FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE2683, 1023 aa 1>>>pF1KE2683 1023 - 1023 aa - 1023 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 9.9263+/-0.000855; mu= 3.1787+/- 0.052 mean_var=279.7542+/-55.234, 0's: 0 Z-trim(116.9): 16 B-trim: 0 in 0/54 Lambda= 0.076681 statistics sampled from 17569 (17584) to 17569 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.807), E-opt: 0.2 (0.54), width: 16 Scan time: 5.970 The best scores are: opt bits E(32554) CCDS4298.1 PPARGC1B gene_id:133522|Hs108|chr5 (1023) 7071 796.0 0 CCDS54934.1 PPARGC1B gene_id:133522|Hs108|chr5 ( 959) 5768 651.8 1.9e-186 CCDS54933.1 PPARGC1B gene_id:133522|Hs108|chr5 ( 984) 5768 651.8 2e-186 CCDS73186.1 PPRC1 gene_id:23082|Hs108|chr10 (1400) 522 71.6 1.3e-11 >>CCDS4298.1 PPARGC1B gene_id:133522|Hs108|chr5 (1023 aa) initn: 7071 init1: 7071 opt: 7071 Z-score: 4239.4 bits: 796.0 E(32554): 0 Smith-Waterman score: 7071; 100.0% identity (100.0% similar) in 1023 aa overlap (1-1023:1-1023) 10 20 30 40 50 60 pF1KE2 MAGNDCGALLDEELSSFFLNYLADTQGGGSGEEQLYADFPELDLSQLDASDFDSATCFGE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS42 MAGNDCGALLDEELSSFFLNYLADTQGGGSGEEQLYADFPELDLSQLDASDFDSATCFGE 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 LQWCPENSETEPNQYSPDDSELFQIDSENEALLAELTKTLDDIPEDDVGLAAFPALDGGD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS42 LQWCPENSETEPNQYSPDDSELFQIDSENEALLAELTKTLDDIPEDDVGLAAFPALDGGD 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE2 ALSCTSASPAPSSAPPSPAPEKPSAPAPEVDELSLLQKLLLATSYPTSSSDTQKEGTAWR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS42 ALSCTSASPAPSSAPPSPAPEKPSAPAPEVDELSLLQKLLLATSYPTSSSDTQKEGTAWR 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE2 QAGLRSKSQRPCVKADSTQDKKAPMMQSQSRSCTELHKHLTSAQCCLQDRGLQPPCLQSP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS42 QAGLRSKSQRPCVKADSTQDKKAPMMQSQSRSCTELHKHLTSAQCCLQDRGLQPPCLQSP 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE2 RLPAKEDKEPGEDCPSPQPAPASPRDSLALGRADPGAPVSQEDMQAMVQLIRYMHTYCLP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS42 RLPAKEDKEPGEDCPSPQPAPASPRDSLALGRADPGAPVSQEDMQAMVQLIRYMHTYCLP 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE2 QRKLPPQTPEPLPKACSNPSQQVRSRPWSRHHSKASWAEFSILRELLAQDVLCDVSKPYR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS42 QRKLPPQTPEPLPKACSNPSQQVRSRPWSRHHSKASWAEFSILRELLAQDVLCDVSKPYR 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE2 