FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE2451, 378 aa 1>>>pF1KE2451 378 - 378 aa - 378 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 8.6736+/-0.000409; mu= -0.1791+/- 0.025 mean_var=154.7840+/-30.421, 0's: 0 Z-trim(115.9): 60 B-trim: 72 in 2/56 Lambda= 0.103089 statistics sampled from 26624 (26682) to 26624 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.678), E-opt: 0.2 (0.313), width: 16 Scan time: 7.540 The best scores are: opt bits E(85289) NP_612388 (OMIM: 610096) T-cell immunoglobulin and ( 378) 2485 381.6 1.6e-105 XP_011532996 (OMIM: 610096) PREDICTED: T-cell immu ( 299) 1852 287.4 2.9e-77 NP_001140198 (OMIM: 610096) T-cell immunoglobulin ( 350) 1660 258.9 1.3e-68 XP_016865510 (OMIM: 610096) PREDICTED: T-cell immu ( 323) 1528 239.2 1e-62 XP_016864829 (OMIM: 147050,606518) PREDICTED: hepa ( 352) 449 78.8 2.2e-14 NP_036338 (OMIM: 147050,606518) hepatitis A virus ( 364) 449 78.8 2.3e-14 NP_001166864 (OMIM: 147050,606518) hepatitis A vir ( 364) 449 78.8 2.3e-14 NP_001295085 (OMIM: 147050,606518) hepatitis A vir ( 401) 449 78.8 2.5e-14 XP_016864828 (OMIM: 147050,606518) PREDICTED: hepa ( 400) 448 78.6 2.7e-14 NP_116171 (OMIM: 606652) hepatitis A virus cellula ( 301) 333 61.5 3e-09 XP_016879701 (OMIM: 609807) PREDICTED: CMRF35-like ( 309) 209 43.1 0.0011 XP_016879705 (OMIM: 609807) PREDICTED: CMRF35-like ( 240) 189 40.0 0.0068 XP_016879703 (OMIM: 609807) PREDICTED: CMRF35-like ( 263) 189 40.1 0.0074 XP_016879702 (OMIM: 609807) PREDICTED: CMRF35-like ( 266) 189 40.1 0.0075 NP_001276013 (OMIM: 609807) CMRF35-like molecule 1 ( 305) 188 39.9 0.0094 >>NP_612388 (OMIM: 610096) T-cell immunoglobulin and muc (378 aa) initn: 2485 init1: 2485 opt: 2485 Z-score: 2015.2 bits: 381.6 E(85289): 1.6e-105 Smith-Waterman score: 2485; 99.7% identity (100.0% similar) in 378 aa overlap (1-378:1-378) 10 20 30 40 50 60 pF1KE2 MSKEPLILWLMIEFWWLYLTPVTSETVVTEVLGHRVTLPCLYSSWSHNSNSMCWGKDQCP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_612 MSKEPLILWLMIEFWWLYLTPVTSETVVTEVLGHRVTLPCLYSSWSHNSNSMCWGKDQCP 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 YSGCKEALIRTDGMRVTSRKSAKYRLQGTIPRGDVSLTILNPSESDSGVYCCRIEVPGWF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_612 YSGCKEALIRTDGMRVTSRKSAKYRLQGTIPRGDVSLTILNPSESDSGVYCCRIEVPGWF 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE2 NDVKINVRLNLQRASTTTHRTATTTTRRTTTTSPTTTRQMTTTPAALPTTVVTTPDLTTG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_612 