FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE4050, 293 aa 1>>>pF1KE4050 293 - 293 aa - 293 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.2844+/-0.00105; mu= 15.0371+/- 0.063 mean_var=58.1522+/-11.597, 0's: 0 Z-trim(102.2): 27 B-trim: 3 in 1/48 Lambda= 0.168187 statistics sampled from 6840 (6850) to 6840 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.571), E-opt: 0.2 (0.21), width: 16 Scan time: 1.910 The best scores are: opt bits E(32554) CCDS3752.1 ELMOD2 gene_id:255520|Hs108|chr4 ( 293) 1990 491.4 3.3e-139 CCDS44724.1 ELMOD1 gene_id:55531|Hs108|chr11 ( 326) 712 181.3 8.1e-46 CCDS76472.1 ELMOD1 gene_id:55531|Hs108|chr11 ( 328) 712 181.3 8.2e-46 CCDS44723.1 ELMOD1 gene_id:55531|Hs108|chr11 ( 334) 712 181.3 8.3e-46 >>CCDS3752.1 ELMOD2 gene_id:255520|Hs108|chr4 (293 aa) initn: 1990 init1: 1990 opt: 1990 Z-score: 2612.6 bits: 491.4 E(32554): 3.3e-139 Smith-Waterman score: 1990; 100.0% identity (100.0% similar) in 293 aa overlap (1-293:1-293) 10 20 30 40 50 60 pF1KE4 MFISLWEFFYGHFFRFWMKWLLRQMTGKCELQRIFDTYVGAQRTHRIENSLTYSKNKVLQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS37 MFISLWEFFYGHFFRFWMKWLLRQMTGKCELQRIFDTYVGAQRTHRIENSLTYSKNKVLQ 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE4 KATHVVQSEVDKYVDDIMKEKNINPEKDASFKICMKMCLLQITGYKQLYLDVESVRKRPY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS37 KATHVVQSEVDKYVDDIMKEKNINPEKDASFKICMKMCLLQITGYKQLYLDVESVRKRPY 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE4 DSDNLQHEELLMKLWNLLMPTKKLNARISKQWAEIGFQGDDPKTDFRGMGILGLINLVYF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS37 DSDNLQHEELLMKLWNLLMPTKKLNARISKQWAEIGFQGDDPKTDFRGMGILGLINLVYF 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE4 SENYTSEAHQILSRSNHPKLGYSYAIVGINLTEMAYSLLKSEALKFHLYNLVPGIPTMEH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS37 SENYTSEAHQILSRSNHPKLGYSYAIVGINLTEMAYSLLKSEALKFHLYNLVPGIPTMEH 190 200 210 220 230 240 250 260 270 280 290 pF1KE4 FHQFYCYLVYEFDKFWFEEEPESIMYFNLYREKFHEKIKGLLLDCNVALTLKV ::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS37 FHQFYCYLVYEFDKFWFEEEPESIMYFNLYREKFHEKIKGLLLDCNVALTLKV 250 260 270 280 290 >>CCDS44724.1 ELMOD1 gene_id:55531|Hs108|chr11 (326 aa) initn: 1031 init1: 612 opt: 712 Z-score: 936.0 bits: 181.3 E(32554): 8.1e-46 Smith-Waterman score: 1015; 50.8% identity (76.2% similar) in 307 aa overlap (1-289:7-313) 10 20 30 40 50 pF1KE4 MFISLWEFFYGHFFRFWMKWLLRQMTGKCELQRI-FDTYVGAQRTHRIENSLTY :.:.. .:: .:. .:...:..::.:::::: ..: ::.:: .::.:: CCDS44 MKHFLRMLIQVCLYFYCKFLWRCLKFVMRKLTGRCELQRICYNTKPGASRTMKIETSLRD 10 20 30 40 50 60 60 70 80 90 100 110 pF1KE4 SKNKVLQKATHVVQSEVDKYVDDIMKEKNINPEKDASFKICMKMCLLQITGYKQLYLDVE ::.:.:: .. : . ..: ..:::. :.:::. . .. : .. :::::.::..: ::: CCDS44 SKSKLLQTSVSVHPDAIEKTIEDIMELKKINPDVNPQLGISLQACLLQIVGYRNLIADVE 70 80 90 100 110 120 120 130 140 150 160 170 pF1KE4 SVRKRPYDSDNLQHEELLMKLWNLLMPTKKLNARISKQWAEIGFQGDDPKTDFRGMGILG ..:.. ::::: ::::.:.:::..: :. :..:::::: :::::::::::::::::.:: CCDS44 KLRREAYDSDNPQHEEMLLKLWKFLKPNTPLESRISKQWCEIGFQGDDPKTDFRGMGLLG 130 140 150 160 170 180 180 190 200 210 pF1KE4 LINLVYFSENYTSEAHQILSRSNHPK-----------------LGYSYAIVGINLTEMAY : :: ::.: .. :.:.:: : ::: .:::.::::::.:..:: CCDS44 LYNLQYFAERDATAAQQVLSDSLHPKCSKFSKAEWEKKRMDKAIGYSFAIVGINITDLAY 190 200 210 220 230 240 220 230 240 250 260 270 pF1KE4 SLLKSEALKFHLYNLVPGIPTMEHFHQFYCYLVYEFDKFWFEEEPESIMYFNLYREKFHE .:: : ::: :.::..: ::. ::.: .:::..:: :::.::.: .:: :: ::::.. CCDS44 NLLVSGALKTHFYNIAPEAPTLSHFQQTFCYLMHEFHKFWIEEDPMDIMEFNRVREKFRK 250 260 270 280 290 300 280 290 pF1KE4 KIKGLLLDCNVALTLKV .: : . ..:: CCDS44 RIIKQLQNPDMALCPHFAASEGLINM 310 320 >>CCDS76472.1 ELMOD1 gene_id:55531|Hs108|chr11 (328 aa) initn: 1031 init1: 612 opt: 712 Z-score: 936.0 bits: 181.3 E(32554): 8.2e-46 Smith-Waterman score: 999; 49.5% identity (74.3% similar) in 315 aa overlap (1-289:1-315) 10 20 30 40 50 pF1KE4 MFISLWEFFYGHFFRFWMKWLLRQMTGKCELQRI-FDTYVGAQRTHRIENSLTYSKNKVL :.:.. .:: .:. .:...:..::.:::::: ..: ::.:: .::.:: ::.:.: CCDS76 MLIQVCLYFYCKFLWRCLKFVMRKLTGRCELQRICYNTKPGASRTMKIETSLRDSKSKLL 10 20 30 40 50 60 60 70 80 90 100 110 pF1KE4 QKATHVVQSEVDKYVDDIMKEKNINPEKDASFKICMKMCLLQITGYKQLYLDVESVRKRP : .. : . ..: ..:::. :.:::. . .. : .. :::::.::..: :::..:.. CCDS76 QTSVSVHPDAIEKTIEDIMELKKINPDVNPQLGISLQACLLQIVGYRNLIADVEKLRREA 70 80 90 100 110 120 120 130 140 150 160 170 pF1KE4 YDSDNLQHEELLMKLWNLLMPTKKLNARISKQWAEIGFQGDDPKTDFRGMGILGLINLVY ::::: ::::.:.:::..: :. :..:::::: :::::::::::::::::.::: :: : CCDS76 YDSDNPQHEEMLLKLWKFLKPNTPLESRISKQWCEIGFQGDDPKTDFRGMGLLGLYNLQY 130 140 150 160 170 180 180 190 200 210 pF1KE4 FSENYTSEAHQILSRSNHPK-------------------------LGYSYAIVGINLTEM :.: .. :.:.:: : ::: .:::.::::::.:.. CCDS76 FAERDATAAQQVLSDSLHPKCRDITKEEISKFSKAEWEKKRMDKAIGYSFAIVGINITDL 190 200 210 220 230 240 220 230 240 250 260 270 pF1KE4 AYSLLKSEALKFHLYNLVPGIPTMEHFHQFYCYLVYEFDKFWFEEEPESIMYFNLYREKF ::.:: : ::: :.::..: ::. ::.: .:::..:: :::.::.: .:: :: :::: CCDS76 AYNLLVSGALKTHFYNIAPEAPTLSHFQQTFCYLMHEFHKFWIEEDPMDIMEFNRVREKF 250 260 270 280 290 300 280 290 pF1KE4 HEKIKGLLLDCNVALTLKV ...: : . ..:: CCDS76 RKRIIKQLQNPDMALCPHFAASEGLINM 310 320 >>CCDS44723.1 ELMOD1 gene_id:55531|Hs108|chr11 (334 aa) initn: 1031 init1: 612 opt: 712 Z-score: 935.8 bits: 181.3 E(32554): 8.3e-46 Smith-Waterman score: 999; 49.5% identity (74.3% similar) in 315 aa overlap (1-289:7-321) 10 20 30 40 50 pF1KE4 MFISLWEFFYGHFFRFWMKWLLRQMTGKCELQRI-FDTYVGAQRTHRIENSLTY :.:.. .:: .:. .:...:..::.:::::: ..: ::.:: .::.:: CCDS44 MKHFLRMLIQVCLYFYCKFLWRCLKFVMRKLTGRCELQRICYNTKPGASRTMKIETSLRD 10 20 30 40 50 60 60 70 80 90 100 110 pF1KE4 SKNKVLQKATHVVQSEVDKYVDDIMKEKNINPEKDASFKICMKMCLLQITGYKQLYLDVE ::.:.:: .. : . ..: ..:::. :.:::. . .. : .. :::::.::..: ::: CCDS44 SKSKLLQTSVSVHPDAIEKTIEDIMELKKINPDVNPQLGISLQACLLQIVGYRNLIADVE 70 80 90 100 110 120 120 130 140 150 160 170 pF1KE4 SVRKRPYDSDNLQHEELLMKLWNLLMPTKKLNARISKQWAEIGFQGDDPKTDFRGMGILG ..:.. ::::: ::::.:.:::..: :. :..:::::: :::::::::::::::::.:: CCDS44 KLRREAYDSDNPQHEEMLLKLWKFLKPNTPLESRISKQWCEIGFQGDDPKTDFRGMGLLG 130 140 150 160 170 180 180 190 200 pF1KE4 LINLVYFSENYTSEAHQILSRSNHPK-------------------------LGYSYAIVG : :: ::.: .. :.:.:: : ::: .:::.:::: CCDS44 LYNLQYFAERDATAAQQVLSDSLHPKCRDITKEEISKFSKAEWEKKRMDKAIGYSFAIVG 190 200 210 220 230 240 210 220 230 240 250 260 pF1KE4 INLTEMAYSLLKSEALKFHLYNLVPGIPTMEHFHQFYCYLVYEFDKFWFEEEPESIMYFN ::.:..::.:: : ::: :.::..: ::. ::.: .:::..:: :::.::.: .:: :: CCDS44 INITDLAYNLLVSGALKTHFYNIAPEAPTLSHFQQTFCYLMHEFHKFWIEEDPMDIMEFN 250 260 270 280 290 300 270 280 290 pF1KE4 LYREKFHEKIKGLLLDCNVALTLKV ::::...: : . ..:: CCDS44 RVREKFRKRIIKQLQNPDMALCPHFAASEGLINM 310 320 330 293 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 04:01:53 2016 done: Sun Nov 6 04:01:53 2016 Total Scan time: 1.910 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]