LATPVYASLTPRSRPRPPKDSQASPGRPSSVEEVRIAASPKSTGPRPSLRPLRLEVKREV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS42 LATPVYASLTPRSRPRPPKDSQASPGRPSSVEEVRIAASPKSTGPRPSLRPLRLEVKREV 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE2 RRPARLQQQEEEDEEEEEEEEEEEKEEEEEWGRKRPGRGLPWTKLGRKLESSVCPVRRSR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS42 RRPARLQQQEEEDEEEEEEEEEEEKEEEEEWGRKRPGRGLPWTKLGRKLESSVCPVRRSR 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE2 RLNPELGPWLTFADEPLVPSEPQGALPSLCLAPKAYDVERELGSPTDEDSGQDQQLLRGP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS42 RLNPELGPWLTFADEPLVPSEPQGALPSLCLAPKAYDVERELGSPTDEDSGQDQQLLRGP 490 500 510 520 530 540 550 560 570 580 590 600 pF1KE2 QIPALESPCESGCGDMDEDPSCPQLPPRDSPRCLMLALSQSDPTFGKKSFEQTLTVELCG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS42 QIPALESPCESGCGDMDEDPSCPQLPPRDSPRCLMLALSQSDPTFGKKSFEQTLTVELCG 550 560 570 580 590 600 610 620 630 640 650 660 pF1KE2 TAGLTPPTTPPYKPTEEDPFKPDIKHSLGKEIALSLPSPEGLSLKATPGAAHKLPKKHPE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS42 TAGLTPPTTPPYKPTEEDPFKPDIKHSLGKEIALSLPSPEGLSLKATPGAAHKLPKKHPE 610 620 630 640 650 660 670 680 690 700 710 720 pF1KE2 RSELLSHLRHATAQPASQAGQKRPFSCSFGDHDYCQVLRPEGVLQRKVLRSWEPSGVHLE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS42 RSELLSHLRHATAQPASQAGQKRPFSCSFGDHDYCQVLRPEGVLQRKVLRSWEPSGVHLE 670 680 690 700 710 720 730 740 750 760 770 780 pF1KE2 DWPQQGAPWAEAQAPGREEDRSCDAGAPPKDSTLLRDHEIRASLTKHFGLLETALEEEDL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS42 DWPQQGAPWAEAQAPGREEDRSCDAGAPPKDSTLLRDHEIRASLTKHFGLLETALEEEDL 730 740 750 760 770 780 790 800 810 820 830 840 pF1KE2 ASCKSPEYDTVFEDSSSSSGESSFLPEEEEEEGEEEEEDDEEEDSGVSPTCSDHCPYQSP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS42 ASCKSPEYDTVFEDSSSSSGESSFLPEEEEEEGEEEEEDDEEEDSGVSPTCSDHCPYQSP 790 800 810 820 830 840 850 860 870 880 890 900 pF1KE2 PSKANRQLCSRSRSSSGSSPCHSWSPATRRNFRCESRGPCSDRTPSIRHARKRREKAIGE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS42 PSKANRQLCSRSRSSSGSSPCHSWSPATRRNFRCESRGPCSDRTPSIRHARKRREKAIGE 850 860 870 880 890 900 910 920 930 940 950 960 pF1KE2 GRVVYIQNLSSDMSSRELKRRFEVFGEIEECEVLTRNRRGEKYGFITYRCSEHAALSLTK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS42 GRVVYIQNLSSDMSSRELKRRFEVFGEIEECEVLTRNRRGEKYGFITYRCSEHAALSLTK 910 920 930 940 950 960 970 980 990 1000 1010 1020 pF1KE2 GAALRKRNEPSFQLSYGGLRHFCWPRYTDYDSNSEEALPASGKSKYEAMDFDSLLKEAQQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS42 