NDVKINVRLNLQRASTTTHRTATTTTRRTTTTSPTTTRQMTTTPAALPTTVVTTPDLTTG 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE2 TPLQMTTIAVFTTANTCLSLTPSTLPEEATGLLTPEPSKEGPILTAESETVLPSDSWSSA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::. NP_612 TPLQMTTIAVFTTANTCLSLTPSTLPEEATGLLTPEPSKEGPILTAESETVLPSDSWSSV 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE2 ESTSADTVLLTSKESKVWDLPSTSHVSMWKTSDSVSSPQPGASDTAVPEQNKTTKTGQMD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_612 ESTSADTVLLTSKESKVWDLPSTSHVSMWKTSDSVSSPQPGASDTAVPEQNKTTKTGQMD 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE2 GIPMSMKNEMPISQLLMIIAPSLGFVLFALFVAFLLRGKLMETYCSQKHTRLDYIGDSKN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_612 GIPMSMKNEMPISQLLMIIAPSLGFVLFALFVAFLLRGKLMETYCSQKHTRLDYIGDSKN 310 320 330 340 350 360 370 pF1KE2 VLNDVQHGREDEDGLFTL :::::::::::::::::: NP_612 VLNDVQHGREDEDGLFTL 370 >>XP_011532996 (OMIM: 610096) PREDICTED: T-cell immunogl (299 aa) initn: 1852 init1: 1852 opt: 1852 Z-score: 1508.1 bits: 287.4 E(85289): 2.9e-77 Smith-Waterman score: 1852; 99.6% identity (100.0% similar) in 281 aa overlap (1-281:1-281) 10 20 30 40 50 60 pF1KE2 MSKEPLILWLMIEFWWLYLTPVTSETVVTEVLGHRVTLPCLYSSWSHNSNSMCWGKDQCP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 MSKEPLILWLMIEFWWLYLTPVTSETVVTEVLGHRVTLPCLYSSWSHNSNSMCWGKDQCP 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 YSGCKEALIRTDGMRVTSRKSAKYRLQGTIPRGDVSLTILNPSESDSGVYCCRIEVPGWF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 YSGCKEALIRTDGMRVTSRKSAKYRLQGTIPRGDVSLTILNPSESDSGVYCCRIEVPGWF 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE2 NDVKINVRLNLQRASTTTHRTATTTTRRTTTTSPTTTRQMTTTPAALPTTVVTTPDLTTG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 NDVKINVRLNLQRASTTTHRTATTTTRRTTTTSPTTTRQMTTTPAALPTTVVTTPDLTTG 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE2 TPLQMTTIAVFTTANTCLSLTPSTLPEEATGLLTPEPSKEGPILTAESETVLPSDSWSSA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::. XP_011 TPLQMTTIAVFTTANTCLSLTPSTLPEEATGLLTPEPSKEGPILTAESETVLPSDSWSSV 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE2 ESTSADTVLLTSKESKVWDLPSTSHVSMWKTSDSVSSPQPGASDTAVPEQNKTTKTGQMD ::::::::::::::::::::::::::::::::::::::::: XP_011 ESTSADTVLLTSKESKVWDLPSTSHVSMWKTSDSVSSPQPGEMSSHHVAQAGLKSLGLK 250 260 270 280 290 310 320 330 340 350 360 pF1KE2 GIPMSMKNEMPISQLLMIIAPSLGFVLFALFVAFLLRGKLMETYCSQKHTRLDYIGDSKN >>NP_001140198 (OMIM: 610096) T-cell immunoglobulin