FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE2217, 293 aa 1>>>pF1KE2217 293 - 293 aa - 293 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.3107+/-0.000824; mu= 15.4667+/- 0.050 mean_var=66.8212+/-13.631, 0's: 0 Z-trim(106.7): 40 B-trim: 60 in 1/50 Lambda= 0.156898 statistics sampled from 9072 (9109) to 9072 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.672), E-opt: 0.2 (0.28), width: 16 Scan time: 2.030 The best scores are: opt bits E(32554) CCDS4523.1 TBC1D7 gene_id:51256|Hs108|chr6 ( 293) 1969 454.4 4.5e-128 CCDS47376.1 TBC1D7 gene_id:51256|Hs108|chr6 ( 266) 1553 360.2 9.2e-100 CCDS58995.1 TBC1D7 gene_id:51256|Hs108|chr6 ( 247) 848 200.6 9.4e-52 CCDS83062.1 TBC1D7 gene_id:51256|Hs108|chr6 ( 164) 428 105.5 2.8e-23 >>CCDS4523.1 TBC1D7 gene_id:51256|Hs108|chr6 (293 aa) initn: 1969 init1: 1969 opt: 1969 Z-score: 2412.8 bits: 454.4 E(32554): 4.5e-128 Smith-Waterman score: 1969; 100.0% identity (100.0% similar) in 293 aa overlap (1-293:1-293) 10 20 30 40 50 60 pF1KE2 MTEDSQRNFRSVYYEKVGFRGVEEKKSLEILLKDDRLDTEKLCTFSQRFPLPSMYRALVW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 MTEDSQRNFRSVYYEKVGFRGVEEKKSLEILLKDDRLDTEKLCTFSQRFPLPSMYRALVW 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 KVLLGILPPHHESHAKVMMYRKEQYLDVLHALKVVRFVSDATPQAEVYLRMYQLESGKLP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 KVLLGILPPHHESHAKVMMYRKEQYLDVLHALKVVRFVSDATPQAEVYLRMYQLESGKLP 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE2 RSPSFPLEPDDEVFLAIAKAMEEMVEDSVDCYWITRRFVNQLNTKYRDSLPQLPKAFEQY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 RSPSFPLEPDDEVFLAIAKAMEEMVEDSVDCYWITRRFVNQLNTKYRDSLPQLPKAFEQY 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE2 LNLEDGRLLTHLRMCSAAPKLPYDLWFKRCFAGCLPESSLQRVWDKVVSGSCKILVFVAV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 LNLEDGRLLTHLRMCSAAPKLPYDLWFKRCFAGCLPESSLQRVWDKVVSGSCKILVFVAV 190 200 210 220 230 240 250 260 270 280 290 pF1KE2 EILLTFKIKVMALNSAEKITKFLENIPQDSSDAIVSKAIDLWHKHCGTPVHSS ::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 EILLTFKIKVMALNSAEKITKFLENIPQDSSDAIVSKAIDLWHKHCGTPVHSS 250 260 270 280 290 >>CCDS47376.1 TBC1D7 gene_id:51256|Hs108|chr6 (266 aa) initn: 1553 init1: 1553 opt: 1553 Z-score: 1904.6 bits: 360.2 E(32554): 9.2e-100 Smith-Waterman score: 1719; 90.8% identity (90.8% similar) in 293 aa overlap (1-293:1-266) 10 20 30 40 50 60 pF1KE2 MTEDSQRNFRSVYYEKVGFRGVEEKKSLEILLKDDRLDTEKLCTFSQRFPLPSMYRALVW ::::::::::::::::::::::::::::::::::::: CCDS47 MTEDSQRNFRSVYYEKVGFRGVEEKKSLEILLKDDRL----------------------- 10 20 30 70 80 90 100 110 120 pF1KE2 KVLLGILPPHHESHAKVMMYRKEQYLDVLHALKVVRFVSDATPQAEVYLRMYQLESGKLP :::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 ----GILPPHHESHAKVMMYRKEQYLDVLHALKVVRFVSDATPQAEVYLRMYQLESGKLP 40 50 60 70 80 90 130 140 150 160 170 180 pF1KE2 RSPSFPLEPDDEVFLAIAKAMEEMVEDSVDCYWITRRFVNQLNTKYRDSLPQLPKAFEQY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 