GAALRKRNEPSFQLSYGGLRHFCWPRYTDYDSNSEEALPASGKSKYEAMDFDSLLKEAQQ 970 980 990 1000 1010 1020 pF1KE2 SLH ::: CCDS42 SLH >>CCDS54934.1 PPARGC1B gene_id:133522|Hs108|chr5 (959 aa) initn: 6631 init1: 5768 opt: 5768 Z-score: 3460.7 bits: 651.8 E(32554): 1.9e-186 Smith-Waterman score: 6557; 96.1% identity (96.1% similar) in 997 aa overlap (27-1023:2-959) 10 20 30 40 50 60 pF1KE2 MAGNDCGALLDEELSSFFLNYLADTQGGGSGEEQLYADFPELDLSQLDASDFDSATCFGE :::::::::::::::::::::::::::::::::: CCDS54 MGGGSGEEQLYADFPELDLSQLDASDFDSATCFGE 10 20 30 70 80 90 100 110 120 pF1KE2 LQWCPENSETEPNQYSPDDSELFQIDSENEALLAELTKTLDDIPEDDVGLAAFPALDGGD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS54 LQWCPENSETEPNQYSPDDSELFQIDSENEALLAELTKTLDDIPEDDVGLAAFPALDGGD 40 50 60 70 80 90 130 140 150 160 170 180 pF1KE2 ALSCTSASPAPSSAPPSPAPEKPSAPAPEVDELSLLQKLLLATSYPTSSSDTQKEGTAWR ::::::::::::::::::::::::::::::::::: CCDS54 ALSCTSASPAPSSAPPSPAPEKPSAPAPEVDELSL------------------------- 100 110 120 130 190 200 210 220 230 240 pF1KE2 QAGLRSKSQRPCVKADSTQDKKAPMMQSQSRSCTELHKHLTSAQCCLQDRGLQPPCLQSP :::::::::::::::::::::::::::::::::::::::::::::: CCDS54 --------------ADSTQDKKAPMMQSQSRSCTELHKHLTSAQCCLQDRGLQPPCLQSP 140 150 160 170 250 260 270 280 290 300 pF1KE2 RLPAKEDKEPGEDCPSPQPAPASPRDSLALGRADPGAPVSQEDMQAMVQLIRYMHTYCLP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS54 RLPAKEDKEPGEDCPSPQPAPASPRDSLALGRADPGAPVSQEDMQAMVQLIRYMHTYCLP 180 190 200 210 220 230 310 320 330 340 350 360 pF1KE2 QRKLPPQTPEPLPKACSNPSQQVRSRPWSRHHSKASWAEFSILRELLAQDVLCDVSKPYR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS54 QRKLPPQTPEPLPKACSNPSQQVRSRPWSRHHSKASWAEFSILRELLAQDVLCDVSKPYR 240 250 260 270 280 290 370 380 390 400 410 420 pF1KE2 LATPVYASLTPRSRPRPPKDSQASPGRPSSVEEVRIAASPKSTGPRPSLRPLRLEVKREV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS54 LATPVYASLTPRSRPRPPKDSQASPGRPSSVEEVRIAASPKSTGPRPSLRPLRLEVKREV 300 310 320 330 340 350 430 440 450 460 470 480 pF1KE2 RRPARLQQQEEEDEEEEEEEEEEEKEEEEEWGRKRPGRGLPWTKLGRKLESSVCPVRRSR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS54 RRPARLQQQEEEDEEEEEEEEEEEKEEEEEWGRKRPGRGLPWTKLGRKLESSVCPVRRSR 360 370 380 390 400 410 490 500 510 520 530 540 pF1KE2 RLNPELGPWLTFADEPLVPSEPQGALPSLCLAPKAYDVERELGSPTDEDSGQDQQLLRGP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS54 RLNPELGPWLTFADEPLVPSEPQGALPSLCLAPKAYDVERELGSPTDEDSGQDQQLLRGP 420 430 440 450 460 470 550 560 570 580 590 600 pF1KE2 QIPALESPCESGCGDMDEDPSCPQLPPRDSPRCLMLALSQSDPTFGKKSFEQTLTVELCG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS54 