FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE4583, 840 aa 1>>>pF1KE4583 840 - 840 aa - 840 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.7342+/-0.00112; mu= 17.6848+/- 0.067 mean_var=67.6512+/-13.452, 0's: 0 Z-trim(102.3): 39 B-trim: 2 in 1/48 Lambda= 0.155932 statistics sampled from 6844 (6875) to 6844 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.577), E-opt: 0.2 (0.211), width: 16 Scan time: 3.320 The best scores are: opt bits E(32554) CCDS4553.1 GPLD1 gene_id:2822|Hs108|chr6 ( 840) 5685 1288.8 0 >>CCDS4553.1 GPLD1 gene_id:2822|Hs108|chr6 (840 aa) initn: 5685 init1: 5685 opt: 5685 Z-score: 6905.5 bits: 1288.8 E(32554): 0 Smith-Waterman score: 5685; 100.0% identity (100.0% similar) in 840 aa overlap (1-840:1-840) 10 20 30 40 50 60 pF1KE4 MSAFRLWPGLLIMLGSLCHRGSPCGLSTHVEIGHRALEFLQLHNGRVNYRELLLEHQDAY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 MSAFRLWPGLLIMLGSLCHRGSPCGLSTHVEIGHRALEFLQLHNGRVNYRELLLEHQDAY 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE4 QAGIVFPDCFYPSICKGGKFHDVSESTHWTPFLNASVHYIRENYPLPWEKDTEKLVAFLF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 QAGIVFPDCFYPSICKGGKFHDVSESTHWTPFLNASVHYIRENYPLPWEKDTEKLVAFLF 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE4 GITSHMAADVSWHSLGLEQGFLRTMGAIDFHGSYSEAHSAGDFGGDVLSQFEFNFNYLAR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 GITSHMAADVSWHSLGLEQGFLRTMGAIDFHGSYSEAHSAGDFGGDVLSQFEFNFNYLAR 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE4 RWYVPVKDLLGIYEKLYGRKVITENVIVDCSHIQFLEMYGEMLAVSKLYPTYSTKSPFLV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 RWYVPVKDLLGIYEKLYGRKVITENVIVDCSHIQFLEMYGEMLAVSKLYPTYSTKSPFLV 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE4 EQFQEYFLGGLDDMAFWSTNIYHLTSFMLENGTSDCNLPENPLFIACGGQQNHTQGSKMQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 EQFQEYFLGGLDDMAFWSTNIYHLTSFMLENGTSDCNLPENPLFIACGGQQNHTQGSKMQ 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE4 KNDFHRNLTTSLTESVDRNINYTERGVFFSVNSWTPDSMSFIYKALERNIRTMFIGGSQL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 KNDFHRNLTTSLTESVDRNINYTERGVFFSVNSWTPDSMSFIYKALERNIRTMFIGGSQL 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE4 SQKHVSSPLASYFLSFPYARLGWAMTSADLNQDGHGDLVVGAPGYSRPGHIHIGRVYLIY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 SQKHVSSPLASYFLSFPYARLGWAMTSADLNQDGHGDLVVGAPGYSRPGHIHIGRVYLIY 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE4 GNDLGLPPVDLDLDKEAHRILEGFQPSGRFGSALAVLDFNVDGVPDLAVGAPSVGSEQLT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 GNDLGLPPVDLDLDKEAHRILEGFQPSGRFGSALAVLDFNVDGVPDLAVGAPSVGSEQLT 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE4 YKGAVYVYFGSKQGGMSSSPNITISCQDIYCNLGWTLLAADVNGDSEPDLVIGSPFAPGG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 YKGAVYVYFGSKQGGMSSSPNITISCQDIYCNLGWTLLAADVNGDSEPDLVIGSPFAPGG 490 500 510 520 530 540 550 560 570 580 590 600 pF1KE4 GKQKGIVAAFYSGPSLSDKEKLNVEAANWTVRGEEDFSWFGYSLHGVTVDNRTLLLVGSP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 GKQKGIVAAFYSGPSLSDKEKLNVEAANWTVRGEEDFSWFGYSLHGVTVDNRTLLLVGSP 550 560 570 580 590 600 610 620 630 640 650 660 pF1KE4 TWKNASRLGHLLHIRDEKKSLGRVYGYFPPNGQSWFTISGDKAMGKLGTSLSSGHVLMNG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 TWKNASRLGHLLHIRDEKKSLGRVYGYFPPNGQSWFTISGDKAMGKLGTSLSSGHVLMNG 610 620 630 640 650 660 670 680 690 700 710 720 pF1KE4 TLKQVLLVGAPTYDDVSKVAFLTVTLHQGGATRMYALTSDAQPLLLSTFSGDRRFSRFGG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 TLKQVLLVGAPTYDDVSKVAFLTVTLHQGGATRMYALTSDAQPLLLSTFSGDRRFSRFGG 670 680 690 700 710 720 730 740 750 760 770 780 pF1KE4 VLHLSDLDDDGLDEIIMAAPLRIADVTSGLIGGEDGRVYVYNGKETTLGDMTGKCKSWIT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 VLHLSDLDDDGLDEIIMAAPLRIADVTSGLIGGEDGRVYVYNGKETTLGDMTGKCKSWIT 730 740 750 760 770 780 790 800 810 820 830 840 pF1KE4 PCPEEKAQYVLISPEASSRFGSSLITVRSKAKNQVVIAAGRSSLGARLSGALHVYSLGSD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 PCPEEKAQYVLISPEASSRFGSSLITVRSKAKNQVVIAAGRSSLGARLSGALHVYSLGSD 790 800 810 820 830 840 840 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sat Nov 5 23:46:41 2016 done: Sat Nov 5 23:46:42 2016 Total Scan time: 3.320 Total Display time: -0.010 Function used was FASTA [36.3.4 Apr, 2011]