RSPSFPLEPDDEVFLAIAKAMEEMVEDSVDCYWITRRFVNQLNTKYRDSLPQLPKAFEQY 100 110 120 130 140 150 190 200 210 220 230 240 pF1KE2 LNLEDGRLLTHLRMCSAAPKLPYDLWFKRCFAGCLPESSLQRVWDKVVSGSCKILVFVAV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 LNLEDGRLLTHLRMCSAAPKLPYDLWFKRCFAGCLPESSLQRVWDKVVSGSCKILVFVAV 160 170 180 190 200 210 250 260 270 280 290 pF1KE2 EILLTFKIKVMALNSAEKITKFLENIPQDSSDAIVSKAIDLWHKHCGTPVHSS ::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 EILLTFKIKVMALNSAEKITKFLENIPQDSSDAIVSKAIDLWHKHCGTPVHSS 220 230 240 250 260 >>CCDS58995.1 TBC1D7 gene_id:51256|Hs108|chr6 (247 aa) initn: 896 init1: 844 opt: 848 Z-score: 1042.6 bits: 200.6 E(32554): 9.4e-52 Smith-Waterman score: 1557; 84.3% identity (84.3% similar) in 293 aa overlap (1-293:1-247) 10 20 30 40 50 60 pF1KE2 MTEDSQRNFRSVYYEKVGFRGVEEKKSLEILLKDDRLDTEKLCTFSQRFPLPSMYRALVW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS58 MTEDSQRNFRSVYYEKVGFRGVEEKKSLEILLKDDRLDTEKLCTFSQRFPLPSMYRALVW 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 KVLLGILPPHHESHAKVMMYRKEQYLDVLHALKVVRFVSDATPQAEVYLRMYQLESGKLP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS58 KVLLGILPPHHESHAKVMMYRKEQYLDVLHALKVVRFVSDATPQAEVYLRMYQLESGKLP 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE2 RSPSFPLEPDDEVFLAIAKAMEEMVEDSVDCYWITRRFVNQLNTKYRDSLPQLPKAFEQY ::::::: ::::::: CCDS58 RSPSFPL----------------------------------------------PKAFEQY 130 190 200 210 220 230 240 pF1KE2 LNLEDGRLLTHLRMCSAAPKLPYDLWFKRCFAGCLPESSLQRVWDKVVSGSCKILVFVAV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS58 LNLEDGRLLTHLRMCSAAPKLPYDLWFKRCFAGCLPESSLQRVWDKVVSGSCKILVFVAV 140 150 160 170 180 190 250 260 270 280 290 pF1KE2 EILLTFKIKVMALNSAEKITKFLENIPQDSSDAIVSKAIDLWHKHCGTPVHSS ::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS58 EILLTFKIKVMALNSAEKITKFLENIPQDSSDAIVSKAIDLWHKHCGTPVHSS 200 210 220 230 240 >>CCDS83062.1 TBC1D7 gene_id:51256|Hs108|chr6 (164 aa) initn: 428 init1: 428 opt: 428 Z-score: 531.5 bits: 105.5 E(32554): 2.8e-23 Smith-Waterman score: 594; 78.7% identity (78.7% similar) in 127 aa overlap (1-127:1-100) 10 20 30 40 50 60 pF1KE2 MTEDSQRNFRSVYYEKVGFRGVEEKKSLEILLKDDRLDTEKLCTFSQRFPLPSMYRALVW :::::::::::::::::::::::::::::::::::: CCDS83 MTEDSQRNFRSVYYEKVGFRGVEEKKSLEILLKDDR------------------------ 10 20 30 70 80 90 100 110 120 pF1KE2 KVLLGILPPHHESHAKVMMYRKEQYLDVLHALKVVRFVSDATPQAEVYLRMYQLESGKLP ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS83 ---LGILPPHHESHAKVMMYRKEQYLDVLHALKVVRFVSDATPQAEVYLRMYQLESGKLP 40 50 60 70 80 90 130 140 150 160 170 180 pF1KE2 RSPSFPLEPDDEVFLAIAKAMEEMVEDSVDCYWITRRFVNQLNTKYRDSLPQLPKAFEQY ::::::: CCDS83 RSPSFPLVSGHFCLTLSSTLDRPILPAFDYIMFCLKNFWWLPVVIRIKVTHLYLAFMAMH 100 110 120 130 140 150 293 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 16:59:25 2016 done: Sun Nov 6 16:59:25 2016 Total Scan time: 2.030 Total Display time: -0.010 Function used was FASTA [36.3.4 Apr, 2011]