGGHWSQVQTIHGTQIGSYF--------GGELCGVDVDQDGE 330 340 350 360 370 400 410 420 430 440 450 pF1KE4 GDLV-VGAPGYSRPGHIHIGRVYLIYGNDLGLPPVDLDLDKEAHRILEGFQPSGRFGSAL .:. .::: . :. . :::.. .::. :. .:. . :. : :::: :. XP_011 TELLLIGAPLFY--GEQRGGRVFIYQRRQLGFEEVS-ELQGDP-----GY-PLGRFGEAI 380 390 400 410 420 460 470 480 490 500 510 pF1KE4 AVL-DFNVDGVPDLAVGAPSVGSEQLTYKGAVYVYFGSKQGGMSSSPNITISCQDIYCNL ..: :.: ::. :.::::: : .::::.. : ..::.: .:. : .. .. XP_011 TALTDINGDGLVDVAVGAP------LEEQGAVYIFNG-RHGGLSPQPSQRIEGTQVLSGI 430 440 450 460 470 480 520 530 540 550 560 pF1KE4 GWTLLAA----DVNGDSEPDLVIGSPFAPGGGKQKGIVAAFYSGPSLSDKEKLNVEAANW : . :..::. :...:. XP_011 QWFGRSIHGVKDLEGDGLADVAVGAESQMIVLSSRPVVDMVTLMSFSPAEIPVHEVECSY 490 500 510 520 530 540 >>NP_001107852 (OMIM: 153370) integrin alpha-L isoform b (1086 aa) initn: 118 init1: 72 opt: 237 Z-score: 274.9 bits: 62.2 E(85289): 1.4e-08 Smith-Waterman score: 247; 27.1% identity (56.9% similar) in 295 aa overlap (259-534:254-520) 230 240 250 260 270 280 pF1KE4 YPTYSTKSPFLVEQFQEYFLGGLDDMAFWSTNIYHLTSFMLENGTS--DCNLPENPLFIA :. :::: .: ..: . .: .. .. NP_001 ASEFVKILDTFEKLKDLFTELQKKIYVIEGTSKQDLTSFNMELSSSGISADLSRGHAVVG 230 240 250 260 270 280 290 300 310 320 330 340 pF1KE4 CGGQQNHTQGSKMQKNDFHRNLTTSLTESVDRNINYTERGVFFSVNSWTPDSM--SFIYK : .. . : : :.. . : .: . .. : ..: .: :. . :.. . NP_001 AVGAKDWAGGFLDLKADLQDD-TFIGNEPLTPEVRAGYLG--YTV-TWLPSRQKTSLLAS 290 300 310 320 330 350 360 370 380 390 pF1KE4 ALERNI---RTMFI----GGSQLSQKHV--SSPLASYFLSFPYARLGWAMTSADLNQDGH . : :.... ::.. :: .. .. ..::: : . ..:..:::. NP_001 GAPRYQHMGRVLLFQEPQGGGHWSQVQTIHGTQIGSYF--------GGELCGVDVDQDGE 340 350 360 370 380 390 400 410 420 430 440 450 pF1KE4 GDLV-VGAPGYSRPGHIHIGRVYLIYGNDLGLPPVDLDLDKEAHRILEGFQPSGRFGSAL .:. .::: . :. . :::.. .::. :. .:. . :. : :::: :. NP_001 TELLLIGAPLFY--GEQRGGRVFIYQRRQLGFEEVS-ELQGDP-----GY-PLGRFGEAI 400 410 420 430 440 460 470 480 490 500 510 pF1KE4 AVL-DFNVDGVPDLAVGAPSVGSEQLTYKGAVYVYFGSKQGGMSSSPNITISCQDIYCNL ..: :.: ::. :.::::: : .::::.. : ..::.: .:. : .. .. NP_001 TALTDINGDGLVDVAVGAP------LEEQGAVYIFNG-RHGGLSPQPSQRIEGTQVLSGI 450 460 470 480 490 520 530 540 550 560 pF1KE4 GWTLLAA----DVNGDSEPDLVIGSPFAPGGGKQKGIVAAFYSGPSLSDKEKLNVEAANW : . :..::. :...:. NP_001 QWFGRSIHGVKDLEGDGLADVAVGAESQMIVLSSRPVVDMVTLMSFSPAEIPVHEVECSY 500 510 520 530 540 550 >>XP_006721107 (OMIM: 153370) PREDICTED: integrin alpha- (1087 aa) initn: 118 init1: 72 opt: 237 Z-score: 