FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE6526, 150 aa 1>>>pF1KE6526 150 - 150 aa - 150 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.4741+/-0.000589; mu= 11.1148+/- 0.036 mean_var=62.3138+/-12.638, 0's: 0 Z-trim(112.3): 12 B-trim: 443 in 1/49 Lambda= 0.162473 statistics sampled from 13032 (13044) to 13032 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.777), E-opt: 0.2 (0.401), width: 16 Scan time: 1.290 The best scores are: opt bits E(32554) CCDS3961.1 HSPB3 gene_id:8988|Hs108|chr5 ( 150) 1001 242.2 9e-65 CCDS8352.1 HSPB2 gene_id:3316|Hs108|chr11 ( 182) 240 63.9 5.3e-11 >>CCDS3961.1 HSPB3 gene_id:8988|Hs108|chr5 (150 aa) initn: 1001 init1: 1001 opt: 1001 Z-score: 1276.4 bits: 242.2 E(32554): 9e-65 Smith-Waterman score: 1001; 100.0% identity (100.0% similar) in 150 aa overlap (1-150:1-150) 10 20 30 40 50 60 pF1KE6 MAKIILRHLIEIPVRYQEEFEARGLEDCRLDHALYALPGPTIVDLRKTRAAQSPPVDSAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS39 MAKIILRHLIEIPVRYQEEFEARGLEDCRLDHALYALPGPTIVDLRKTRAAQSPPVDSAA 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 ETPPREGKSHFQILLDVVQFLPEDIIIQTFEGWLLIKAQHGTRMDEHGFISRSFTRQYKL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS39 ETPPREGKSHFQILLDVVQFLPEDIIIQTFEGWLLIKAQHGTRMDEHGFISRSFTRQYKL 70 80 90 100 110 120 130 140 150 pF1KE6 PDGVEIKDLSAVLCHDGILVVEVKDPVGTK :::::::::::::::::::::::::::::: CCDS39 PDGVEIKDLSAVLCHDGILVVEVKDPVGTK 130 140 150 >>CCDS8352.1 HSPB2 gene_id:3316|Hs108|chr11 (182 aa) initn: 257 init1: 236 opt: 240 Z-score: 311.0 bits: 63.9 E(32554): 5.3e-11 Smith-Waterman score: 240; 37.5% identity (66.3% similar) in 104 aa overlap (47-150:50-151) 20 30 40 50 60 70 pF1KE6 QEEFEARGLEDCRLDHALYALPGPTIVDLRKTRAAQSPPVDSAAETPPREGKSHFQILLD . ::: . . :. . : ....:: .:: CCDS83 NPSRLGEQRFGEGLLPEEILTPTLYHGYYVRPRAAPAGEGSRAGASELRLSEGKFQAFLD 20 30 40 50 60 70 80 90 100 110 120 130 pF1KE6 VVQFLPEDIIIQTFEGWLLIKAQHGTRMDEHGFISRSFTRQYKLPDGVEIKDLSAVLCHD : .: :... ..: .. : ..:.: :.:.:::.:: : : : :: :. . :.: :: CCDS83 VSHFTPDEVTVRTVDNLLEVSARHPQRLDRHGFVSREFCRTYVLPADVDPWRVRAALSHD 80 90 100 110 120 130 140 150 pF1KE6 GILVVEVKDPVGTK ::: .:. : : . CCDS83 GILNLEA--PRGGRHLDTEVNEVYISLLPAPPDPEEEEEAAIVEP 140 150 160 170 180 150 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 14:06:37 2016 done: Tue Nov 8 14:06:37 2016 Total Scan time: 1.290 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]