QIPALESPCESGCGDMDEDPSCPQLPPRDSPRCLMLALSQSDPTFGKKSFEQTLTVELCG 480 490 500 510 520 530 610 620 630 640 650 660 pF1KE2 TAGLTPPTTPPYKPTEEDPFKPDIKHSLGKEIALSLPSPEGLSLKATPGAAHKLPKKHPE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS54 TAGLTPPTTPPYKPTEEDPFKPDIKHSLGKEIALSLPSPEGLSLKATPGAAHKLPKKHPE 540 550 560 570 580 590 670 680 690 700 710 720 pF1KE2 RSELLSHLRHATAQPASQAGQKRPFSCSFGDHDYCQVLRPEGVLQRKVLRSWEPSGVHLE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS54 RSELLSHLRHATAQPASQAGQKRPFSCSFGDHDYCQVLRPEGVLQRKVLRSWEPSGVHLE 600 610 620 630 640 650 730 740 750 760 770 780 pF1KE2 DWPQQGAPWAEAQAPGREEDRSCDAGAPPKDSTLLRDHEIRASLTKHFGLLETALEEEDL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS54 DWPQQGAPWAEAQAPGREEDRSCDAGAPPKDSTLLRDHEIRASLTKHFGLLETALEEEDL 660 670 680 690 700 710 790 800 810 820 830 840 pF1KE2 ASCKSPEYDTVFEDSSSSSGESSFLPEEEEEEGEEEEEDDEEEDSGVSPTCSDHCPYQSP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS54 ASCKSPEYDTVFEDSSSSSGESSFLPEEEEEEGEEEEEDDEEEDSGVSPTCSDHCPYQSP 720 730 740 750 760 770 850 860 870 880 890 900 pF1KE2 PSKANRQLCSRSRSSSGSSPCHSWSPATRRNFRCESRGPCSDRTPSIRHARKRREKAIGE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS54 PSKANRQLCSRSRSSSGSSPCHSWSPATRRNFRCESRGPCSDRTPSIRHARKRREKAIGE 780 790 800 810 820 830 910 920 930 940 950 960 pF1KE2 GRVVYIQNLSSDMSSRELKRRFEVFGEIEECEVLTRNRRGEKYGFITYRCSEHAALSLTK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS54 GRVVYIQNLSSDMSSRELKRRFEVFGEIEECEVLTRNRRGEKYGFITYRCSEHAALSLTK 840 850 860 870 880 890 970 980 990 1000 1010 1020 pF1KE2 GAALRKRNEPSFQLSYGGLRHFCWPRYTDYDSNSEEALPASGKSKYEAMDFDSLLKEAQQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS54 GAALRKRNEPSFQLSYGGLRHFCWPRYTDYDSNSEEALPASGKSKYEAMDFDSLLKEAQQ 900 910 920 930 940 950 pF1KE2 SLH ::: CCDS54 SLH >>CCDS54933.1 PPARGC1B gene_id:133522|Hs108|chr5 (984 aa) initn: 6803 init1: 5768 opt: 5768 Z-score: 3460.6 bits: 651.8 E(32554): 2e-186 Smith-Waterman score: 6729; 96.2% identity (96.2% similar) in 1023 aa overlap (1-1023:1-984) 10 20 30 40 50 60 pF1KE2 MAGNDCGALLDEELSSFFLNYLADTQGGGSGEEQLYADFPELDLSQLDASDFDSATCFGE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS54 MAGNDCGALLDEELSSFFLNYLADTQGGGSGEEQLYADFPELDLSQLDASDFDSATCFGE 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 LQWCPENSETEPNQYSPDDSELFQIDSENEALLAELTKTLDDIPEDDVGLAAFPALDGGD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS54 LQWCPENSETEPNQYSPDDSELFQIDSENEALLAELTKTLDDIPEDDVGLAAFPALDGGD 