FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE6644, 242 aa 1>>>pF1KE6644 242 - 242 aa - 242 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.7066+/-0.000707; mu= 14.4947+/- 0.043 mean_var=94.3293+/-18.686, 0's: 0 Z-trim(111.9): 10 B-trim: 0 in 0/51 Lambda= 0.132054 statistics sampled from 12729 (12735) to 12729 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.757), E-opt: 0.2 (0.391), width: 16 Scan time: 1.600 The best scores are: opt bits E(32554) CCDS4128.1 FTMT gene_id:94033|Hs108|chr5 ( 242) 1644 322.5 1.6e-88 CCDS41655.1 FTH1 gene_id:2495|Hs108|chr11 ( 183) 981 196.1 1.3e-50 CCDS14227.1 FTHL17 gene_id:53940|Hs108|chrX ( 183) 752 152.5 1.8e-37 CCDS33070.1 FTL gene_id:2512|Hs108|chr19 ( 175) 654 133.8 7.4e-32 >>CCDS4128.1 FTMT gene_id:94033|Hs108|chr5 (242 aa) initn: 1644 init1: 1644 opt: 1644 Z-score: 1702.8 bits: 322.5 E(32554): 1.6e-88 Smith-Waterman score: 1644; 100.0% identity (100.0% similar) in 242 aa overlap (1-242:1-242) 10 20 30 40 50 60 pF1KE6 MLSCFRLLSRHISPSLASLRPVRCCFALPLRWAPGRPLDPRQIAPRRPLAAAASSRDPTG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS41 MLSCFRLLSRHISPSLASLRPVRCCFALPLRWAPGRPLDPRQIAPRRPLAAAASSRDPTG 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 PAAGPSRVRQNFHPDSEAAINRQINLELYASYVYLSMAYYFSRDDVALNNFSRYFLHQSR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS41 PAAGPSRVRQNFHPDSEAAINRQINLELYASYVYLSMAYYFSRDDVALNNFSRYFLHQSR 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE6 EETEHAEKLMRLQNQRGGRIRLQDIKKPEQDDWESGLHAMECALLLEKNVNQSLLELHAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS41 EETEHAEKLMRLQNQRGGRIRLQDIKKPEQDDWESGLHAMECALLLEKNVNQSLLELHAL 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE6 ASDKGDPHLCDFLETYYLNEQVKSIKELGDHVHNLVKMGAPDAGLAEYLFDTHTLGNENK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS41 ASDKGDPHLCDFLETYYLNEQVKSIKELGDHVHNLVKMGAPDAGLAEYLFDTHTLGNENK 190 200 210 220 230 240 pF1KE6 QN :: CCDS41 QN >>CCDS41655.1 FTH1 gene_id:2495|Hs108|chr11 (183 aa) initn: 986 init1: 971 opt: 981 Z-score: 1021.8 bits: 196.1 E(32554): 1.3e-50 Smith-Waterman score: 981; 80.6% identity (93.9% similar) in 180 aa overlap (63-242:4-183) 40 50 60 70 80 90 pF1KE6 APGRPLDPRQIAPRRPLAAAASSRDPTGPAAGPSRVRQNFHPDSEAAINRQINLELYASY :. :.::::.: :::::::::::::::::: CCDS41 MTTASTSQVRQNYHQDSEAAINRQINLELYASY 10 20 30 100 110 120 130 140 150 pF1KE6 VYLSMAYYFSRDDVALNNFSRYFLHQSREETEHAEKLMRLQNQRGGRIRLQDIKKPEQDD :::::.:::.::::::.::..::::::.:: :::::::.::::::::: :::::::. :: CCDS41 VYLSMSYYFDRDDVALKNFAKYFLHQSHEEREHAEKLMKLQNQRGGRIFLQDIKKPDCDD 40 50 60 