and (350 aa) initn: 1727 init1: 1660 opt: 1660 Z-score: 1352.6 bits: 258.9 E(85289): 1.3e-68 Smith-Waterman score: 2223; 92.3% identity (92.6% similar) in 378 aa overlap (1-378:1-350) 10 20 30 40 50 60 pF1KE2 MSKEPLILWLMIEFWWLYLTPVTSETVVTEVLGHRVTLPCLYSSWSHNSNSMCWGKDQCP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MSKEPLILWLMIEFWWLYLTPVTSETVVTEVLGHRVTLPCLYSSWSHNSNSMCWGKDQCP 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 YSGCKEALIRTDGMRVTSRKSAKYRLQGTIPRGDVSLTILNPSESDSGVYCCRIEVPGWF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 YSGCKEALIRTDGMRVTSRKSAKYRLQGTIPRGDVSLTILNPSESDSGVYCCRIEVPGWF 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE2 NDVKINVRLNLQRASTTTHRTATTTTRRTTTTSPTTTRQMTTTPAALPTTVVTTPDLTTG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 NDVKINVRLNLQRASTTTHRTATTTTRRTTTTSPTTTRQMTTTPAALPTTVVTTPDLTTG 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE2 TPLQMTTIAVFTTANTCLSLTPSTLPEEATGLLTPEPSKEGPILTAESETVLPSDSWSSA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::. NP_001 TPLQMTTIAVFTTANTCLSLTPSTLPEEATGLLTPEPSKEGPILTAESETVLPSDSWSSV 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE2 ESTSADTVLLTSKESKVWDLPSTSHVSMWKTSDSVSSPQPGASDTAVPEQNKTTKTGQMD ::::::::::::: ::::::::::::::::::: NP_001 ESTSADTVLLTSK----------------------------ASDTAVPEQNKTTKTGQMD 250 260 270 310 320 330 340 350 360 pF1KE2 GIPMSMKNEMPISQLLMIIAPSLGFVLFALFVAFLLRGKLMETYCSQKHTRLDYIGDSKN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 GIPMSMKNEMPISQLLMIIAPSLGFVLFALFVAFLLRGKLMETYCSQKHTRLDYIGDSKN 280 290 300 310 320 330 370 pF1KE2 VLNDVQHGREDEDGLFTL :::::::::::::::::: NP_001 VLNDVQHGREDEDGLFTL 340 350 >>XP_016865510 (OMIM: 610096) PREDICTED: T-cell immunogl (323 aa) initn: 1591 init1: 1524 opt: 1528 Z-score: 1247.1 bits: 239.2 E(85289): 1e-62 Smith-Waterman score: 2014; 85.4% identity (85.4% similar) in 378 aa overlap (1-378:1-323) 10 20 30 40 50 60 pF1KE2 MSKEPLILWLMIEFWWLYLTPVTSETVVTEVLGHRVTLPCLYSSWSHNSNSMCWGKDQCP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 MSKEPLILWLMIEFWWLYLTPVTSETVVTEVLGHRVTLPCLYSSWSHNSNSMCWGKDQCP 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 YSGCKEALIRTDGMRVTSRKSAKYRLQGTIPRGDVSLTILNPSESDSGVYCCRIEVPGWF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 YSGCKEALIRTDGMRVTSRKSAKYRLQGTIPRGDVSLTILNPSESDSGVYCCRIEVPGWF 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE2 NDVKINVRLNLQRASTTTHRTATTTTRRTTTTSPTTTRQMTTTPAALPTTVVTTPDLTTG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 