FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE6540, 85 aa 1>>>pF1KE6540 85 - 85 aa - 85 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 4.7850+/-0.000549; mu= 11.4394+/- 0.033 mean_var=64.6632+/-12.862, 0's: 0 Z-trim(113.6): 37 B-trim: 0 in 0/51 Lambda= 0.159494 statistics sampled from 14159 (14196) to 14159 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.809), E-opt: 0.2 (0.436), width: 16 Scan time: 1.260 The best scores are: opt bits E(32554) CCDS4289.1 SPINK7 gene_id:84651|Hs108|chr5 ( 85) 594 144.0 1.1e-35 >>CCDS4289.1 SPINK7 gene_id:84651|Hs108|chr5 (85 aa) initn: 594 init1: 594 opt: 594 Z-score: 754.5 bits: 144.0 E(32554): 1.1e-35 Smith-Waterman score: 594; 100.0% identity (100.0% similar) in 85 aa overlap (1-85:1-85) 10 20 30 40 50 60 pF1KE6 MKITGGLLLLCTVVYFCSSSEAASLSPKKVDCSIYKKYPVVAIPCPITYLPVCGSDYITY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS42 MKITGGLLLLCTVVYFCSSSEAASLSPKKVDCSIYKKYPVVAIPCPITYLPVCGSDYITY 10 20 30 40 50 60 70 80 pF1KE6 GNECHLCTESLKSNGRVQFLHDGSC ::::::::::::::::::::::::: CCDS42 GNECHLCTESLKSNGRVQFLHDGSC 70 80 85 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 14:14:23 2016 done: Tue Nov 8 14:14:23 2016 Total Scan time: 1.260 Total Display time: -0.040 Function used was FASTA [36.3.4 Apr, 2011]