70 80 90 160 170 180 190 200 210 pF1KE6 WESGLHAMECALLLEKNVNQSLLELHALASDKGDPHLCDFLETYYLNEQVKSIKELGDHV :::::.:::::: ::::::::::::: ::.::.:::::::.::.:::::::.:::::::: CCDS41 WESGLNAMECALHLEKNVNQSLLELHKLATDKNDPHLCDFIETHYLNEQVKAIKELGDHV 100 110 120 130 140 150 220 230 240 pF1KE6 HNLVKMGAPDAGLAEYLFDTHTLGNENKQN :: :::::..:::::::: ::::. .... CCDS41 TNLRKMGAPESGLAEYLFDKHTLGDSDNES 160 170 180 >>CCDS14227.1 FTHL17 gene_id:53940|Hs108|chrX (183 aa) initn: 765 init1: 749 opt: 752 Z-score: 786.1 bits: 152.5 E(32554): 1.8e-37 Smith-Waterman score: 752; 65.4% identity (85.5% similar) in 179 aa overlap (63-241:4-182) 40 50 60 70 80 90 pF1KE6 APGRPLDPRQIAPRRPLAAAASSRDPTGPAAGPSRVRQNFHPDSEAAINRQINLELYASY : ::.:::.. . .:::: .:.::::.:: CCDS14 MATAQPSQVRQKYDTNCDAAINSHITLELYTSY 10 20 30 100 110 120 130 140 150 pF1KE6 VYLSMAYYFSRDDVALNNFSRYFLHQSREETEHAEKLMRLQNQRGGRIRLQDIKKPEQDD .:::::.::.::::::.:: ::::. : .. :::.::::::: :::.: :.::.::: . CCDS14 LYLSMAFYFNRDDVALENFFRYFLRLSDDKMEHAQKLMRLQNLRGGHICLHDIRKPECQG 40 50 60 70 80 90 160 170 180 190 200 210 pF1KE6 WESGLHAMECALLLEKNVNQSLLELHALASDKGDPHLCDFLETYYLNEQVKSIKELGDHV ::::: ::: :. ::::::::::.:. :: .::::.:: :::..::.::::.::::: .: CCDS14 WESGLVAMESAFHLEKNVNQSLLDLYQLAVEKGDPQLCHFLESHYLHEQVKTIKELGGYV 100 110 120 130 140 150 220 230 240 pF1KE6 HNLVKMGAPDAGLAEYLFDTHTLGNENKQN :: :. .:.::::::::: :::.. :. CCDS14 SNLRKICSPEAGLAEYLFDKLTLGGRVKET 160 170 180 >>CCDS33070.1 FTL gene_id:2512|Hs108|chr19 (175 aa) initn: 660 init1: 644 opt: 654 Z-score: 685.4 bits: 133.8 E(32554): 7.4e-32 Smith-Waterman score: 654; 54.3% identity (82.7% similar) in 173 aa overlap (66-238:3-175) 40 50 60 70 80 90 pF1KE6 RPLDPRQIAPRRPLAAAASSRDPTGPAAGPSRVRQNFHPDSEAAINRQINLELYASYVYL :..:::. : :::.: .:: : :::.:: CCDS33 MSSQIRQNYSTDVEAAVNSLVNLYLQASYTYL 10 20 30 100 110 120 130 140 150 pF1KE6 SMAYYFSRDDVALNNFSRYFLHQSREETEHAEKLMRLQNQRGGRIRLQDIKKPEQDDWES :...::.::::::.. :..: . ..:. : :.:...::::::: .:::::: .:.: . CCDS33 SLGFYFDRDDVALEGVSHFFRELAEEKREGYERLLKMQNQRGGRALFQDIKKPAEDEWGK 40 50 60 70 80 90 160 170 180 190 200 210 pF1KE6 GLHAMECALLLEKNVNQSLLELHALASDKGDPHLCDFLETYYLNEQVKSIKELGDHVHNL ::. :. :::..::.::.::::.: . ::::::::::..:.:.:: ::..:::. :: CCDS33 TPDAMKAAMALEKKLNQALLDLHALGSARTDPHLCDFLETHFLDEEVKLIKKMGDHLTNL 100 110 120 130 140 150 220 230 240 pF1KE6 VKMGAPDAGLAEYLFDTHTLGNENKQN ..:.:.:::.::::. :: .. CCDS33 HRLGGPEAGLGEYLFERLTLKHD 160 170 242 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 15:03:55 2016 done: Tue Nov 8 15:03:55 2016 Total Scan time: 1.600 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]