NDVKINVRLNLQRASTTTHRTATTTTRRTTTTSPTTTRQMTTTPAALPTTVVTTPDLTTG 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE2 TPLQMTTIAVFTTANTCLSLTPSTLPEEATGLLTPEPSKEGPILTAESETVLPSDSWSSA :::::::::::::::::::::::::::::::::::::::::::::: XP_016 TPLQMTTIAVFTTANTCLSLTPSTLPEEATGLLTPEPSKEGPILTA-------------- 190 200 210 220 250 260 270 280 290 300 pF1KE2 ESTSADTVLLTSKESKVWDLPSTSHVSMWKTSDSVSSPQPGASDTAVPEQNKTTKTGQMD ::::::::::::::::::: XP_016 -----------------------------------------ASDTAVPEQNKTTKTGQMD 230 240 310 320 330 340 350 360 pF1KE2 GIPMSMKNEMPISQLLMIIAPSLGFVLFALFVAFLLRGKLMETYCSQKHTRLDYIGDSKN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 GIPMSMKNEMPISQLLMIIAPSLGFVLFALFVAFLLRGKLMETYCSQKHTRLDYIGDSKN 250 260 270 280 290 300 370 pF1KE2 VLNDVQHGREDEDGLFTL :::::::::::::::::: XP_016 VLNDVQHGREDEDGLFTL 310 320 >>XP_016864829 (OMIM: 147050,606518) PREDICTED: hepatiti (352 aa) initn: 357 init1: 357 opt: 449 Z-score: 379.2 bits: 78.8 E(85289): 2.2e-14 Smith-Waterman score: 449; 37.5% identity (60.5% similar) in 256 aa overlap (33-281:29-272) 10 20 30 40 50 60 pF1KE2 KEPLILWLMIEFWWLYLTPVTSETVVTEVLGHRVTLPCLYSSWSHNSNSMCWGKDQCPYS : ::::: ::. .::::.. .: XP_016 MHPQVVILSLILHLADSVAGSVKVGGEAGPSVTLPCHYSG---AVTSMCWNRGSCSLF 10 20 30 40 50 70 80 90 100 110 120 pF1KE2 GCKEALIRTDGMRVTSRKSAKYRLQGTIPRGDVSLTILNPSESDSGVYCCRIEVPGWFND :..... :.: .:: ::...:.: : . : :::::: : . :::::::::.: ::::: XP_016 TCQNGIVWTNGTHVTYRKDTRYKLLGDLSRRDVSLTIENTAVSDSGVYCCRVEHRGWFND 60 70 80 90 100 110 130 140 150 160 170 pF1KE2 VKINVRLNLQRASTTTHRTATT----TTRRTTTTSPTTTR-QMTTTPAALPTTVVTTPDL .::.: :.. ..:: .:: :: ::.:: :::: :::.:.. :... : XP_016 MKITVSLEIVPPKVTTTPIVTTVPTVTTVRTSTTVPTTTTVPMTTVPTTTVPTTMSIP-- 120 130 140 150 160 170 180 190 200 210 220 230 pF1KE2 TTGTPLQMTTIAVFTTANTCLSLTPSTLPEEATGLLTPEPSKEGPILTAESETVLPSDSW :: : : :... :.. : :. .: .: . : : : . : .. :: : XP_016 TTTTVLTTMTVSTTTSVPTTTSIPTTTSVPVTTTVSTFVPPMPLPRQNHEPVATSPS-SP 180 190 200 210 220 230 240 250 260 270 280 290 pF1KE2 SSAESTSADTVLLTSKESKVWDLPSTSHVSMWKT--SDSVSSPQPGASDTAVPEQNKTTK . ::. :. .. . :..: . . : .:.:. . : XP_016 QPAETHP------TTLQGAIRREPTSSPLYSYTTDGNDTVTESSDGLWNNNQTQLFLEHS 240 250 260 270 280 300 310 320 330 340 350 pF1KE2 TGQMDGIPMSMKNEMPISQLLMIIAPSLGFVLFALFVAFLLRGKLMETYCSQKHTRLDYI XP_016 LLTANTTKGIYAGVCISVLVLLALLGVIIAKSTLEMLGKKLDLVHRWRNELHTQGLLCCP 290 300 310 320 330 340 >>NP_036338 (OMIM: 147050,606518) hepatitis A virus cell (364 