274.9 bits: 62.2 E(85289): 1.4e-08 Smith-Waterman score: 247; 27.1% identity (56.9% similar) in 295 aa overlap (259-534:254-520) 230 240 250 260 270 280 pF1KE4 YPTYSTKSPFLVEQFQEYFLGGLDDMAFWSTNIYHLTSFMLENGTS--DCNLPENPLFIA :. :::: .: ..: . .: .. .. XP_006 ASEFVKILDTFEKLKDLFTELQKKIYVIEGTSKQDLTSFNMELSSSGISADLSRGHAVVG 230 240 250 260 270 280 290 300 310 320 330 340 pF1KE4 CGGQQNHTQGSKMQKNDFHRNLTTSLTESVDRNINYTERGVFFSVNSWTPDSM--SFIYK : .. . : : :.. . : .: . .. : ..: .: :. . :.. . XP_006 AVGAKDWAGGFLDLKADLQDD-TFIGNEPLTPEVRAGYLG--YTV-TWLPSRQKTSLLAS 290 300 310 320 330 350 360 370 380 390 pF1KE4 ALERNI---RTMFI----GGSQLSQKHV--SSPLASYFLSFPYARLGWAMTSADLNQDGH . : :.... ::.. :: .. .. ..::: : . ..:..:::. XP_006 GAPRYQHMGRVLLFQEPQGGGHWSQVQTIHGTQIGSYF--------GGELCGVDVDQDGE 340 350 360 370 380 390 400 410 420 430 440 450 pF1KE4 GDLV-VGAPGYSRPGHIHIGRVYLIYGNDLGLPPVDLDLDKEAHRILEGFQPSGRFGSAL .:. .::: . :. . :::.. .::. :. .:. . :. : :::: :. XP_006 TELLLIGAPLFY--GEQRGGRVFIYQRRQLGFEEVS-ELQGDP-----GY-PLGRFGEAI 400 410 420 430 440 460 470 480 490 500 510 pF1KE4 AVL-DFNVDGVPDLAVGAPSVGSEQLTYKGAVYVYFGSKQGGMSSSPNITISCQDIYCNL ..: :.: ::. :.::::: : .::::.. : ..::.: .:. : .. .. XP_006 TALTDINGDGLVDVAVGAP------LEEQGAVYIFNG-RHGGLSPQPSQRIEGTQVLSGI 450 460 470 480 490 520 530 540 550 560 pF1KE4 GWTLLAA----DVNGDSEPDLVIGSPFAPGGGKQKGIVAAFYSGPSLSDKEKLNVEAANW : . :..::. :...:. XP_006 QWFGRSIHGVKDLEGDGLADVAVGAESQMIVLSSRPVVDMVTLMSFSPAEIPVHEVECSY 500 510 520 530 540 550 >>XP_005255370 (OMIM: 153370) PREDICTED: integrin alpha- (1169 aa) initn: 118 init1: 72 opt: 237 Z-score: 274.4 bits: 62.3 E(85289): 1.5e-08 Smith-Waterman score: 247; 27.1% identity (56.9% similar) in 295 aa overlap (259-534:337-603) 230 240 250 260 270 280 pF1KE4 YPTYSTKSPFLVEQFQEYFLGGLDDMAFWSTNIYHLTSFMLENGTS--DCNLPENPLFIA :. :::: .: ..: . .: .. .. XP_005 ASEFVKILDTFEKLKDLFTELQKKIYVIEGTSKQDLTSFNMELSSSGISADLSRGHAVVG 310 320 330 340 350 360 290 300 310 320 330 340 pF1KE4 CGGQQNHTQGSKMQKNDFHRNLTTSLTESVDRNINYTERGVFFSVNSWTPDSM--SFIYK : .. . : : :.. . : .: . .. : ..: .: :. . :.. . XP_005 AVGAKDWAGGFLDLKADLQDD-TFIGNEPLTPEVRAGYLG--YTV-TWLPSRQKTSLLAS 370 380 390 400 410 420 350 360 370 380 390 pF1KE4 ALERNI---RTMFI----GGSQLSQKHV--SSPLASYFLSFPYARLGWAMTSADLNQDGH . : :.... ::.. :: .. .. ..::: : . ..:..:::. XP_005 GAPRYQHMGRVLLFQEPQGGGHWSQVQTIHGTQIGSYF--------GGELCGVDVDQDGE 430 440 450 460 470 400 410 420 430 440 450 pF1KE4 