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE2 ALSCTSASPAPSSAPPSPAPEKPSAPAPEVDELSLLQKLLLATSYPTSSSDTQKEGTAWR ::::::::::::::::::::::::::::::::::: CCDS54 ALSCTSASPAPSSAPPSPAPEKPSAPAPEVDELSL------------------------- 130 140 150 190 200 210 220 230 240 pF1KE2 QAGLRSKSQRPCVKADSTQDKKAPMMQSQSRSCTELHKHLTSAQCCLQDRGLQPPCLQSP :::::::::::::::::::::::::::::::::::::::::::::: CCDS54 --------------ADSTQDKKAPMMQSQSRSCTELHKHLTSAQCCLQDRGLQPPCLQSP 160 170 180 190 200 250 260 270 280 290 300 pF1KE2 RLPAKEDKEPGEDCPSPQPAPASPRDSLALGRADPGAPVSQEDMQAMVQLIRYMHTYCLP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS54 RLPAKEDKEPGEDCPSPQPAPASPRDSLALGRADPGAPVSQEDMQAMVQLIRYMHTYCLP 210 220 230 240 250 260 310 320 330 340 350 360 pF1KE2 QRKLPPQTPEPLPKACSNPSQQVRSRPWSRHHSKASWAEFSILRELLAQDVLCDVSKPYR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS54 QRKLPPQTPEPLPKACSNPSQQVRSRPWSRHHSKASWAEFSILRELLAQDVLCDVSKPYR 270 280 290 300 310 320 370 380 390 400 410 420 pF1KE2 LATPVYASLTPRSRPRPPKDSQASPGRPSSVEEVRIAASPKSTGPRPSLRPLRLEVKREV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS54 LATPVYASLTPRSRPRPPKDSQASPGRPSSVEEVRIAASPKSTGPRPSLRPLRLEVKREV 330 340 350 360 370 380 430 440 450 460 470 480 pF1KE2 RRPARLQQQEEEDEEEEEEEEEEEKEEEEEWGRKRPGRGLPWTKLGRKLESSVCPVRRSR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS54 RRPARLQQQEEEDEEEEEEEEEEEKEEEEEWGRKRPGRGLPWTKLGRKLESSVCPVRRSR 390 400 410 420 430 440 490 500 510 520 530 540 pF1KE2 RLNPELGPWLTFADEPLVPSEPQGALPSLCLAPKAYDVERELGSPTDEDSGQDQQLLRGP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS54 RLNPELGPWLTFADEPLVPSEPQGALPSLCLAPKAYDVERELGSPTDEDSGQDQQLLRGP 450 460 470 480 490 500 550 560 570 580 590 600 pF1KE2 QIPALESPCESGCGDMDEDPSCPQLPPRDSPRCLMLALSQSDPTFGKKSFEQTLTVELCG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS54 QIPALESPCESGCGDMDEDPSCPQLPPRDSPRCLMLALSQSDPTFGKKSFEQTLTVELCG 510 520 530 540 550 560 610 620 630 640 650 660 pF1KE2 TAGLTPPTTPPYKPTEEDPFKPDIKHSLGKEIALSLPSPEGLSLKATPGAAHKLPKKHPE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS54 TAGLTPPTTPPYKPTEEDPFKPDIKHSLGKEIALSLPSPEGLSLKATPGAAHKLPKKHPE 570 580 590 600 610 620 670 680 690 700 710 720 pF1KE2 RSELLSHLRHATAQPASQAGQKRPFSCSFGDHDYCQVLRPEGVLQRKVLRSWEPSGVHLE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS54 RSELLSHLRHATAQPASQAGQKRPFSCSFGDHDYCQVLRPEGVLQRKVLRSWEPSGVHLE 630 640 650 660 670 680 730 740 750 760 770 780 pF1KE2 