FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE3018, 116 aa 1>>>pF1KE3018 116 - 116 aa - 116 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 4.9733+/-0.000601; mu= 12.8794+/- 0.036 mean_var=65.7854+/-12.604, 0's: 0 Z-trim(112.5): 4 B-trim: 47 in 1/51 Lambda= 0.158128 statistics sampled from 13289 (13291) to 13289 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.789), E-opt: 0.2 (0.408), width: 16 Scan time: 1.480 The best scores are: opt bits E(32554) CCDS4011.1 CARTPT gene_id:9607|Hs108|chr5 ( 116) 767 182.5 5.1e-47 >>CCDS4011.1 CARTPT gene_id:9607|Hs108|chr5 (116 aa) initn: 767 init1: 767 opt: 767 Z-score: 957.6 bits: 182.5 E(32554): 5.1e-47 Smith-Waterman score: 767; 100.0% identity (100.0% similar) in 116 aa overlap (1-116:1-116) 10 20 30 40 50 60 pF1KE3 MESSRVRLLPLLGAALLLMLPLLGTRAQEDAELQPRALDIYSAVDDASHEKELIEALQEV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS40 MESSRVRLLPLLGAALLLMLPLLGTRAQEDAELQPRALDIYSAVDDASHEKELIEALQEV 10 20 30 40 50 60 70 80 90 100 110 pF1KE3 LKKLKSKRVPIYEKKYGQVPMCDAGEQCAVRKGARIGKLCDCPRGTSCNSFLLKCL :::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS40 LKKLKSKRVPIYEKKYGQVPMCDAGEQCAVRKGARIGKLCDCPRGTSCNSFLLKCL 70 80 90 100 110 116 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 04:28:01 2016 done: Sun Nov 6 04:28:01 2016 Total Scan time: 1.480 Total Display time: -0.030 Function used was FASTA [36.3.4 Apr, 2011]