FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE9691, 605 aa 1>>>pF1KE9691 605 - 605 aa - 605 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 11.4326+/-0.00159; mu= -7.7322+/- 0.093 mean_var=459.2699+/-103.958, 0's: 0 Z-trim(107.5): 116 B-trim: 209 in 2/52 Lambda= 0.059847 statistics sampled from 9576 (9636) to 9576 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.626), E-opt: 0.2 (0.296), width: 16 Scan time: 3.210 The best scores are: opt bits E(32554) CCDS4370.1 SPDL1 gene_id:54908|Hs108|chr5 ( 605) 3799 343.4 5e-94 >>CCDS4370.1 SPDL1 gene_id:54908|Hs108|chr5 (605 aa) initn: 3799 init1: 3799 opt: 3799 Z-score: 1801.6 bits: 343.4 E(32554): 5e-94 Smith-Waterman score: 3799; 99.7% identity (99.8% similar) in 605 aa overlap (1-605:1-605) 10 20 30 40 50 60 pF1KE9 MEADIITNLRCRLKEAEEERLKAAQYGLQLVESQNELQNQLDKCRNEMMTMTESYEQEKY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 MEADIITNLRCRLKEAEEERLKAAQYGLQLVESQNELQNQLDKCRNEMMTMTESYEQEKY 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE9 TLQREVELKSRMLESLSCECEAIKQQQKMHLEKLEEQLSRSHGQEVNELKTKIEKLKVEL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 TLQREVELKSRMLESLSCECEAIKQQQKMHLEKLEEQLSRSHGQEVNELKTKIEKLKVEL 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE9 DEARLSEKQLKHQVDHQKELLSCKSEELRVMSERVQESMSSEMLALQIELTEMESMKTTL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 DEARLSEKQLKHQVDHQKELLSCKSEELRVMSERVQESMSSEMLALQIELTEMESMKTTL 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE9 KEEVNELQYRQEQLELLITNLMRQVDRLKEEKEEREKEAVSYYNALEKARVANQDLQVQL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 KEEVNELQYRQEQLELLITNLMRQVDRLKEEKEEREKEAVSYYNALEKARVANQDLQVQL 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE9 DQALQQALDPNSKGNSLFAEVEDRRAAMERQLISMKVKYQSLKKQNVFNREQMQRMKLQI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 DQALQQALDPNSKGNSLFAEVEDRRAAMERQLISMKVKYQSLKKQNVFNREQMQRMKLQI 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE9 ATLLQMKGSQTEFEQQERLLAMLEQKNGEIKHLLGEIRNLEKFKNLYDSMESKPSVDSGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 ATLLQMKGSQTEFEQQERLLAMLEQKNGEIKHLLGEIRNLEKFKNLYDSMESKPSVDSGT 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE9 LEDNTYYTDLLQMKLDNLNKEIESTKGELSIQRMKALFESQRALDIERKLFANERCLQLS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 LEDNTYYTDLLQMKLDNLNKEIESTKGELSIQRMKALFESQRALDIERKLFANERCLQLS 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE9 ESENMKLRAKLDELKLKYEPEETVEVPVLKKRREVLPVDITTAKDACVNNSALGGEVYRL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 ESENMKLRAKLDELKLKYEPEETVEVPVLKKRREVLPVDITTAKDACVNNSALGGEVYRL 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE9 PPQKEETQSCPNSLEDNNLQLEKSVSIHTPVVSLSPHKNLPVDMQLKKEKKCVKLIGVPA :::::::::::::::::::::::::::.:::::::::::::::::::::::::::::::: CCDS43 PPQKEETQSCPNSLEDNNLQLEKSVSIYTPVVSLSPHKNLPVDMQLKKEKKCVKLIGVPA 490 500 510 520 530 540 550 560 570 580 590 600 pF1KE9 DAEALSERSGNTPNSPRLAAESKLQTEVKEGKETSSKLEKETCKKSHPILYVSSKSTPET ::::::::::::::::::::::::::::::::::::::::::::: :::::::::::::: CCDS43 DAEALSERSGNTPNSPRLAAESKLQTEVKEGKETSSKLEKETCKKLHPILYVSSKSTPET 550 560 570 580 590 600 pF1KE9 QCPQQ ::::: CCDS43 QCPQQ 605 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 10:42:36 2016 done: Tue Nov 8 10:42:36 2016 Total Scan time: 3.210 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]