DWPQQGAPWAEAQAPGREEDRSCDAGAPPKDSTLLRDHEIRASLTKHFGLLETALEEEDL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS54 DWPQQGAPWAEAQAPGREEDRSCDAGAPPKDSTLLRDHEIRASLTKHFGLLETALEEEDL 690 700 710 720 730 740 790 800 810 820 830 840 pF1KE2 ASCKSPEYDTVFEDSSSSSGESSFLPEEEEEEGEEEEEDDEEEDSGVSPTCSDHCPYQSP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS54 ASCKSPEYDTVFEDSSSSSGESSFLPEEEEEEGEEEEEDDEEEDSGVSPTCSDHCPYQSP 750 760 770 780 790 800 850 860 870 880 890 900 pF1KE2 PSKANRQLCSRSRSSSGSSPCHSWSPATRRNFRCESRGPCSDRTPSIRHARKRREKAIGE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS54 PSKANRQLCSRSRSSSGSSPCHSWSPATRRNFRCESRGPCSDRTPSIRHARKRREKAIGE 810 820 830 840 850 860 910 920 930 940 950 960 pF1KE2 GRVVYIQNLSSDMSSRELKRRFEVFGEIEECEVLTRNRRGEKYGFITYRCSEHAALSLTK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS54 GRVVYIQNLSSDMSSRELKRRFEVFGEIEECEVLTRNRRGEKYGFITYRCSEHAALSLTK 870 880 890 900 910 920 970 980 990 1000 1010 1020 pF1KE2 GAALRKRNEPSFQLSYGGLRHFCWPRYTDYDSNSEEALPASGKSKYEAMDFDSLLKEAQQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS54 GAALRKRNEPSFQLSYGGLRHFCWPRYTDYDSNSEEALPASGKSKYEAMDFDSLLKEAQQ 930 940 950 960 970 980 pF1KE2 SLH ::: CCDS54 SLH >>CCDS73186.1 PPRC1 gene_id:23082|Hs108|chr10 (1400 aa) initn: 592 init1: 278 opt: 522 Z-score: 322.0 bits: 71.6 E(32554): 1.3e-11 Smith-Waterman score: 577; 27.1% identity (47.6% similar) in 860 aa overlap (256-1022:579-1398) 230 240 250 260 270 280 pF1KE2 CLQDRGLQPPCLQSPRLPAKEDKEPGEDCPSPQPAPASPRDSLALGRADPGA--PVSQED : : .: : ::. .::: : :: CCDS73 PAKEGPLDLYPKLADTIQTNPIPTHLSLVDSAQASPM-PVDSV---EADPTAVGPVLAGP 550 560 570 580 590 600 290 300 310 320 330 340 pF1KE2 MQAMVQLIRYMHTYCLPQRKLPPQTPEPLPKACSNPSQQVRSRPWSRHHSKASWAEFSIL . . :. : . :::: .. : : . .. : : CCDS73 VPVDPGLVDLAST--------SSELVEPLP------AEPVLINPVLADSAAVDPAVVPIS 610 620 630 640 650 350 360 370 380 390 pF1KE2 RELLAQDVLCDVSKPYRLAT--PVYASLTP------RSRPRPPKDSQASPGRPSSVEEVR .: :.. . : :: :: .::: .::: :. . .: . .:. .. CCDS73 DNLPPVDAVPSGPAPVDLALVDPVPNDLTPVDPVLVKSRPTDPRRGAVSSALGGSAPQLL 660 670 680 690 700 710 400 410 420 430 440 pF1KE2 IAAS----PKSTGP--RPSLRPLRLEVKREVR----RPARLQQQEEEDEEEEEEEEEEEK . . ::. : . . :..: . :: :. .: . ...... : ::. CCDS73 VESESLDPPKTIIPEVKEVVDSLKIESGTSATTHEARPRPLSLSEYRRRRQQRQAETEER 720 730 740 750 760 770 450 460 470 480 490 500 pF1KE2 EEEEEWGRKRPGRGLPWTKLG-RKLESSVCPVRRSRRLNPELGPWLTFADEPLVPSEPQG . : : : .:: : : . : : ... . .: : . ::: :. CCDS73 SPQPPTG-KWP--SLPETPTGLADIPCLVIPPAPAKKTALQRSPE-TPLEICLVPVGPSP 780 790 800 810 820 510 520 530 