FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KB6744, 144 aa 1>>>pF1KB6744 144 - 144 aa - 144 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.0924+/-0.000318; mu= 12.9348+/- 0.020 mean_var=68.5480+/-13.208, 0's: 0 Z-trim(116.5): 5 B-trim: 0 in 0/53 Lambda= 0.154909 statistics sampled from 27641 (27646) to 27641 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.704), E-opt: 0.2 (0.324), width: 16 Scan time: 5.120 The best scores are: opt bits E(85289) NP_000581 (OMIM: 146931) interleukin-9 precursor [ ( 144) 976 226.4 1.3e-59 >>NP_000581 (OMIM: 146931) interleukin-9 precursor [Homo (144 aa) initn: 976 init1: 976 opt: 976 Z-score: 1191.4 bits: 226.4 E(85289): 1.3e-59 Smith-Waterman score: 976; 100.0% identity (100.0% similar) in 144 aa overlap (1-144:1-144) 10 20 30 40 50 60 pF1KB6 MLLAMVLTSALLLCSVAGQGCPTLAGILDINFLINKMQEDPASKCHCSANVTSCLCLGIP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_000 MLLAMVLTSALLLCSVAGQGCPTLAGILDINFLINKMQEDPASKCHCSANVTSCLCLGIP 10 20 30 40 50 60 70 80 90 100 110 120 pF1KB6 SDNCTRPCFSERLSQMTNTTMQTRYPLIFSRVKKSVEVLKNNKCPYFSCEQPCNQTTAGN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_000 SDNCTRPCFSERLSQMTNTTMQTRYPLIFSRVKKSVEVLKNNKCPYFSCEQPCNQTTAGN 70 80 90 100 110 120 130 140 pF1KB6 ALTFLKSLLEIFQKEKMRGMRGKI :::::::::::::::::::::::: NP_000 ALTFLKSLLEIFQKEKMRGMRGKI 130 140 144 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 22:21:52 2016 done: Mon Nov 7 22:21:53 2016 Total Scan time: 5.120 Total Display time: -0.050 Function used was FASTA [36.3.4 Apr, 2011]