aa) initn: 357 init1: 357 opt: 449 Z-score: 379.0 bits: 78.8 E(85289): 2.3e-14 Smith-Waterman score: 449; 37.5% identity (60.5% similar) in 256 aa overlap (33-281:29-272) 10 20 30 40 50 60 pF1KE2 KEPLILWLMIEFWWLYLTPVTSETVVTEVLGHRVTLPCLYSSWSHNSNSMCWGKDQCPYS : ::::: ::. .::::.. .: NP_036 MHPQVVILSLILHLADSVAGSVKVGGEAGPSVTLPCHYSG---AVTSMCWNRGSCSLF 10 20 30 40 50 70 80 90 100 110 120 pF1KE2 GCKEALIRTDGMRVTSRKSAKYRLQGTIPRGDVSLTILNPSESDSGVYCCRIEVPGWFND :..... :.: .:: ::...:.: : . : :::::: : . :::::::::.: ::::: NP_036 TCQNGIVWTNGTHVTYRKDTRYKLLGDLSRRDVSLTIENTAVSDSGVYCCRVEHRGWFND 60 70 80 90 100 110 130 140 150 160 170 pF1KE2 VKINVRLNLQRASTTTHRTATT----TTRRTTTTSPTTTR-QMTTTPAALPTTVVTTPDL .::.: :.. ..:: .:: :: ::.:: :::: :::.:.. :... : NP_036 MKITVSLEIVPPKVTTTPIVTTVPTVTTVRTSTTVPTTTTVPMTTVPTTTVPTTMSIP-- 120 130 140 150 160 170 180 190 200 210 220 230 pF1KE2 TTGTPLQMTTIAVFTTANTCLSLTPSTLPEEATGLLTPEPSKEGPILTAESETVLPSDSW :: : : :... :.. : :. .: .: . : : : . : .. :: : NP_036 TTTTVLTTMTVSTTTSVPTTTSIPTTTSVPVTTTVSTFVPPMPLPRQNHEPVATSPS-SP 180 190 200 210 220 230 240 250 260 270 280 290 pF1KE2 SSAESTSADTVLLTSKESKVWDLPSTSHVSMWKT--SDSVSSPQPGASDTAVPEQNKTTK . ::. :. .. . :..: . . : .:.:. . : NP_036 QPAETHP------TTLQGAIRREPTSSPLYSYTTDGNDTVTESSDGLWNNNQTQLFLEHS 240 250 260 270 280 300 310 320 330 340 350 pF1KE2 TGQMDGIPMSMKNEMPISQLLMIIAPSLGFVLFALFVAFLLRGKLMETYCSQKHTRLDYI NP_036 LLTANTTKGIYAGVCISVLVLLALLGVIIAKKYFFKKEVQQLSVSFSSLQIKALQNAVEK 290 300 310 320 330 340 >>NP_001166864 (OMIM: 147050,606518) hepatitis A virus c (364 aa) initn: 357 init1: 357 opt: 449 Z-score: 379.0 bits: 78.8 E(85289): 2.3e-14 Smith-Waterman score: 449; 37.5% identity (60.5% similar) in 256 aa overlap (33-281:29-272) 10 20 30 40 50 60 pF1KE2 KEPLILWLMIEFWWLYLTPVTSETVVTEVLGHRVTLPCLYSSWSHNSNSMCWGKDQCPYS : ::::: ::. .::::.. .: NP_001 MHPQVVILSLILHLADSVAGSVKVGGEAGPSVTLPCHYSG---AVTSMCWNRGSCSLF 10 20 30 40 50 70 80 90 100 110 120 pF1KE2 GCKEALIRTDGMRVTSRKSAKYRLQGTIPRGDVSLTILNPSESDSGVYCCRIEVPGWFND :..... :.: .:: ::...:.: : . : :::::: : . :::::::::.: ::::: NP_001 TCQNGIVWTNGTHVTYRKDTRYKLLGDLSRRDVSLTIENTAVSDSGVYCCRVEHRGWFND 60 70 80 90 100 110 130 140 150 160 170 pF1KE2 VKINVRLNLQRASTTTHRTATT----TTRRTTTTSPTTTR-QMTTTPAALPTTVVTTPDL .::.: :.. ..:: .:: :: ::.:: :::: :::.:.. :... : NP_001 MKITVSLEIVPPKVTTTPIVTTVPTVTTVRTSTTVPTTTTVPMTTVPTTTVPTTMSIP-- 120 130 140 150 160 170 180 190 200 210 220 230 pF1KE2 TTGTPLQMTTIAVFTTANTCLSLTPSTLPEEATGLLTPEPSKEGPILTAESETVLPSDSW :: : : :... :.. : :. .: .: . : : : . : .. :: : NP_001 TTTTVLTTMTVSTTTSVPTTTSIPTTTSVPVTTTVSTFVPPMPLPRQNHEPVATSPS-SP 180 190 200 210 220 230 240 250 260 270 280 290 pF1KE2 SSAESTSADTVLLTSKESKVWDLPSTSHVSMWKT--SDSVSSPQPGASDTAVPEQNKTTK . ::. :. .. . :..: . . : .:.:. . : NP_001 QPAETHP------TTLQGAIRREPTSSPLYSYTTDGNDTVTESSDGLWNNNQTQLFLEHS 240 250 260 270 280 300 310 320 330 340 350 pF1KE2 TGQMDGIPMSMKNEMPISQLLMIIAPSLGFVLFALFVAFLLRGKLMETYCSQKHTRLDYI NP_001 LLTANTTKGIYAGVCISVLVLLALLGVIIAKKYFFKKEVQQLSVSFSSLQIKALQNAVEK 290 300 310 320 330 340 >>NP_001295085 (OMIM: 147050,606518) hepatitis A virus c (401 aa) initn: 357 init1: 357 opt: 449 Z-score: 378.3 bits: 78.8 E(85289): 2.5e-14 Smith-Waterman score: 449; 37.5% identity (60.5% similar) in 256 aa overlap (33-281:29-272) 10 20 30 40 50 60 pF1KE2 KEPLILWLMIEFWWLYLTPVTSETVVTEVLGHRVTLPCLYSSWSHNSNSMCWGKDQCPYS : ::::: ::. .::::.. .: NP_001 MHPQVVILSLILHLADSVAGSVKVGGEAGPSVTLPCHYSG---AVTSMCWNRGSCSLF 10 20 30 40 50 70 80 90 100 110 120 pF1KE2 GCKEALIRTDGMRVTSRKSAKYRLQGTIPRGDVSLTILNPSESDSGVYCCRIEVPGWFND :..... :.: .:: ::...:.: : . : :::::: : . :::::::::.: ::::: NP_001 TCQNGIVWTNGTHVTYRKDTRYKLLGDLSRRDVSLTIENTAVSDSGVYCCRVEHRGWFND 60 70 80 90 100 110 130 140 150 160 170 pF1KE2 VKINVRLNLQRASTTTHRTATT----TTRRTTTTSPTTTR-QMTTTPAALPTTVVTTPDL .::.: :.. ..:: .:: :: ::.:: :::: :::.:.. :... : NP_001 MKITVSLEIVPPKVTTTPIVTTVPTVTTVRTSTTVPTTTTVPMTTVPTTTVPTTMSIP-- 120 130 140 150 160 170 180 190 200 210 220 230 pF1KE2 TTGTPLQMTTIAVFTTANTCLSLTPSTLPEEATGLLTPEPSKEGPILTAESETVLPSDSW :: : : :... :.. : :. .: .: . : : : . : .. :: : NP_001 TTTTVLTTMTVSTTTSVPTTTSIPTTTSVPVTTTVSTFVPPMPLPRQNHEPVATSPS-SP 180 190 200 210 220 230 240 250 260 270 280 290 pF1KE2 SSAESTSADTVLLTSKESKVWDLPSTSHVSMWKT--SDSVSSPQPGASDTAVPEQNKTTK . ::. :. .. . :..: . . : .:.:. . : NP_001 QPAETHP------TTLQGAIRREPTSSPLYSYTTDGNDTVTESSDGLWNNNQTQLFLEHS 240 250 260 270 280 300 310 320 330 340 350 pF1KE2 TGQMDGIPMSMKNEMPISQLLMIIAPSLGFVLFALFVAFLLRGKLMETYCSQKHTRLDYI NP_001 LLTANTTKGIYAGVCISVLVLLALLGVIIAKMFHLAAFKLKLCKMQLKRKSKQKTISTLR 290 300 310 320 330 340 >>XP_016864828 (OMIM: 147050,606518) PREDICTED: hepatiti (400 aa) initn: 357 init1: 357 opt: 448 Z-score: 377.5 bits: 78.6 E(85289): 2.7e-14 Smith-Waterman score: 451; 37.2% identity (63.6% similar) in 250 aa overlap (33-259:29-274) 10 20 30 40 50 60 pF1KE2 KEPLILWLMIEFWWLYLTPVTSETVVTEVLGHRVTLPCLYSSWSHNSNSMCWGKDQCPYS : ::::: ::. .::::.. .: XP_016 