FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE6173, 81 aa 1>>>pF1KE6173 81 - 81 aa - 81 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 4.4745+/-0.000522; mu= 11.7814+/- 0.031 mean_var=52.5787+/-11.118, 0's: 0 Z-trim(113.4): 11 B-trim: 0 in 0/49 Lambda= 0.176876 statistics sampled from 14031 (14036) to 14031 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.793), E-opt: 0.2 (0.431), width: 16 Scan time: 1.060 The best scores are: opt bits E(32554) CCDS4383.1 ATP6V0E1 gene_id:8992|Hs108|chr5 ( 81) 594 158.3 4.8e-40 CCDS55181.1 ATP6V0E2 gene_id:155066|Hs108|chr7 ( 130) 449 121.4 9.6e-29 CCDS47742.1 ATP6V0E2 gene_id:155066|Hs108|chr7 ( 213) 262 73.8 3.3e-14 >>CCDS4383.1 ATP6V0E1 gene_id:8992|Hs108|chr5 (81 aa) initn: 594 init1: 594 opt: 594 Z-score: 832.4 bits: 158.3 E(32554): 4.8e-40 Smith-Waterman score: 594; 100.0% identity (100.0% similar) in 81 aa overlap (1-81:1-81) 10 20 30 40 50 60 pF1KE6 MAYHGLTVPLIVMSVFWGFVGFLVPWFIPKGPNRGVIITMLVTCSVCCYLFWLIAILAQL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 MAYHGLTVPLIVMSVFWGFVGFLVPWFIPKGPNRGVIITMLVTCSVCCYLFWLIAILAQL 10 20 30 40 50 60 70 80 pF1KE6 NPLFGPQLKNETIWYLKYHWP ::::::::::::::::::::: CCDS43 NPLFGPQLKNETIWYLKYHWP 70 80 >>CCDS55181.1 ATP6V0E2 gene_id:155066|Hs108|chr7 (130 aa) initn: 440 init1: 410 opt: 449 Z-score: 629.5 bits: 121.4 E(32554): 9.6e-29 Smith-Waterman score: 449; 71.2% identity (93.8% similar) in 80 aa overlap (1-80:50-129) 10 20 30 pF1KE6 MAYHGLTVPLIVMSVFWGFVGFLVPWFIPK :. :....:.:....:::.::. :::.:: CCDS55 MLSALPGWGPAHLQRPLLGPASCLGILRPAMTAHSFALPVIIFTTFWGLVGIAGPWFVPK 20 30 40 50 60 70 40 50 60 70 80 pF1KE6 GPNRGVIITMLVTCSVCCYLFWLIAILAQLNPLFGPQLKNETIWYLKYHWP ::::::::::::. .::::::::::::::::::::::::::::::... : CCDS55 GPNRGVIITMLVATAVCCYLFWLIAILAQLNPLFGPQLKNETIWYVRFLWE 80 90 100 110 120 130 >>CCDS47742.1 ATP6V0E2 gene_id:155066|Hs108|chr7 (213 aa) initn: 224 init1: 214 opt: 262 Z-score: 368.6 bits: 73.8 E(32554): 3.3e-14 Smith-Waterman score: 262; 50.7% identity (77.5% similar) in 71 aa overlap (1-66:50-120) 10 20 30 pF1KE6 MAYHGLTVPLIVMSVFWGFVGFLVPWFIPK :. :....:.:....:::.::. :::.:: CCDS47 MLSALPGWGPAHLQRPLLGPASCLGILRPAMTAHSFALPVIIFTTFWGLVGIAGPWFVPK 20 30 40 50 60 70 40 50 60 70 80 pF1KE6 GPNRGVIITMLVTCSVCCYLF-----WLIAILAQLNPLFGPQLKNETIWYLKYHWP ::::::::::::. .:::::. .: :. .: :: CCDS47 GPNRGVIITMLVATAVCCYLLCPALGMTVAPLSLTTPSSGPSPTQLCLVTSSLLLAPRDP 80 90 100 110 120 130 CCDS47 DPQGLPGSWKSSQSSQPARALGSPGHSSGRGDVLLQYPHCSGVCPLSQGDAAGELVWVGS 140 150 160 170 180 190 81 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 10:04:17 2016 done: Tue Nov 8 10:04:17 2016 Total Scan time: 1.060 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]