540 550 pF1KE2 ALPSLCLAPKAYDVERELGSPTDEDSGQDQQLLRGPQIP------ALESPCESGC----- : :: :. . .:::.. .:.. :: :. : :. .: . CCDS73 ASPS----PEPPVSKPVASSPTEQVPSQEMPLLARPSPPVQSVSPAVPTPPSMSAALPFP 830 840 850 860 870 880 560 570 580 590 pF1KE2 -GDMDEDPSCPQLPPRDSPRCLMLALSQ--SDPTF-----------------GKKSFEQT : . :: : :: .: : :... :: : . CCDS73 AGGLGMPPSLP--PPPLQPPSLPLSMGPVLPDPFTHYAPLPSWPCYPHVSPSGYPCLPPP 890 900 910 920 930 940 600 610 620 630 pF1KE2 LTVELC-GTAGL--TPPT-----TPPYKPTEEDPFK-----------PDIKHSLGKEIAL :: : :: : .::: .:: :. .:.. : .:. . CCDS73 PTVPLVSGTPGAYAVPPTCSVPWAPP--PAPVSPYSSTCTYGPLGWGPGPQHAPFWSTVP 950 960 970 980 990 640 650 660 670 680 pF1KE2 SLPSPEGLSLKATPGAAHK---LPKKHPERSELLSHLRHAT-AQPASQAGQKRPFSCSF- : : . .:.: . : :: :: . . :. : : .: . CCDS73 PPPLPPASIGRAVPQPKMESRGTPAGPPENVLPLSMAPPLSLGLPGHGAPQTEPTKVEVK 1000 1010 1020 1030 1040 1050 690 700 710 720 730 740 pF1KE2 ----GDHDYCQVLRPEGVLQRKVLRSWEPSGVHLEDWP--QQGAPWAEAQAPGREEDRSC . : .: : :.: :: .:. : .. : .. : .. CCDS73 PVPASPHPKHKVSALVQSPQMKALACVSAEGVTVEE-PASERLKPETQETRPREKPPLPA 1060 1070 1080 1090 1100 1110 750 760 770 780 790 800 pF1KE2 DAGAP-PKDSTLLRDHEIRASLTKHFGLLETALEE--EDLASCKSPEYDTVFEDSSSSSG ..: :..::. . .. . .....: : . ::... . : . .: CCDS73 TKAVPTPRQSTVPKLPAVHPARLRKLSFLPTPRTQGSEDVVQA------FISEIGIEASD 1120 1130 1140 1150 1160 1170 810 820 830 840 850 pF1KE2 ESSFLPEEEEEEGEEEEEDDEEEDS---GVS-PTCSDHC-PYQSPPSKANRQLCSRSRSS ::.: . :. :...: :: : : .::. . :... . : : :: CCDS73 LSSLLEQFEKSEAKKECPPPAPADSLAVGNSGSSCSSSGRSRRCSSSSSSSSSSSSSSSS 1180 1190 1200 1210 1220 1230 860 870 880 890 900 910 pF1KE2 SGSSPCHSWSPATRRNFRCESRGPCSDRTPSIRHARKR---REKAIGEGRVVYIQNLSSD :.:: .: ::. :: : . : :. .. :.: .:.:: : :::.: .. . CCDS73 SSSSRSRSRSPSPRR--RSDRRRRYSSYRSHDHYQRQRVLQKERAIEERRVVFIGKIPGR 1240 1250 1260 1270 1280 920 930 940 950 960 970 pF1KE2 MSSRELKRRFEVFGEIEECEVLTRNRRGEKYGFITYRCSEHAALSLTKGAALRKRNEPSF :. :::.:: :::::::: . : . :..:::.::: .:.: .. .: ::. .: : CCDS73 MTRSELKQRFSVFGEIEECTIHFRVQ-GDNYGFVTYRYAEEAFAAIESGHKLRQADEQPF 1290 1300 1310 1320 1330 1340 980 990 1000 1010 1020 pF1KE2 QLSYGGLRHFCWPRYTDYDSNSEEALPASGKSKYEAMDFDSLLKEAQQSLH .: .:: :.:: :.: ::: :. :: :::....:::.:::.::..: CCDS73 DLCFGGRRQFCKRSYSDLDSNREDFDPAPVKSKFDSLDFDTLLKQAQKNLRR 1350 1360 1370 1380 1390 1400 1023 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Wed Mar 22 11:42:48 2017 done: Wed Mar 22 11:42:49 2017 Total Scan time: 5.970 Total Display time: 0.180 Function used was FASTA [36.3.4 Apr, 2011]