FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE1789, 296 aa 1>>>pF1KE1789 296 - 296 aa - 296 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.8089+/-0.000753; mu= 13.1605+/- 0.046 mean_var=75.5080+/-14.909, 0's: 0 Z-trim(109.3): 9 B-trim: 0 in 0/51 Lambda= 0.147597 statistics sampled from 10791 (10794) to 10791 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.711), E-opt: 0.2 (0.332), width: 16 Scan time: 2.680 The best scores are: opt bits E(32554) CCDS4178.1 CAMLG gene_id:819|Hs108|chr5 ( 296) 1926 419.1 1.9e-117 >>CCDS4178.1 CAMLG gene_id:819|Hs108|chr5 (296 aa) initn: 1926 init1: 1926 opt: 1926 Z-score: 2221.9 bits: 419.1 E(32554): 1.9e-117 Smith-Waterman score: 1926; 100.0% identity (100.0% similar) in 296 aa overlap (1-296:1-296) 10 20 30 40 50 60 pF1KE1 MESMAVATDGGERPGVPAGSGLSASQRRAELRRRKLLMNSEQRINRIMGFHRPGSGAEEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS41 MESMAVATDGGERPGVPAGSGLSASQRRAELRRRKLLMNSEQRINRIMGFHRPGSGAEEE 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 SQTKSKQQDSDKLNSLSVPSVSKRVVLGDSVSTGTTDQQGGVAEVKGTQLGDKLDSFIKP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS41 SQTKSKQQDSDKLNSLSVPSVSKRVVLGDSVSTGTTDQQGGVAEVKGTQLGDKLDSFIKP 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 PECSSDVNLELRQRNRGDLTADSVQRGSRHGLEQYLSRFEEAMKLRKQLISEKPSQEDGN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS41 PECSSDVNLELRQRNRGDLTADSVQRGSRHGLEQYLSRFEEAMKLRKQLISEKPSQEDGN 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 TTEEFDSFRIFRLVGCALLALGVRAFVCKYLSIFAPFLTLQLAYMGLYKYFPKSEKKIKT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS41 TTEEFDSFRIFRLVGCALLALGVRAFVCKYLSIFAPFLTLQLAYMGLYKYFPKSEKKIKT 190 200 210 220 230 240 250 260 270 280 290 pF1KE1 TVLTAALLLSGIPAEVINRSMDTYSKMGEVFTDLCVYFFTFIFCHELLDYWGSEVP :::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS41 TVLTAALLLSGIPAEVINRSMDTYSKMGEVFTDLCVYFFTFIFCHELLDYWGSEVP 250 260 270 280 290 296 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 17:08:54 2016 done: Sun Nov 6 17:08:54 2016 Total Scan time: 2.680 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]