FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE1667, 187 aa 1>>>pF1KE1667 187 - 187 aa - 187 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 6.8618+/-0.000644; mu= 6.9986+/- 0.039 mean_var=100.2105+/-20.212, 0's: 0 Z-trim(114.3): 3 B-trim: 296 in 2/49 Lambda= 0.128120 statistics sampled from 14919 (14921) to 14919 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.801), E-opt: 0.2 (0.458), width: 16 Scan time: 1.990 The best scores are: opt bits E(32554) CCDS4122.2 ATG12 gene_id:9140|Hs108|chr5 ( 140) 921 179.3 9e-46 CCDS64222.1 ATG12 gene_id:9140|Hs108|chr5 ( 74) 358 75.1 1.1e-14 >>CCDS4122.2 ATG12 gene_id:9140|Hs108|chr5 (140 aa) initn: 921 init1: 921 opt: 921 Z-score: 935.3 bits: 179.3 E(32554): 9e-46 Smith-Waterman score: 921; 100.0% identity (100.0% similar) in 140 aa overlap (48-187:1-140) 20 30 40 50 60 70 pF1KE1 RRLLCDAPWRKARPLHALSRYFRSRVSPSKMAEEPQSVLQLPTSIAAGGEGLTDVSPETT :::::::::::::::::::::::::::::: CCDS41 MAEEPQSVLQLPTSIAAGGEGLTDVSPETT 10 20 30 80 90 100 110 120 130 pF1KE1 TPEPPSSAAVSPGTEEPAGDTKKKIDILLKAVGDTPIMKTKKWAVERTRTIQGLIDFIKK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS41 TPEPPSSAAVSPGTEEPAGDTKKKIDILLKAVGDTPIMKTKKWAVERTRTIQGLIDFIKK 40 50 60 70 80 90 140 150 160 170 180 pF1KE1 FLKLVASEQLFIYVNQSFAPSPDQEVGTLYECFGSDGKLVLHYCKSQAWG :::::::::::::::::::::::::::::::::::::::::::::::::: CCDS41 FLKLVASEQLFIYVNQSFAPSPDQEVGTLYECFGSDGKLVLHYCKSQAWG 100 110 120 130 140 >>CCDS64222.1 ATG12 gene_id:9140|Hs108|chr5 (74 aa) initn: 352 init1: 352 opt: 358 Z-score: 377.2 bits: 75.1 E(32554): 1.1e-14 Smith-Waterman score: 358; 78.1% identity (89.0% similar) in 73 aa overlap (48-120:1-71) 20 30 40 50 60 70 pF1KE1 RRLLCDAPWRKARPLHALSRYFRSRVSPSKMAEEPQSVLQLPTSIAAGGEGLTDVSPETT :::::::::::::::::::::::::::::: CCDS64 MAEEPQSVLQLPTSIAAGGEGLTDVSPETT 10 20 30 80 90 100 110 120 130 pF1KE1 TPEPPSSAAVSPGTEEPAGDTKKKIDILLKAVGDTPIMKTKKWAVERTRTIQGLIDFIKK ::::::::::::::::::::::::: . ... . : . ..: CCDS64 TPEPPSSAAVSPGTEEPAGDTKKKIYLCESVLCSFP--RPRSWNSL 40 50 60 70 140 150 160 170 180 pF1KE1 FLKLVASEQLFIYVNQSFAPSPDQEVGTLYECFGSDGKLVLHYCKSQAWG 187 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 17:10:02 2016 done: Sun Nov 6 17:10:03 2016 Total Scan time: 1.990 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]