GDLV-VGAPGYSRPGHIHIGRVYLIYGNDLGLPPVDLDLDKEAHRILEGFQPSGRFGSAL .:. .::: . :. . :::.. .::. :. .:. . :. : :::: :. XP_005 TELLLIGAPLFY--GEQRGGRVFIYQRRQLGFEEVS-ELQGDP-----GY-PLGRFGEAI 480 490 500 510 520 460 470 480 490 500 510 pF1KE4 AVL-DFNVDGVPDLAVGAPSVGSEQLTYKGAVYVYFGSKQGGMSSSPNITISCQDIYCNL ..: :.: ::. :.::::: : .::::.. : ..::.: .:. : .. .. XP_005 TALTDINGDGLVDVAVGAP------LEEQGAVYIFNG-RHGGLSPQPSQRIEGTQVLSGI 530 540 550 560 570 520 530 540 550 560 pF1KE4 GWTLLAA----DVNGDSEPDLVIGSPFAPGGGKQKGIVAAFYSGPSLSDKEKLNVEAANW : . :..::. :...:. XP_005 QWFGRSIHGVKDLEGDGLADVAVGAESQMIVLSSRPVVDMVTLMSFSPAEIPVHEVECSY 580 590 600 610 620 630 >>NP_002200 (OMIM: 153370) integrin alpha-L isoform a pr (1170 aa) initn: 118 init1: 72 opt: 237 Z-score: 274.4 bits: 62.3 E(85289): 1.5e-08 Smith-Waterman score: 247; 27.1% identity (56.9% similar) in 295 aa overlap (259-534:337-603) 230 240 250 260 270 280 pF1KE4 YPTYSTKSPFLVEQFQEYFLGGLDDMAFWSTNIYHLTSFMLENGTS--DCNLPENPLFIA :. :::: .: ..: . .: .. .. NP_002 ASEFVKILDTFEKLKDLFTELQKKIYVIEGTSKQDLTSFNMELSSSGISADLSRGHAVVG 310 320 330 340 350 360 290 300 310 320 330 340 pF1KE4 CGGQQNHTQGSKMQKNDFHRNLTTSLTESVDRNINYTERGVFFSVNSWTPDSM--SFIYK : .. . : : :.. . : .: . .. : ..: .: :. . :.. . NP_002 AVGAKDWAGGFLDLKADLQDD-TFIGNEPLTPEVRAGYLG--YTV-TWLPSRQKTSLLAS 370 380 390 400 410 420 350 360 370 380 390 pF1KE4 ALERNI---RTMFI----GGSQLSQKHV--SSPLASYFLSFPYARLGWAMTSADLNQDGH . : :.... ::.. :: .. .. ..::: : . ..:..:::. NP_002 GAPRYQHMGRVLLFQEPQGGGHWSQVQTIHGTQIGSYF--------GGELCGVDVDQDGE 430 440 450 460 470 400 410 420 430 440 450 pF1KE4 GDLV-VGAPGYSRPGHIHIGRVYLIYGNDLGLPPVDLDLDKEAHRILEGFQPSGRFGSAL .:. .::: . :. . :::.. .::. :. .:. . :. : :::: :. NP_002 TELLLIGAPLFY--GEQRGGRVFIYQRRQLGFEEVS-ELQGDP-----GY-PLGRFGEAI 480 490 500 510 520 460 470 480 490 500 510 pF1KE4 AVL-DFNVDGVPDLAVGAPSVGSEQLTYKGAVYVYFGSKQGGMSSSPNITISCQDIYCNL ..: :.: ::. :.::::: : .::::.. : ..::.: .:. : .. .. NP_002 TALTDINGDGLVDVAVGAP------LEEQGAVYIFNG-RHGGLSPQPSQRIEGTQVLSGI 530 540 550 560 570 520 530 540 550 560 pF1KE4 GWTLLAA----DVNGDSEPDLVIGSPFAPGGGKQKGIVAAFYSGPSLSDKEKLNVEAANW : . :..::. :...:. NP_002 QWFGRSIHGVKDLEGDGLADVAVGAESQMIVLSSRPVVDMVTLMSFSPAEIPVHEVECSY 580 590 600 610 620 630 840 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sat Nov 5 23:46:42 2016 done: Sat Nov 5 23:46:44 2016 Total Scan time: 8.730 Total Display time: 0.120 Function used was FASTA [36.3.4 Apr, 2011]