MHPQVVILSLILHLADSVAGSVKVGGEAGPSVTLPCHYSG---AVTSMCWNRGSCSLF 10 20 30 40 50 70 80 90 100 110 120 pF1KE2 GCKEALIRTDGMRVTSRKSAKYRLQGTIPRGDVSLTILNPSESDSGVYCCRIEVPGWFND :..... :.: .:: ::...:.: : . : :::::: : . :::::::::.: ::::: XP_016 TCQNGIVWTNGTHVTYRKDTRYKLLGDLSRRDVSLTIENTAVSDSGVYCCRVEHRGWFND 60 70 80 90 100 110 130 140 150 160 170 pF1KE2 VKINVRLNLQRASTTTHRTATT----TTRRTTTTSPTTTR-QMTTTPA-------ALPTT .::.: :.. ..:: .:: :: ::.:: :::: :::.:. ..::: XP_016 MKITVSLEIVPPKVTTTPIVTTVPTVTTVRTSTTVPTTTTVPMTTVPTTTVPTTMSIPTT 120 130 140 150 160 170 180 190 200 210 pF1KE2 VVTTPDLTTGTPLQM-TTIAVFTTANTCLSLTPST------LP----EEATGLLTPEPSK ... .:..: .. :: .. ::... .. : :: :: : ::. .:.:.. XP_016 TTVLTTMTVSTTTSVPTTTSIPTTTSVPVTTTVSTFVPPMPLPRQNHEPATSPSSPQPAE 180 190 200 210 220 230 220 230 240 250 260 270 pF1KE2 EGPILTAESETVLPSDSWSSAESTSADTVLLTSKESKVWDLPSTSHVSMWKTSDSVSSPQ : . :..: . .:... .. :... .:. XP_016 THPTTLQGAIRREPTSSPLYSYTTDGNDTVTESSDG-LWNNNQTQLFLEHSLLTANTTKG 240 250 260 270 280 290 280 290 300 310 320 330 pF1KE2 PGASDTAVPEQNKTTKTGQMDGIPMSMKNEMPISQLLMIIAPSLGFVLFALFVAFLLRGK XP_016 IYAGVCISVLVLLALLGVIIAKMFHLAAFKLKLCKMQLKRKSKQKTISTLRIVFMPRTKT 300 310 320 330 340 350 >>NP_116171 (OMIM: 606652) hepatitis A virus cellular re (301 aa) initn: 276 init1: 199 opt: 333 Z-score: 287.1 bits: 61.5 E(85289): 3e-09 Smith-Waterman score: 333; 35.6% identity (60.3% similar) in 174 aa overlap (17-189:15-180) 10 20 30 40 50 pF1KE2 MSKEPLILWLMIEFWWLYLTPVTSETVVTEVLGHRVTLPCLYSSWSH-NSNSMCWGKDQC : : .::. .:. . :::.:. . : .:::: : NP_116 MFSHLPFDCVLLLLLLLLTRSSEVEYRAEVGQNAYLPCFYTPAAPGNLVPVCWGKGAC 10 20 30 40 50 60 70 80 90 100 110 pF1KE2 PYSGCKEALIRTDGMRVTSRKSAKYRLQGTIPRGDVSLTILNPSESDSGVYCCRIEVPGW : : ....::: : .. ...: :.: . .::::::: : . .:::.:::::..:: NP_116 PVFECGNVVLRTD-ERDVNYWTSRYWLNGDFRKGDVSLTIENVTLADSGIYCCRIQIPGI 60 70 80 90 100 110 120 130 140 150 160 170 pF1KE2 FNDVKINVRLNLQRASTTTHRTATTTTRRTTTTSPTTTRQMTTTPAALPTTVVTTPDLTT .:: :.:..: .. :..: : : : :.. : :: : . . ::.. NP_116 MNDEKFNLKLVIKPAKVTP---APTRQRDFTAAFPRMLTTRGHGPAETQT-LGSLPDINL 120 130 140 150 160 170 180 190 200 210 220 230 pF1KE2 GTPLQMTTIAVFTTANTCLSLTPSTLPEEATGLLTPEPSKEGPILTAESETVLPSDSWSS :..:.: NP_116 ---TQISTLANELRDSRLANDLRDSGATIRIGIYIGAGICAGLALALIFGALIFKWYSHS 180 190 200 210 220 230 378 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Thu Nov 3 12:24:29 2016 done: Thu Nov 3 12:24:30 2016 Total Scan time: 7.540 Total Display time: -0.010 Function used was FASTA [36.3.4 Apr, 2011]